RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 WFDC13Q8IUB5 93 aa9.99□□□□□ -0.81
MBD4-202ENST00000393278 MMP24-AS1A0A0U1RRL7 71 aa9.98□□□□□ -0.81
MBD4-202ENST00000393278 COX7CP15954 63 aa9.98□□□□□ -0.81
MBD4-202ENST00000393278 TRAV7A0A075B6U4 112 aa9.97□□□□□ -0.81
MBD4-202ENST00000393278 IGHV6-1A0A0B4J1U7 121 aa9.97□□□□□ -0.81
MBD4-202ENST00000393278 CASC2Q6XLA1 102 aa9.96□□□□□ -0.81
MBD4-202ENST00000393278 C8orf17Q9NRJ1 99 aa9.96□□□□□ -0.82
MBD4-202ENST00000393278 PCLOQ9Y6V0 5065 aa9.94□□□□□ -0.82
MBD4-202ENST00000393278 CCDC179H3BU77 68 aa9.94□□□□□ -0.82
MBD4-202ENST00000393278 UQCRQO14949 82 aa9.94□□□□□ -0.82
MBD4-202ENST00000393278 OCR1Q9BZK8 76 aa9.94□□□□□ -0.82
MBD4-202ENST00000393278 KRTAP10-8P60410 259 aa9.93□□□□□ -0.82
MBD4-202ENST00000393278 LRP1Q07954 4544 aaKnown RBP9.93□□□□□ -0.82
MBD4-202ENST00000393278 hDV103S1A0JD37 113 aa9.93□□□□□ -0.82
MBD4-202ENST00000393278 FAT3Q8TDW7 4589 aa9.92□□□□□ -0.82
MBD4-202ENST00000393278 NOTCH2NLQ7Z3S9 236 aa9.9□□□□□ -0.82
MBD4-202ENST00000393278 TNXBP22105 4242 aa9.9□□□□□ -0.83
MBD4-202ENST00000393278 C8orf87E5RJ46 101 aa9.88□□□□□ -0.83
MBD4-202ENST00000393278 TMEM254Q8TBM7 123 aa9.85□□□□□ -0.83
MBD4-202ENST00000393278 MRPL34Q9BQ48 92 aaKnown RBP9.83□□□□□ -0.84
MBD4-202ENST00000393278 LINC00313P59037 77 aa9.83□□□□□ -0.84
MBD4-202ENST00000393278 C20orf197Q8N268 126 aa9.8□□□□□ -0.84
MBD4-202ENST00000393278 FLG2Q5D862 2391 aaPredicted RBP9.8□□□□□ -0.84
MBD4-202ENST00000393278 MT1HL1P0DM35 61 aa9.8□□□□□ -0.84
MBD4-202ENST00000393278 KRTAP4-5Q9BYR2 181 aa9.8□□□□□ -0.84
MBD4-202ENST00000393278 MYCBP2O75592 4640 aa9.78□□□□□ -0.84
MBD4-202ENST00000393278 ABCA13Q86UQ4 5058 aa9.77□□□□□ -0.85
MBD4-202ENST00000393278 C5orf47Q569G3 176 aa9.76□□□□□ -0.85
MBD4-202ENST00000393278 TP53AIP1Q9HCN2 124 aa9.76□□□□□ -0.85
MBD4-202ENST00000393278 KRTAP16-1A8MUX0 517 aa9.75□□□□□ -0.85
MBD4-202ENST00000393278 OXTP01178 125 aa9.75□□□□□ -0.85
MBD4-202ENST00000393278 RETNLBQ9BQ08 111 aa9.75□□□□□ -0.85
MBD4-202ENST00000393278 NDUFS5O43920 106 aa9.74□□□□□ -0.85
MBD4-202ENST00000393278 KLKP1Q107X0 134 aa9.74□□□□□ -0.85
MBD4-202ENST00000393278 CYSTM1Q9H1C7 97 aa9.74□□□□□ -0.85
MBD4-202ENST00000393278 SNURFQ9Y675 71 aa9.73□□□□□ -0.85
MBD4-202ENST00000393278 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
MBD4-202ENST00000393278 Q8N9P0 234 aaPredicted RBP9.71□□□□□ -0.85
MBD4-202ENST00000393278 TRAV22A0A0B4J277 110 aa9.69□□□□□ -0.86
MBD4-202ENST00000393278 H0Y9P7 68 aa9.69□□□□□ -0.86
MBD4-202ENST00000393278 MP68P56378 58 aa9.69□□□□□ -0.86
MBD4-202ENST00000393278 H3BPC8 53 aa9.65□□□□□ -0.86
MBD4-202ENST00000393278 ZCCHC13Q8WW36 166 aaKnown RBP9.65□□□□□ -0.86
MBD4-202ENST00000393278 FP248Q71RG6 208 aaPredicted RBP9.64□□□□□ -0.87
MBD4-202ENST00000393278 DMBT1Q9UGM3 2413 aaPredicted RBP9.64□□□□□ -0.87
MBD4-202ENST00000393278 LINC00208Q96KT6 92 aa9.63□□□□□ -0.87
MBD4-202ENST00000393278 C9orf92A6NGG3 77 aa9.62□□□□□ -0.87
MBD4-202ENST00000393278 H7BZZ5 65 aa9.62□□□□□ -0.87
MBD4-202ENST00000393278 NDUFC1O43677 76 aa9.62□□□□□ -0.87
MBD4-202ENST00000393278 Q5W150 140 aa9.61□□□□□ -0.87
MBD4-202ENST00000393278 KRTAP13-3Q3SY46 172 aa9.6□□□□□ -0.87
MBD4-202ENST00000393278 C1orf64Q8NEQ6 169 aa9.58□□□□□ -0.88
MBD4-202ENST00000393278 TMEM258P61165 79 aa9.57□□□□□ -0.88
MBD4-202ENST00000393278 C20orf166-AS1Q96NR2 134 aa9.55□□□□□ -0.88
MBD4-202ENST00000393278 IGLV7-46A0A075B6I9 117 aa9.55□□□□□ -0.88
MBD4-202ENST00000393278 A8MUU9 505 aa9.54□□□□□ -0.88
MBD4-202ENST00000393278 LOC101927531A0A1B0GV80 90 aa9.5□□□□□ -0.89
MBD4-202ENST00000393278 PRR4Q16378 134 aa9.48□□□□□ -0.89
MBD4-202ENST00000393278 FAM236DA0A1B0GTK5 79 aa9.47□□□□□ -0.89
MBD4-202ENST00000393278 J3QL48 77 aa9.47□□□□□ -0.89
MBD4-202ENST00000393278 FAM236CP0DP71 79 aa9.47□□□□□ -0.89
MBD4-202ENST00000393278 Q75L30 129 aa9.46□□□□□ -0.89
MBD4-202ENST00000393278 IGKV2-30P06310 120 aa9.44□□□□□ -0.9
MBD4-202ENST00000393278 CYP4F30PQ9H0H9 118 aa9.43□□□□□ -0.9
MBD4-202ENST00000393278 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
MBD4-202ENST00000393278 HERC1Q15751 4861 aa9.42□□□□□ -0.9
MBD4-202ENST00000393278 ATP5EP56381 51 aaPredicted RBP9.42□□□□□ -0.9
MBD4-202ENST00000393278 XP32Q5T750 250 aa9.4□□□□□ -0.9
MBD4-202ENST00000393278 SPANXA2-OT1Q8N9U9 137 aa9.39□□□□□ -0.91
MBD4-202ENST00000393278 TPRXLQ17RH7 258 aa9.38□□□□□ -0.91
MBD4-202ENST00000393278 RPL37P61927 97 aaKnown RBP9.36□□□□□ -0.91
MBD4-202ENST00000393278 IGKV2D-30A0A075B6S6 120 aa9.36□□□□□ -0.91
MBD4-202ENST00000393278 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
MBD4-202ENST00000393278 C7orf65Q6ZTY9 151 aa9.32□□□□□ -0.92
MBD4-202ENST00000393278 ATP11AUNQ6ZP68 121 aa9.31□□□□□ -0.92
MBD4-202ENST00000393278 HRES1P13985 223 aa9.29□□□□□ -0.92
MBD4-202ENST00000393278 SERP1Q9Y6X1 66 aa9.27□□□□□ -0.93
MBD4-202ENST00000393278 RPS28P62857 69 aaKnown RBP9.26□□□□□ -0.93
MBD4-202ENST00000393278 SPINK7P58062 85 aa9.23□□□□□ -0.93
MBD4-202ENST00000393278 LPAP08519 4548 aa9.22□□□□□ -0.93
MBD4-202ENST00000393278 LRP2P98164 4655 aa9.18□□□□□ -0.94
MBD4-202ENST00000393278 DMAC1Q96GE9 116 aa9.16□□□□□ -0.94
MBD4-202ENST00000393278 C4orf26Q17RF5 130 aa9.11□□□□□ -0.95
MBD4-202ENST00000393278 COA5Q86WW8 74 aa9.1□□□□□ -0.95
MBD4-202ENST00000393278 ACYP2P14621 99 aa9.1□□□□□ -0.95
MBD4-202ENST00000393278 A8MUN3 132 aa9.04□□□□□ -0.96
MBD4-202ENST00000393278 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
MBD4-202ENST00000393278 SMIM26A0A096LP01 95 aa9.03□□□□□ -0.96
MBD4-202ENST00000393278 HMCN2Q8NDA2 5059 aa9.01□□□□□ -0.97
MBD4-202ENST00000393278 COX6B2Q6YFQ2 88 aa9□□□□□ -0.97
MBD4-202ENST00000393278 KRTAP3-1Q9BYR8 98 aa9□□□□□ -0.97
MBD4-202ENST00000393278 CHKB-CPT1BH3BT56 60 aa8.95□□□□□ -0.98
MBD4-202ENST00000393278 MUC17Q685J3 4493 aa8.94□□□□□ -0.98
MBD4-202ENST00000393278 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
MBD4-202ENST00000393278 UBR4Q5T4S7 5183 aa8.9□□□□□ -0.98
MBD4-202ENST00000393278 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
MBD4-202ENST00000393278 Q1T7F1 81 aa8.85□□□□□ -0.99
MBD4-202ENST00000393278 RBM12B-AS1Q9P1G2 102 aa8.85□□□□□ -0.99
MBD4-202ENST00000393278 V9GYY9 64 aa8.81□□□□□ -1
MBD4-202ENST00000393278 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms