RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 HAMPP81172 84 aa3.63□□□□□ -1.83
CASC3-202ENST00000394114 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.63□□□□□ -1.83
CASC3-202ENST00000394114 A6NN06 94 aa3.62□□□□□ -1.83
CASC3-202ENST00000394114 OBSCN-AS1Q96MR7 158 aa3.61□□□□□ -1.83
CASC3-202ENST00000394114 JMJD7-PLA2G4BH0Y9G9 81 aa3.61□□□□□ -1.83
CASC3-202ENST00000394114 CAMK2N1Q7Z7J9 78 aa3.61□□□□□ -1.83
CASC3-202ENST00000394114 ATP5EP56381 51 aaPredicted RBP3.6□□□□□ -1.83
CASC3-202ENST00000394114 LCE6AA0A183 80 aa3.59□□□□□ -1.83
CASC3-202ENST00000394114 KRTAP10-1P60331 282 aa3.59□□□□□ -1.83
CASC3-202ENST00000394114 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
CASC3-202ENST00000394114 ATP11AUNQ6ZP68 121 aa3.58□□□□□ -1.84
CASC3-202ENST00000394114 PLAC8Q9NZF1 115 aa3.58□□□□□ -1.84
CASC3-202ENST00000394114 PSORS1C2Q9UIG4 136 aa3.58□□□□□ -1.84
CASC3-202ENST00000394114 A0A0G2JQZ4 141 aa3.58□□□□□ -1.84
CASC3-202ENST00000394114 KLKP1Q107X0 134 aa3.58□□□□□ -1.84
CASC3-202ENST00000394114 LINC00846Q9NV44 126 aa3.58□□□□□ -1.84
CASC3-202ENST00000394114 HCG22E2RYF7 251 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 BCE1O60756 84 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 Q1T7F1 81 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 C1orf137Q5JT78 98 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 Q6ZQT0 140 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 SCXQ7RTU7 201 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 CIRBP-AS1Q8TBR5 109 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 LRP1BQ9NZR2 4599 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 IGLV5-48A0A075B6I7 105 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 ADM2Q7Z4H4 148 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 TRAV22A0A0B4J277 110 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 H3BQ85 93 aa3.57□□□□□ -1.84
CASC3-202ENST00000394114 TRBV7-4A0A0J9YYF1 115 aa3.56□□□□□ -1.84
CASC3-202ENST00000394114 LOC110117498A0A087WWA1 95 aa3.56□□□□□ -1.84
CASC3-202ENST00000394114 Q6JHZ5 121 aa3.55□□□□□ -1.84
CASC3-202ENST00000394114 KRTAP13-1Q8IUC0 172 aa3.55□□□□□ -1.84
CASC3-202ENST00000394114 CHKB-CPT1BH3BT56 60 aa3.55□□□□□ -1.84
CASC3-202ENST00000394114 NDUFC1O43677 76 aa3.55□□□□□ -1.84
CASC3-202ENST00000394114 RETNLBQ9BQ08 111 aa3.55□□□□□ -1.84
CASC3-202ENST00000394114 DYNC1H1Q14204 4646 aaKnown RBP3.55□□□□□ -1.84
CASC3-202ENST00000394114 ANAPC11Q9NYG5 84 aa3.54□□□□□ -1.84
CASC3-202ENST00000394114 UBR4Q5T4S7 5183 aa3.54□□□□□ -1.84
CASC3-202ENST00000394114 TRAV7A0A075B6U4 112 aa3.54□□□□□ -1.84
CASC3-202ENST00000394114 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
CASC3-202ENST00000394114 KRTAP16-1A8MUX0 517 aa3.54□□□□□ -1.84
CASC3-202ENST00000394114 Q6ZSA8 131 aa3.53□□□□□ -1.84
CASC3-202ENST00000394114 C8orf17Q9NRJ1 99 aa3.53□□□□□ -1.84
CASC3-202ENST00000394114 KIAA1109Q2LD37 5005 aa3.53□□□□□ -1.84
CASC3-202ENST00000394114 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.84
CASC3-202ENST00000394114 PDE6GP18545 87 aa3.53□□□□□ -1.84
CASC3-202ENST00000394114 A0A1W2PNM2 257 aa3.52□□□□□ -1.85
CASC3-202ENST00000394114 ZNF861PO60384 105 aa3.52□□□□□ -1.85
CASC3-202ENST00000394114 UBL5Q9BZL1 73 aa3.52□□□□□ -1.85
CASC3-202ENST00000394114 IGLV7-43P04211 117 aa3.52□□□□□ -1.85
CASC3-202ENST00000394114 IGFL1Q6UW32 110 aa3.52□□□□□ -1.85
CASC3-202ENST00000394114 FAT1Q14517 4588 aa3.52□□□□□ -1.85
CASC3-202ENST00000394114 KRTAP4-8A0A0G2JLE6 195 aa3.51□□□□□ -1.85
CASC3-202ENST00000394114 SPRR4Q96PI1 79 aa3.51□□□□□ -1.85
CASC3-202ENST00000394114 Q5VV11 94 aa3.51□□□□□ -1.85
CASC3-202ENST00000394114 SMR3BP02814 79 aaPredicted RBP3.51□□□□□ -1.85
CASC3-202ENST00000394114 HERC2O95714 4834 aa3.5□□□□□ -1.85
CASC3-202ENST00000394114 A0A1B0GVX0 72 aa3.5□□□□□ -1.85
CASC3-202ENST00000394114 A0A1B0GVY2 172 aa3.5□□□□□ -1.85
CASC3-202ENST00000394114 SPRR1BP22528 89 aa3.5□□□□□ -1.85
CASC3-202ENST00000394114 hDV103S1A0JD37 113 aa3.49□□□□□ -1.85
CASC3-202ENST00000394114 APOBP04114 4563 aaKnown RBP3.49□□□□□ -1.85
CASC3-202ENST00000394114 FLG2Q5D862 2391 aaPredicted RBP3.49□□□□□ -1.85
CASC3-202ENST00000394114 A6NED7 52 aa3.49□□□□□ -1.85
CASC3-202ENST00000394114 MOBPQ13875 183 aa3.49□□□□□ -1.85
CASC3-202ENST00000394114 NREPQ16612 68 aa3.49□□□□□ -1.85
CASC3-202ENST00000394114 IGKV2D-30A0A075B6S6 120 aa3.48□□□□□ -1.85
CASC3-202ENST00000394114 A0A087WSZ3 146 aa3.48□□□□□ -1.85
CASC3-202ENST00000394114 BPY2O14599 106 aa3.48□□□□□ -1.85
CASC3-202ENST00000394114 Q8N9L7 120 aa3.48□□□□□ -1.85
CASC3-202ENST00000394114 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
CASC3-202ENST00000394114 DEFB116Q30KQ4 102 aa3.48□□□□□ -1.85
CASC3-202ENST00000394114 LINC00483Q53H64 154 aa3.47□□□□□ -1.85
CASC3-202ENST00000394114 ATP5EP2Q5VTU8 51 aa3.46□□□□□ -1.85
CASC3-202ENST00000394114 TYMSOSQ8TAI1 123 aa3.46□□□□□ -1.85
CASC3-202ENST00000394114 C1orf64Q8NEQ6 169 aa3.46□□□□□ -1.86
CASC3-202ENST00000394114 TMEM254Q8TBM7 123 aa3.45□□□□□ -1.86
CASC3-202ENST00000394114 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
CASC3-202ENST00000394114 RPL37AP61513 92 aaKnown RBP3.45□□□□□ -1.86
CASC3-202ENST00000394114 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
CASC3-202ENST00000394114 Q8N9P0 234 aaPredicted RBP3.44□□□□□ -1.86
CASC3-202ENST00000394114 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
CASC3-202ENST00000394114 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
CASC3-202ENST00000394114 A0A1B0GW54 56 aa3.43□□□□□ -1.86
CASC3-202ENST00000394114 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
CASC3-202ENST00000394114 DSCR10P59022 87 aa3.42□□□□□ -1.86
CASC3-202ENST00000394114 HSPG2P98160 4391 aa3.42□□□□□ -1.86
CASC3-202ENST00000394114 K7EQZ3 153 aa3.42□□□□□ -1.86
CASC3-202ENST00000394114 IGKV4-1P06312 121 aa3.42□□□□□ -1.86
CASC3-202ENST00000394114 KRTAP1-4P0C5Y4 121 aa3.42□□□□□ -1.86
CASC3-202ENST00000394114 KRTAP13-2Q52LG2 175 aa3.42□□□□□ -1.86
CASC3-202ENST00000394114 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
CASC3-202ENST00000394114 LRP1Q07954 4544 aaKnown RBP3.4□□□□□ -1.86
CASC3-202ENST00000394114 CYP4F30PQ9H0H9 118 aa3.4□□□□□ -1.86
CASC3-202ENST00000394114 ROMO1P60602 79 aa3.4□□□□□ -1.87
CASC3-202ENST00000394114 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.87
CASC3-202ENST00000394114 SPINK6Q6UWN8 80 aa3.4□□□□□ -1.87
CASC3-202ENST00000394114 CASC2Q6XLA1 102 aa3.4□□□□□ -1.87
CASC3-202ENST00000394114 KRTAP10-4P60372 401 aaPredicted RBP3.39□□□□□ -1.87
CASC3-202ENST00000394114 CSAG1Q6PB30 78 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms