RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 KRTAP1-4P0C5Y4 121 aa14.89□□□□□ -0.03
SMARCD3-203ENST00000392811 TP53AIP1Q9HCN2 124 aa14.89□□□□□ -0.03
SMARCD3-203ENST00000392811 C1orf64Q8NEQ6 169 aa14.88□□□□□ -0.03
SMARCD3-203ENST00000392811 MRPL34Q9BQ48 92 aaKnown RBP14.88□□□□□ -0.03
SMARCD3-203ENST00000392811 SMIM26A0A096LP01 95 aa14.87□□□□□ -0.03
SMARCD3-203ENST00000392811 NDUFS5O43920 106 aa14.85□□□□□ -0.03
SMARCD3-203ENST00000392811 VPS13BQ7Z7G8 4022 aa14.83□□□□□ -0.03
SMARCD3-203ENST00000392811 PRR4Q16378 134 aa14.83□□□□□ -0.04
SMARCD3-203ENST00000392811 C4orf26Q17RF5 130 aa14.83□□□□□ -0.04
SMARCD3-203ENST00000392811 FP248Q71RG6 208 aaPredicted RBP14.82□□□□□ -0.04
SMARCD3-203ENST00000392811 LINC00336Q6ZUF6 198 aa14.81□□□□□ -0.04
SMARCD3-203ENST00000392811 CYP4F30PQ9H0H9 118 aa14.8□□□□□ -0.04
SMARCD3-203ENST00000392811 PKHD1P08F94 4074 aa14.79□□□□□ -0.04
SMARCD3-203ENST00000392811 PLA2G1BP04054 148 aaKnown RBP14.75□□□□□ -0.05
SMARCD3-203ENST00000392811 C1orf195Q5TG92 126 aa14.75□□□□□ -0.05
SMARCD3-203ENST00000392811 SPANXA2-OT1Q8N9U9 137 aa14.73□□□□□ -0.05
SMARCD3-203ENST00000392811 C8orf87E5RJ46 101 aa14.71□□□□□ -0.05
SMARCD3-203ENST00000392811 A0A1B0GVY2 172 aa14.7□□□□□ -0.06
SMARCD3-203ENST00000392811 DYNC1H1Q14204 4646 aaKnown RBP14.68□□□□□ -0.06
SMARCD3-203ENST00000392811 TYMSOSQ8TAI1 123 aa14.67□□□□□ -0.06
SMARCD3-203ENST00000392811 LIMD2Q9BT23 127 aa14.66□□□□□ -0.06
SMARCD3-203ENST00000392811 SMR3BP02814 79 aaPredicted RBP14.64□□□□□ -0.07
SMARCD3-203ENST00000392811 LINC00313P59037 77 aa14.64□□□□□ -0.07
SMARCD3-203ENST00000392811 PCOTHQ58A44 107 aa14.64□□□□□ -0.07
SMARCD3-203ENST00000392811 C4orf48Q5BLP8 95 aa14.61□□□□□ -0.07
SMARCD3-203ENST00000392811 Q5W150 140 aa14.61□□□□□ -0.07
SMARCD3-203ENST00000392811 MPLKIPQ8TAP9 179 aa14.61□□□□□ -0.07
SMARCD3-203ENST00000392811 IGLV7-46A0A075B6I9 117 aa14.58□□□□□ -0.08
SMARCD3-203ENST00000392811 KRTAP13-3Q3SY46 172 aa14.58□□□□□ -0.08
SMARCD3-203ENST00000392811 SPINK1P00995 79 aa14.56□□□□□ -0.08
SMARCD3-203ENST00000392811 PRR26Q8N8Z3 221 aa14.56□□□□□ -0.08
SMARCD3-203ENST00000392811 RYR2Q92736 4967 aa14.54□□□□□ -0.08
SMARCD3-203ENST00000392811 Q8N9P0 234 aaPredicted RBP14.52□□□□□ -0.09
SMARCD3-203ENST00000392811 LOC101927531A0A1B0GV80 90 aa14.51□□□□□ -0.09
SMARCD3-203ENST00000392811 SVIPQ8NHG7 77 aa14.5□□□□□ -0.09
SMARCD3-203ENST00000392811 APOBP04114 4563 aaKnown RBP14.5□□□□□ -0.09
SMARCD3-203ENST00000392811 KRTAP16-1A8MUX0 517 aa14.49□□□□□ -0.09
SMARCD3-203ENST00000392811 KRTAP10-4P60372 401 aaPredicted RBP14.48□□□□□ -0.09
SMARCD3-203ENST00000392811 LINC00304Q8N9R0 145 aa14.48□□□□□ -0.09
SMARCD3-203ENST00000392811 FAM229AH3BQW9 127 aa14.42□□□□□ -0.1
SMARCD3-203ENST00000392811 Q1T7F1 81 aa14.42□□□□□ -0.1
SMARCD3-203ENST00000392811 FAT1Q14517 4588 aa14.41□□□□□ -0.1
SMARCD3-203ENST00000392811 RPS29P62273 56 aaKnown RBP14.41□□□□□ -0.1
SMARCD3-203ENST00000392811 SPAG11AQ6PDA7 123 aa14.4□□□□□ -0.1
SMARCD3-203ENST00000392811 COA5Q86WW8 74 aa14.4□□□□□ -0.1
SMARCD3-203ENST00000392811 RETNLBQ9BQ08 111 aa14.4□□□□□ -0.1
SMARCD3-203ENST00000392811 KMT2CQ8NEZ4 4911 aaKnown RBP14.39□□□□□ -0.11
SMARCD3-203ENST00000392811 IGKV2-30P06310 120 aa14.27□□□□□ -0.12
SMARCD3-203ENST00000392811 HRES1P13985 223 aa14.27□□□□□ -0.13
SMARCD3-203ENST00000392811 V9GYY9 64 aa14.25□□□□□ -0.13
SMARCD3-203ENST00000392811 PKHD1L1Q86WI1 4243 aa14.24□□□□□ -0.13
SMARCD3-203ENST00000392811 PSPHP1O15172 72 aa14.24□□□□□ -0.13
SMARCD3-203ENST00000392811 A8MUN3 132 aa14.16□□□□□ -0.14
SMARCD3-203ENST00000392811 IGKV2D-30A0A075B6S6 120 aa14.13□□□□□ -0.15
SMARCD3-203ENST00000392811 BRK1Q8WUW1 75 aa14.13□□□□□ -0.15
SMARCD3-203ENST00000392811 DMAC1Q96GE9 116 aa14.11□□□□□ -0.15
SMARCD3-203ENST00000392811 PRO0628Q9UI54 55 aa14.1□□□□□ -0.15
SMARCD3-203ENST00000392811 ACYP2P14621 99 aa14.09□□□□□ -0.15
SMARCD3-203ENST00000392811 Q5VV11 94 aa14.07□□□□□ -0.16
SMARCD3-203ENST00000392811 C9orf92A6NGG3 77 aa14.06□□□□□ -0.16
SMARCD3-203ENST00000392811 PRR15LQ9BU68 103 aa14.05□□□□□ -0.16
SMARCD3-203ENST00000392811 RYR3Q15413 4870 aa14□□□□□ -0.17
SMARCD3-203ENST00000392811 Q5VSD8 79 aa14□□□□□ -0.17
SMARCD3-203ENST00000392811 LINC01558Q9Y6Z2 57 aa13.98□□□□□ -0.17
SMARCD3-203ENST00000392811 C20orf166-AS1Q96NR2 134 aa13.97□□□□□ -0.17
SMARCD3-203ENST00000392811 HSPG2P98160 4391 aa13.97□□□□□ -0.17
SMARCD3-203ENST00000392811 A8MUU9 505 aa13.97□□□□□ -0.17
SMARCD3-203ENST00000392811 C7orf65Q6ZTY9 151 aa13.95□□□□□ -0.18
SMARCD3-203ENST00000392811 Q8N1X5 172 aa13.95□□□□□ -0.18
SMARCD3-203ENST00000392811 FLG2Q5D862 2391 aaPredicted RBP13.93□□□□□ -0.18
SMARCD3-203ENST00000392811 CHKB-CPT1BH3BT56 60 aa13.92□□□□□ -0.18
SMARCD3-203ENST00000392811 KRTAP10-8P60410 259 aa13.9□□□□□ -0.18
SMARCD3-203ENST00000392811 Q75L30 129 aa13.9□□□□□ -0.18
SMARCD3-203ENST00000392811 LRP1Q07954 4544 aaKnown RBP13.87□□□□□ -0.19
SMARCD3-203ENST00000392811 TNXBP22105 4242 aa13.85□□□□□ -0.19
SMARCD3-203ENST00000392811 RYR1P21817 5038 aa13.84□□□□□ -0.19
SMARCD3-203ENST00000392811 KRTAP17-1Q9BYP8 105 aa13.83□□□□□ -0.2
SMARCD3-203ENST00000392811 FAT3Q8TDW7 4589 aa13.79□□□□□ -0.2
SMARCD3-203ENST00000392811 A6NED7 52 aa13.74□□□□□ -0.21
SMARCD3-203ENST00000392811 A8MU10 97 aa13.73□□□□□ -0.21
SMARCD3-203ENST00000392811 SPINK7P58062 85 aa13.66□□□□□ -0.22
SMARCD3-203ENST00000392811 KIAA1109Q2LD37 5005 aa13.66□□□□□ -0.22
SMARCD3-203ENST00000392811 LCA10Q71F78 164 aa13.64□□□□□ -0.23
SMARCD3-203ENST00000392811 A0A1B0GU69 56 aa13.57□□□□□ -0.24
SMARCD3-203ENST00000392811 MT1HL1P0DM35 61 aa13.57□□□□□ -0.24
SMARCD3-203ENST00000392811 DMBT1Q9UGM3 2413 aaPredicted RBP13.57□□□□□ -0.24
SMARCD3-203ENST00000392811 CDC42SE1Q9NRR8 79 aa13.56□□□□□ -0.24
SMARCD3-203ENST00000392811 KRTAP3-1Q9BYR8 98 aa13.55□□□□□ -0.24
SMARCD3-203ENST00000392811 ATP11AUNQ6ZP68 121 aa13.51□□□□□ -0.25
SMARCD3-203ENST00000392811 EPPK1P58107 5090 aaKnown RBP13.49□□□□□ -0.25
SMARCD3-203ENST00000392811 MYCBP2O75592 4640 aa13.48□□□□□ -0.25
SMARCD3-203ENST00000392811 RPL37P61927 97 aaKnown RBP13.47□□□□□ -0.25
SMARCD3-203ENST00000392811 XP32Q5T750 250 aa13.46□□□□□ -0.25
SMARCD3-203ENST00000392811 SPTSSBQ8NFR3 76 aa13.43□□□□□ -0.26
SMARCD3-203ENST00000392811 COX6B2Q6YFQ2 88 aa13.39□□□□□ -0.27
SMARCD3-203ENST00000392811 PMAIP1Q13794 54 aa13.34□□□□□ -0.27
SMARCD3-203ENST00000392811 UQCR11O14957 56 aa13.26□□□□□ -0.29
SMARCD3-203ENST00000392811 SEC61GP60059 68 aa13.25□□□□□ -0.29
SMARCD3-203ENST00000392811 SPATA8Q6RVD6 105 aa13.23□□□□□ -0.29
SMARCD3-203ENST00000392811 KRTAP4-5Q9BYR2 181 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms