RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 PLGLAQ15195 96 aa-0.55□□□□□ -2.5
MDM2-208ENST00000393410 PYY3Q5JQD4 70 aa-0.55□□□□□ -2.5
MDM2-208ENST00000393410 KRTAP8-1Q8IUC2 63 aa-0.55□□□□□ -2.5
MDM2-208ENST00000393410 S100A16Q96FQ6 103 aaKnown RBP-0.55□□□□□ -2.5
MDM2-208ENST00000393410 GAFA1Q96PS6 74 aa-0.55□□□□□ -2.5
MDM2-208ENST00000393410 V9GYS6 101 aa-0.55□□□□□ -2.5
MDM2-208ENST00000393410 TLN2Q9Y4G6 2542 aa-0.56□□□□□ -2.5
MDM2-208ENST00000393410 MGAQ8IWI9 3026 aa-0.56□□□□□ -2.5
MDM2-208ENST00000393410 SMARCA2P51531 1590 aa-0.56□□□□□ -2.5
MDM2-208ENST00000393410 CDC42BPGQ6DT37 1551 aa-0.56□□□□□ -2.5
MDM2-208ENST00000393410 KRTAP19-5Q3LI72 72 aa-0.56□□□□□ -2.5
MDM2-208ENST00000393410 MT1LQ93083 61 aa-0.56□□□□□ -2.5
MDM2-208ENST00000393410 CENPEQ02224 2701 aa-0.56□□□□□ -2.5
MDM2-208ENST00000393410 SPTAN1Q13813 2472 aaKnown RBP-0.56□□□□□ -2.5
MDM2-208ENST00000393410 NCOA2Q15596 1464 aa-0.56□□□□□ -2.5
MDM2-208ENST00000393410 USP34Q70CQ2 3546 aa-0.56□□□□□ -2.5
MDM2-208ENST00000393410 PLIN4Q96Q06 1357 aa-0.57□□□□□ -2.5
MDM2-208ENST00000393410 DNAH14Q0VDD8 3507 aa-0.57□□□□□ -2.5
MDM2-208ENST00000393410 TJP1Q07157 1748 aa-0.57□□□□□ -2.5
MDM2-208ENST00000393410 DDX60LQ5H9U9 1706 aaKnown RBP-0.57□□□□□ -2.5
MDM2-208ENST00000393410 RICTORQ6R327 1708 aa-0.57□□□□□ -2.5
MDM2-208ENST00000393410 SMR3BP02814 79 aaPredicted RBP-0.57□□□□□ -2.5
MDM2-208ENST00000393410 Q9H521 79 aa-0.57□□□□□ -2.5
MDM2-208ENST00000393410 ASPMQ8IZT6 3477 aa-0.58□□□□□ -2.5
MDM2-208ENST00000393410 CFAP43Q8NDM7 1665 aa-0.58□□□□□ -2.5
MDM2-208ENST00000393410 PCNTO95613 3336 aa-0.58□□□□□ -2.5
MDM2-208ENST00000393410 CYB5AP00167 134 aa-0.58□□□□□ -2.5
MDM2-208ENST00000393410 MT1FP04733 61 aa-0.58□□□□□ -2.5
MDM2-208ENST00000393410 DEFB1P60022 68 aa-0.58□□□□□ -2.5
MDM2-208ENST00000393410 CFAP54Q96N23 3096 aa-0.58□□□□□ -2.5
MDM2-208ENST00000393410 WIZO95785 1651 aa-0.59□□□□□ -2.5
MDM2-208ENST00000393410 MED14O60244 1454 aa-0.59□□□□□ -2.5
MDM2-208ENST00000393410 MAGI3Q5TCQ9 1506 aa-0.59□□□□□ -2.5
MDM2-208ENST00000393410 BRCA2P51587 3418 aa-0.6□□□□□ -2.5
MDM2-208ENST00000393410 PLXNC1O60486 1568 aa-0.6□□□□□ -2.51
MDM2-208ENST00000393410 PVALEFA0A1B0GWK0 134 aa-0.6□□□□□ -2.51
MDM2-208ENST00000393410 SMIM11AP58511 58 aa-0.6□□□□□ -2.51
MDM2-208ENST00000393410 SNRPFP62306 86 aaKnown RBP-0.6□□□□□ -2.51
MDM2-208ENST00000393410 LINC00643Q86TS7 51 aa-0.6□□□□□ -2.51
MDM2-208ENST00000393410 ASXL1Q8IXJ9 1541 aa-0.6□□□□□ -2.51
MDM2-208ENST00000393410 CENPFP49454 3210 aa-0.6□□□□□ -2.51
MDM2-208ENST00000393410 CFAP47Q6ZTR5 3102 aa-0.61□□□□□ -2.51
MDM2-208ENST00000393410 WFDC9Q8NEX5 89 aa-0.61□□□□□ -2.51
MDM2-208ENST00000393410 RABAC1Q9UI14 185 aa-0.61□□□□□ -2.51
MDM2-208ENST00000393410 CEP290O15078 2479 aa-0.61□□□□□ -2.51
MDM2-208ENST00000393410 CEBPZOSA8MTT3 80 aa-0.62□□□□□ -2.51
MDM2-208ENST00000393410 DNAH12Q6ZR08 3092 aa-0.62□□□□□ -2.51
MDM2-208ENST00000393410 FRYLO94915 3013 aa-0.63□□□□□ -2.51
MDM2-208ENST00000393410 CDH23Q9H251 3354 aa-0.63□□□□□ -2.51
MDM2-208ENST00000393410 CDC42BPAQ5VT25 1732 aa-0.64□□□□□ -2.51
MDM2-208ENST00000393410 RB1CC1Q8TDY2 1594 aa-0.64□□□□□ -2.51
MDM2-208ENST00000393410 H3BNG1 76 aa-0.64□□□□□ -2.51
MDM2-208ENST00000393410 IFI6P09912 130 aa-0.64□□□□□ -2.51
MDM2-208ENST00000393410 S4R3F8 94 aa-0.64□□□□□ -2.51
MDM2-208ENST00000393410 UTRNP46939 3433 aa-0.64□□□□□ -2.51
MDM2-208ENST00000393410 MAP3K1Q13233 1512 aa-0.64□□□□□ -2.51
MDM2-208ENST00000393410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.64□□□□□ -2.51
MDM2-208ENST00000393410 ANKRD50Q9ULJ7 1429 aa-0.64□□□□□ -2.51
MDM2-208ENST00000393410 DEFB4AO15263 64 aa-0.65□□□□□ -2.51
MDM2-208ENST00000393410 GNG2P59768 71 aa-0.65□□□□□ -2.51
MDM2-208ENST00000393410 ITSN1Q15811 1721 aa-0.65□□□□□ -2.51
MDM2-208ENST00000393410 PARP4Q9UKK3 1724 aaKnown RBP-0.65□□□□□ -2.51
MDM2-208ENST00000393410 URB2Q14146 1524 aaKnown RBP-0.65□□□□□ -2.51
MDM2-208ENST00000393410 VPS13AQ96RL7 3174 aa-0.66□□□□□ -2.51
MDM2-208ENST00000393410 COX6B2Q6YFQ2 88 aa-0.66□□□□□ -2.52
MDM2-208ENST00000393410 RPS29P62273 56 aaKnown RBP-0.67□□□□□ -2.52
MDM2-208ENST00000393410 DEFB110Q30KQ9 67 aa-0.67□□□□□ -2.52
MDM2-208ENST00000393410 KRTAP19-2Q3LHN2 52 aa-0.67□□□□□ -2.52
MDM2-208ENST00000393410 UACAQ9BZF9 1416 aa-0.67□□□□□ -2.52
MDM2-208ENST00000393410 XIRP2A4UGR9 3374 aa-0.67□□□□□ -2.52
MDM2-208ENST00000393410 GOLGB1Q14789 3259 aaKnown RBP-0.68□□□□□ -2.52
MDM2-208ENST00000393410 C9orf92A6NGG3 77 aa-0.68□□□□□ -2.52
MDM2-208ENST00000393410 DCAF1Q9Y4B6 1507 aa-0.69□□□□□ -2.52
MDM2-208ENST00000393410 LRRIQ1Q96JM4 1722 aa-0.69□□□□□ -2.52
MDM2-208ENST00000393410 LCE6AA0A183 80 aa-0.69□□□□□ -2.52
MDM2-208ENST00000393410 ACYP1P07311 99 aa-0.69□□□□□ -2.52
MDM2-208ENST00000393410 ERVK-7P63135 1459 aa-0.69□□□□□ -2.52
MDM2-208ENST00000393410 NRAPQ86VF7 1730 aa-0.69□□□□□ -2.52
MDM2-208ENST00000393410 RNF17Q9BXT8 1623 aaKnown RBP-0.7□□□□□ -2.52
MDM2-208ENST00000393410 HMGA1P17096 107 aaKnown RBP-0.7□□□□□ -2.52
MDM2-208ENST00000393410 LINC00158P58513 81 aa-0.7□□□□□ -2.52
MDM2-208ENST00000393410 RPL38P63173 70 aaKnown RBP-0.7□□□□□ -2.52
MDM2-208ENST00000393410 CLPSL2Q6UWE3 100 aa-0.7□□□□□ -2.52
MDM2-208ENST00000393410 ZC3H13Q5T200 1668 aaKnown RBP-0.7□□□□□ -2.52
MDM2-208ENST00000393410 ANKRD36CQ5JPF3 1778 aa-0.7□□□□□ -2.52
MDM2-208ENST00000393410 DEPDC5O75140 1603 aa-0.71□□□□□ -2.52
MDM2-208ENST00000393410 H0YGG7 62 aa-0.71□□□□□ -2.52
MDM2-208ENST00000393410 DEFB121Q5J5C9 76 aa-0.71□□□□□ -2.52
MDM2-208ENST00000393410 PRO3102Q9H379 93 aa-0.71□□□□□ -2.52
MDM2-208ENST00000393410 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.71□□□□□ -2.52
MDM2-208ENST00000393410 CD163L1Q9NR16 1453 aa-0.72□□□□□ -2.52
MDM2-208ENST00000393410 ST20Q9HBF5 79 aa-0.72□□□□□ -2.52
MDM2-208ENST00000393410 CEP250Q9BV73 2442 aa-0.72□□□□□ -2.52
MDM2-208ENST00000393410 CFAP74Q9C0B2 1584 aa-0.73□□□□□ -2.53
MDM2-208ENST00000393410 UMAD1C9J7I0 102 aa-0.73□□□□□ -2.53
MDM2-208ENST00000393410 H3BUT2 72 aa-0.73□□□□□ -2.53
MDM2-208ENST00000393410 NREPQ16612 68 aa-0.73□□□□□ -2.53
MDM2-208ENST00000393410 NDUFA4O00483 81 aa-0.74□□□□□ -2.53
MDM2-208ENST00000393410 NDUFB1O75438 58 aa-0.74□□□□□ -2.53
MDM2-208ENST00000393410 ARHGAP35Q9NRY4 1499 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms