RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 Q8N1X5 172 aa10.32□□□□□ -0.76
TRAF3IP1-202ENST00000391993 C1orf134Q5TEV5 83 aa10.31□□□□□ -0.76
TRAF3IP1-202ENST00000391993 Q5W150 140 aa10.27□□□□□ -0.76
TRAF3IP1-202ENST00000391993 FAM229AH3BQW9 127 aa10.27□□□□□ -0.77
TRAF3IP1-202ENST00000391993 KRTAP1-5Q9BYS1 174 aa10.26□□□□□ -0.77
TRAF3IP1-202ENST00000391993 COL7A1Q02388 2944 aa10.26□□□□□ -0.77
TRAF3IP1-202ENST00000391993 PSORS1C2Q9UIG4 136 aa10.24□□□□□ -0.77
TRAF3IP1-202ENST00000391993 SPINT4Q6UDR6 99 aa10.22□□□□□ -0.77
TRAF3IP1-202ENST00000391993 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.22□□□□□ -0.77
TRAF3IP1-202ENST00000391993 IGLV5-52A0A0A0MRZ9 124 aa10.21□□□□□ -0.77
TRAF3IP1-202ENST00000391993 PANO1I0J062 215 aa10.21□□□□□ -0.78
TRAF3IP1-202ENST00000391993 ZNF469Q96JG9 3925 aaPredicted RBP10.19□□□□□ -0.78
TRAF3IP1-202ENST00000391993 Q96NJ1 140 aa10.18□□□□□ -0.78
TRAF3IP1-202ENST00000391993 KRTAP24-1Q3LI83 254 aa10.17□□□□□ -0.78
TRAF3IP1-202ENST00000391993 TRRAPQ9Y4A5 3859 aa10.17□□□□□ -0.78
TRAF3IP1-202ENST00000391993 Q6ZR54 194 aa10.17□□□□□ -0.78
TRAF3IP1-202ENST00000391993 NBDYA0A0U1RRE5 68 aa10.15□□□□□ -0.78
TRAF3IP1-202ENST00000391993 TGP01266 2768 aa10.14□□□□□ -0.79
TRAF3IP1-202ENST00000391993 ZNF861PO60384 105 aa10.14□□□□□ -0.79
TRAF3IP1-202ENST00000391993 CSMD3Q7Z407 3707 aa10.14□□□□□ -0.79
TRAF3IP1-202ENST00000391993 SPRR1BP22528 89 aa10.14□□□□□ -0.79
TRAF3IP1-202ENST00000391993 PLA2G1BP04054 148 aaKnown RBP10.12□□□□□ -0.79
TRAF3IP1-202ENST00000391993 LY6G6CO95867 125 aa10.11□□□□□ -0.79
TRAF3IP1-202ENST00000391993 WWC2-AS2Q96NR7 200 aa10.04□□□□□ -0.8
TRAF3IP1-202ENST00000391993 SPATA8Q6RVD6 105 aa10.03□□□□□ -0.8
TRAF3IP1-202ENST00000391993 DMAC1Q96GE9 116 aa10.03□□□□□ -0.8
TRAF3IP1-202ENST00000391993 A0A0D9SG42 100 aa10.02□□□□□ -0.8
TRAF3IP1-202ENST00000391993 AKAP9Q99996 3911 aa10.02□□□□□ -0.81
TRAF3IP1-202ENST00000391993 A0A087WTM6 91 aa9.96□□□□□ -0.81
TRAF3IP1-202ENST00000391993 C9orf92A6NGG3 77 aa9.96□□□□□ -0.81
TRAF3IP1-202ENST00000391993 IGLV7-43P04211 117 aa9.94□□□□□ -0.82
TRAF3IP1-202ENST00000391993 A0A1B0GU33 70 aa9.94□□□□□ -0.82
TRAF3IP1-202ENST00000391993 NUPR2A6NF83 97 aa9.93□□□□□ -0.82
TRAF3IP1-202ENST00000391993 PLAC8Q9NZF1 115 aa9.91□□□□□ -0.82
TRAF3IP1-202ENST00000391993 APLNQ9ULZ1 77 aa9.91□□□□□ -0.82
TRAF3IP1-202ENST00000391993 TYMSOSQ8TAI1 123 aa9.89□□□□□ -0.83
TRAF3IP1-202ENST00000391993 FBN3Q75N90 2809 aa9.83□□□□□ -0.84
TRAF3IP1-202ENST00000391993 ANK3Q12955 4377 aaKnown RBP9.81□□□□□ -0.84
TRAF3IP1-202ENST00000391993 KRTAP25-1Q3LHN0 102 aa9.78□□□□□ -0.84
TRAF3IP1-202ENST00000391993 ROMO1P60602 79 aa9.77□□□□□ -0.85
TRAF3IP1-202ENST00000391993 LINC00483Q53H64 154 aa9.75□□□□□ -0.85
TRAF3IP1-202ENST00000391993 ASB16-AS1Q495Z4 193 aa9.75□□□□□ -0.85
TRAF3IP1-202ENST00000391993 KRTAP13-1Q8IUC0 172 aa9.74□□□□□ -0.85
TRAF3IP1-202ENST00000391993 A8MUU9 505 aa9.66□□□□□ -0.86
TRAF3IP1-202ENST00000391993 LINC00304Q8N9R0 145 aa9.65□□□□□ -0.86
TRAF3IP1-202ENST00000391993 SMR3BP02814 79 aaPredicted RBP9.65□□□□□ -0.87
TRAF3IP1-202ENST00000391993 NDUFAF8A1L188 74 aa9.62□□□□□ -0.87
TRAF3IP1-202ENST00000391993 H1FX-AS1Q4G0G2 97 aa9.6□□□□□ -0.87
TRAF3IP1-202ENST00000391993 Q6ZSA8 131 aa9.6□□□□□ -0.87
TRAF3IP1-202ENST00000391993 MEGF8Q7Z7M0 2845 aa9.56□□□□□ -0.88
TRAF3IP1-202ENST00000391993 H0YAA0 97 aa9.55□□□□□ -0.88
TRAF3IP1-202ENST00000391993 Q6ZRN7 208 aaPredicted RBP9.5□□□□□ -0.89
TRAF3IP1-202ENST00000391993 KRTAP13-3Q3SY46 172 aa9.48□□□□□ -0.89
TRAF3IP1-202ENST00000391993 KRTAP13-2Q52LG2 175 aa9.48□□□□□ -0.89
TRAF3IP1-202ENST00000391993 C10orf95Q9H7T3 257 aa9.48□□□□□ -0.89
TRAF3IP1-202ENST00000391993 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
TRAF3IP1-202ENST00000391993 RPL37P61927 97 aaKnown RBP9.47□□□□□ -0.89
TRAF3IP1-202ENST00000391993 COX6B2Q6YFQ2 88 aa9.4□□□□□ -0.91
TRAF3IP1-202ENST00000391993 KRTAP10-1P60331 282 aa9.34□□□□□ -0.91
TRAF3IP1-202ENST00000391993 KRTAP16-1A8MUX0 517 aa9.32□□□□□ -0.92
TRAF3IP1-202ENST00000391993 P0C880 135 aa9.23□□□□□ -0.93
TRAF3IP1-202ENST00000391993 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
TRAF3IP1-202ENST00000391993 DNAH10Q8IVF4 4471 aa9.23□□□□□ -0.93
TRAF3IP1-202ENST00000391993 S4R3F8 94 aa9.12□□□□□ -0.95
TRAF3IP1-202ENST00000391993 A0A0A0MQY5 61 aa9.11□□□□□ -0.95
TRAF3IP1-202ENST00000391993 LUZP6Q538Z0 58 aa9.1□□□□□ -0.95
TRAF3IP1-202ENST00000391993 ANK2Q01484 3957 aa9.05□□□□□ -0.96
TRAF3IP1-202ENST00000391993 KRTAP1-4P0C5Y4 121 aa9.05□□□□□ -0.96
TRAF3IP1-202ENST00000391993 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
TRAF3IP1-202ENST00000391993 HUWE1Q7Z6Z7 4374 aaKnown RBP8.98□□□□□ -0.97
TRAF3IP1-202ENST00000391993 KRTAP3-1Q9BYR8 98 aa8.96□□□□□ -0.97
TRAF3IP1-202ENST00000391993 LYSTQ99698 3801 aa8.92□□□□□ -0.98
TRAF3IP1-202ENST00000391993 M0QZ58 72 aa8.9□□□□□ -0.99
TRAF3IP1-202ENST00000391993 R4GN34 69 aa8.89□□□□□ -0.99
TRAF3IP1-202ENST00000391993 CAMK2N1Q7Z7J9 78 aa8.85□□□□□ -0.99
TRAF3IP1-202ENST00000391993 KRTAP13-4Q3LI77 160 aa8.84□□□□□ -0.99
TRAF3IP1-202ENST00000391993 KRTAP12-2P59991 146 aa8.78□□□□□ -1
TRAF3IP1-202ENST00000391993 PLECQ15149 4684 aaKnown RBP8.73□□□□□ -1.01
TRAF3IP1-202ENST00000391993 DNAH9Q9NYC9 4486 aa8.7□□□□□ -1.02
TRAF3IP1-202ENST00000391993 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
TRAF3IP1-202ENST00000391993 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
TRAF3IP1-202ENST00000391993 FRAS1Q86XX4 4008 aa8.69□□□□□ -1.02
TRAF3IP1-202ENST00000391993 KRTAP10-6P60371 365 aaPredicted RBP8.66□□□□□ -1.02
TRAF3IP1-202ENST00000391993 DNAH8Q96JB1 4490 aa8.64□□□□□ -1.03
TRAF3IP1-202ENST00000391993 RPS29P62273 56 aaKnown RBP8.63□□□□□ -1.03
TRAF3IP1-202ENST00000391993 KRTAP15-1Q3LI76 137 aa8.62□□□□□ -1.03
TRAF3IP1-202ENST00000391993 CMYA5Q8N3K9 4069 aa8.61□□□□□ -1.03
TRAF3IP1-202ENST00000391993 DNAH11Q96DT5 4516 aa8.61□□□□□ -1.03
TRAF3IP1-202ENST00000391993 ALMS1Q8TCU4 4167 aa8.58□□□□□ -1.04
TRAF3IP1-202ENST00000391993 DNAH7Q8WXX0 4024 aa8.55□□□□□ -1.04
TRAF3IP1-202ENST00000391993 KRTAP12-1P59990 96 aa8.55□□□□□ -1.04
TRAF3IP1-202ENST00000391993 STARD9Q9P2P6 4700 aa8.53□□□□□ -1.04
TRAF3IP1-202ENST00000391993 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
TRAF3IP1-202ENST00000391993 DNAH1Q9P2D7 4330 aa8.53□□□□□ -1.04
TRAF3IP1-202ENST00000391993 DNAH3Q8TD57 4116 aa8.48□□□□□ -1.05
TRAF3IP1-202ENST00000391993 KMT2AQ03164 3969 aa8.47□□□□□ -1.05
TRAF3IP1-202ENST00000391993 XP32Q5T750 250 aa8.45□□□□□ -1.06
TRAF3IP1-202ENST00000391993 Q5VSD8 79 aa8.44□□□□□ -1.06
TRAF3IP1-202ENST00000391993 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
TRAF3IP1-202ENST00000391993 PRKDCP78527 4128 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms