RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 FLNBO75369 2602 aaKnown RBP0.35□□□□□ -2.35
RNU6-220P-201ENST00000390919 TENM3Q9P273 2699 aa0.35□□□□□ -2.35
RNU6-220P-201ENST00000390919 ATP7AQ04656 1500 aa0.35□□□□□ -2.35
RNU6-220P-201ENST00000390919 SRRM2Q9UQ35 2752 aaKnown RBP0.35□□□□□ -2.35
RNU6-220P-201ENST00000390919 SAMD9LQ8IVG5 1584 aa0.35□□□□□ -2.35
RNU6-220P-201ENST00000390919 DCHS2Q6V1P9 2916 aa0.34□□□□□ -2.35
RNU6-220P-201ENST00000390919 NF1P21359 2839 aa0.34□□□□□ -2.35
RNU6-220P-201ENST00000390919 HRNRQ86YZ3 2850 aaPredicted RBP0.34□□□□□ -2.35
RNU6-220P-201ENST00000390919 HUWE1Q7Z6Z7 4374 aaKnown RBP0.34□□□□□ -2.35
RNU6-220P-201ENST00000390919 SPRR2BP35325 72 aa0.34□□□□□ -2.36
RNU6-220P-201ENST00000390919 BSNQ9UPA5 3926 aa0.34□□□□□ -2.36
RNU6-220P-201ENST00000390919 MAST4O15021 2626 aa0.34□□□□□ -2.36
RNU6-220P-201ENST00000390919 MYCBP2O75592 4640 aa0.33□□□□□ -2.36
RNU6-220P-201ENST00000390919 FAT2Q9NYQ8 4349 aa0.33□□□□□ -2.36
RNU6-220P-201ENST00000390919 NSD1Q96L73 2696 aaPredicted RBP0.33□□□□□ -2.36
RNU6-220P-201ENST00000390919 CACNA1AO00555 2505 aa0.33□□□□□ -2.36
RNU6-220P-201ENST00000390919 SYNE1Q8NF91 8797 aaKnown RBP0.32□□□□□ -2.36
RNU6-220P-201ENST00000390919 M0QZ58 72 aa0.32□□□□□ -2.36
RNU6-220P-201ENST00000390919 TNP1P09430 55 aa0.32□□□□□ -2.36
RNU6-220P-201ENST00000390919 KRTAP5-10Q6L8G5 202 aa0.32□□□□□ -2.36
RNU6-220P-201ENST00000390919 SPTBN4Q9H254 2564 aa0.32□□□□□ -2.36
RNU6-220P-201ENST00000390919 LRP1Q07954 4544 aaKnown RBP0.32□□□□□ -2.36
RNU6-220P-201ENST00000390919 KMT2DO14686 5537 aa0.31□□□□□ -2.36
RNU6-220P-201ENST00000390919 DEFB110Q30KQ9 67 aa0.31□□□□□ -2.36
RNU6-220P-201ENST00000390919 PRKDCP78527 4128 aaKnown RBP0.31□□□□□ -2.36
RNU6-220P-201ENST00000390919 A0A0C4DFX4 3053 aa0.31□□□□□ -2.36
RNU6-220P-201ENST00000390919 FLNCQ14315 2725 aa0.3□□□□□ -2.36
RNU6-220P-201ENST00000390919 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
RNU6-220P-201ENST00000390919 MTORP42345 2549 aa0.3□□□□□ -2.36
RNU6-220P-201ENST00000390919 FLNAP21333 2647 aaKnown RBP0.3□□□□□ -2.36
RNU6-220P-201ENST00000390919 ZZEF1O43149 2961 aa0.3□□□□□ -2.36
RNU6-220P-201ENST00000390919 GCN1Q92616 2671 aaKnown RBP0.3□□□□□ -2.36
RNU6-220P-201ENST00000390919 PDZD2O15018 2839 aa0.28□□□□□ -2.36
RNU6-220P-201ENST00000390919 COL7A1Q02388 2944 aa0.27□□□□□ -2.37
RNU6-220P-201ENST00000390919 DMXL1Q9Y485 3027 aa0.27□□□□□ -2.37
RNU6-220P-201ENST00000390919 POLR2KP53803 58 aaKnown RBP0.27□□□□□ -2.37
RNU6-220P-201ENST00000390919 MUC16Q8WXI7 14507 aa0.27□□□□□ -2.37
RNU6-220P-201ENST00000390919 SPG11Q96JI7 2443 aa0.27□□□□□ -2.37
RNU6-220P-201ENST00000390919 LRRK2Q5S007 2527 aa0.27□□□□□ -2.37
RNU6-220P-201ENST00000390919 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
RNU6-220P-201ENST00000390919 ANKRD11Q6UB99 2663 aaPredicted RBP0.26□□□□□ -2.37
RNU6-220P-201ENST00000390919 PHGR1C9JFL3 82 aa0.26□□□□□ -2.37
RNU6-220P-201ENST00000390919 SPRR2AP35326 72 aa0.26□□□□□ -2.37
RNU6-220P-201ENST00000390919 SNRPGP62308 76 aaKnown RBP0.26□□□□□ -2.37
RNU6-220P-201ENST00000390919 ACACAQ13085 2346 aa0.25□□□□□ -2.37
RNU6-220P-201ENST00000390919 KMT2AQ03164 3969 aa0.25□□□□□ -2.37
RNU6-220P-201ENST00000390919 UTP20O75691 2785 aaKnown RBP0.25□□□□□ -2.37
RNU6-220P-201ENST00000390919 LPAP08519 4548 aa0.25□□□□□ -2.37
RNU6-220P-201ENST00000390919 SETD2Q9BYW2 2564 aaPredicted RBP0.25□□□□□ -2.37
RNU6-220P-201ENST00000390919 SONP18583 2426 aaKnown RBP0.25□□□□□ -2.37
RNU6-220P-201ENST00000390919 LYSTQ99698 3801 aa0.25□□□□□ -2.37
RNU6-220P-201ENST00000390919 TACC2O95359 2948 aa0.24□□□□□ -2.37
RNU6-220P-201ENST00000390919 COL6A5A8TX70 2615 aa0.24□□□□□ -2.37
RNU6-220P-201ENST00000390919 NBEAQ8NFP9 2946 aa0.24□□□□□ -2.37
RNU6-220P-201ENST00000390919 SPART-AS1P0CW21 52 aa0.23□□□□□ -2.37
RNU6-220P-201ENST00000390919 CLPSL2Q6UWE3 100 aa0.23□□□□□ -2.37
RNU6-220P-201ENST00000390919 TENM2Q9NT68 2774 aa0.23□□□□□ -2.37
RNU6-220P-201ENST00000390919 COL6A3P12111 3177 aa0.22□□□□□ -2.37
RNU6-220P-201ENST00000390919 HIVEP1P15822 2718 aa0.22□□□□□ -2.37
RNU6-220P-201ENST00000390919 MAP1AP78559 2803 aaPredicted RBP0.22□□□□□ -2.37
RNU6-220P-201ENST00000390919 ZANQ9Y493 2812 aa0.22□□□□□ -2.37
RNU6-220P-201ENST00000390919 MT1AP04731 61 aa0.22□□□□□ -2.37
RNU6-220P-201ENST00000390919 KRTAP6-2Q3LI66 62 aa0.22□□□□□ -2.37
RNU6-220P-201ENST00000390919 KALRNO60229 2985 aa0.22□□□□□ -2.37
RNU6-220P-201ENST00000390919 FAM186AA6NE01 2351 aa0.21□□□□□ -2.38
RNU6-220P-201ENST00000390919 STAB1Q9NY15 2570 aa0.21□□□□□ -2.38
RNU6-220P-201ENST00000390919 ANKHD1Q8IWZ3 2542 aaKnown RBP0.21□□□□□ -2.38
RNU6-220P-201ENST00000390919 NBEAL2Q6ZNJ1 2754 aa0.21□□□□□ -2.38
RNU6-220P-201ENST00000390919 RIF1Q5UIP0 2472 aaKnown RBP0.21□□□□□ -2.38
RNU6-220P-201ENST00000390919 SSPOA2VEC9 5147 aa0.21□□□□□ -2.38
RNU6-220P-201ENST00000390919 HSPG2P98160 4391 aa0.21□□□□□ -2.38
RNU6-220P-201ENST00000390919 TGP01266 2768 aa0.21□□□□□ -2.38
RNU6-220P-201ENST00000390919 NBEAL1Q6ZS30 2694 aa0.2□□□□□ -2.38
RNU6-220P-201ENST00000390919 SPRR2EP22531 72 aa0.2□□□□□ -2.38
RNU6-220P-201ENST00000390919 RPL39P62891 51 aaKnown RBP0.2□□□□□ -2.38
RNU6-220P-201ENST00000390919 TOMM7Q9P0U1 55 aa0.2□□□□□ -2.38
RNU6-220P-201ENST00000390919 EPG5Q9HCE0 2579 aa0.2□□□□□ -2.38
RNU6-220P-201ENST00000390919 FASNP49327 2511 aaKnown RBP0.2□□□□□ -2.38
RNU6-220P-201ENST00000390919 HTTP42858 3142 aa0.2□□□□□ -2.38
RNU6-220P-201ENST00000390919 MROH2BQ7Z745 1585 aa0.19□□□□□ -2.38
RNU6-220P-201ENST00000390919 PKD1P98161 4303 aa0.19□□□□□ -2.38
RNU6-220P-201ENST00000390919 SPRR2GQ9BYE4 73 aa0.19□□□□□ -2.38
RNU6-220P-201ENST00000390919 HMCN2Q8NDA2 5059 aa0.19□□□□□ -2.38
RNU6-220P-201ENST00000390919 ACACBO00763 2458 aa0.19□□□□□ -2.38
RNU6-220P-201ENST00000390919 MDN1Q9NU22 5596 aa0.18□□□□□ -2.38
RNU6-220P-201ENST00000390919 GCC2Q8IWJ2 1684 aa0.18□□□□□ -2.38
RNU6-220P-201ENST00000390919 STAB2Q8WWQ8 2551 aa0.17□□□□□ -2.38
RNU6-220P-201ENST00000390919 SACSQ9NZJ4 4579 aa0.17□□□□□ -2.38
RNU6-220P-201ENST00000390919 CCDC168Q8NDH2 2452 aa0.17□□□□□ -2.38
RNU6-220P-201ENST00000390919 TEP1Q99973 2627 aaKnown RBP0.17□□□□□ -2.38
RNU6-220P-201ENST00000390919 DUOX1Q9NRD9 1551 aa0.17□□□□□ -2.38
RNU6-220P-201ENST00000390919 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
RNU6-220P-201ENST00000390919 MYO18BQ8IUG5 2567 aa0.16□□□□□ -2.38
RNU6-220P-201ENST00000390919 COL12A1Q99715 3063 aa0.16□□□□□ -2.38
RNU6-220P-201ENST00000390919 RPL39LQ96EH5 51 aaKnown RBP0.16□□□□□ -2.38
RNU6-220P-201ENST00000390919 SPRR2FQ96RM1 72 aa0.16□□□□□ -2.38
RNU6-220P-201ENST00000390919 HECTD4Q9Y4D8 3996 aa0.16□□□□□ -2.38
RNU6-220P-201ENST00000390919 VPS13BQ7Z7G8 4022 aa0.16□□□□□ -2.38
RNU6-220P-201ENST00000390919 CUBNO60494 3623 aa0.15□□□□□ -2.38
RNU6-220P-201ENST00000390919 SVEP1Q4LDE5 3571 aa0.15□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms