RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 VPS13BQ7Z7G8 4022 aa0.1□□□□□ -2.39
TRAJ39-201ENST00000390498 PKHD1P08F94 4074 aa0.09□□□□□ -2.39
TRAJ39-201ENST00000390498 APC2O95996 2303 aa0.09□□□□□ -2.39
TRAJ39-201ENST00000390498 FAM208AQ9UK61 1670 aaKnown RBP0.09□□□□□ -2.39
TRAJ39-201ENST00000390498 KAAG1Q9UBP8 84 aa0.09□□□□□ -2.4
TRAJ39-201ENST00000390498 CREBBPQ92793 2442 aa0.09□□□□□ -2.4
TRAJ39-201ENST00000390498 FLNBO75369 2602 aaKnown RBP0.09□□□□□ -2.4
TRAJ39-201ENST00000390498 WNK1Q9H4A3 2382 aa0.09□□□□□ -2.4
TRAJ39-201ENST00000390498 KMT2DO14686 5537 aa0.08□□□□□ -2.4
TRAJ39-201ENST00000390498 KRTAP6-2Q3LI66 62 aa0.08□□□□□ -2.4
TRAJ39-201ENST00000390498 FLNCQ14315 2725 aa0.08□□□□□ -2.4
TRAJ39-201ENST00000390498 MAP1BP46821 2468 aaKnown RBP0.08□□□□□ -2.4
TRAJ39-201ENST00000390498 SYNE2Q8WXH0 6885 aaKnown RBP0.07□□□□□ -2.4
TRAJ39-201ENST00000390498 MMP24-AS1A0A0U1RRL7 71 aa0.07□□□□□ -2.4
TRAJ39-201ENST00000390498 WFDC10BQ8IUB3 73 aa0.07□□□□□ -2.4
TRAJ39-201ENST00000390498 SMIM2Q9BVW6 85 aa0.07□□□□□ -2.4
TRAJ39-201ENST00000390498 COL7A1Q02388 2944 aa0.07□□□□□ -2.4
TRAJ39-201ENST00000390498 MDN1Q9NU22 5596 aa0.07□□□□□ -2.4
TRAJ39-201ENST00000390498 NFAT5O94916 1531 aa0.07□□□□□ -2.4
TRAJ39-201ENST00000390498 DCHS2Q6V1P9 2916 aa0.07□□□□□ -2.4
TRAJ39-201ENST00000390498 COL6A3P12111 3177 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 DMBT1Q9UGM3 2413 aaPredicted RBP0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 CEP290O15078 2479 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 M0QY20 66 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 SPRR2EP22531 72 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 DEFB131AP59861 70 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 TFF3Q07654 80 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 TOMM5Q8N4H5 51 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 SPTBN4Q9H254 2564 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 NBASA2RRP1 2371 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 TRPM2O94759 1503 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 LRP2P98164 4655 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 LRP1BQ9NZR2 4599 aa0.06□□□□□ -2.4
TRAJ39-201ENST00000390498 PKHD1L1Q86WI1 4243 aa0.05□□□□□ -2.4
TRAJ39-201ENST00000390498 FLGP20930 4061 aaPredicted RBP0.05□□□□□ -2.4
TRAJ39-201ENST00000390498 DNAH3Q8TD57 4116 aa0.05□□□□□ -2.4
TRAJ39-201ENST00000390498 PKD1L2Q7Z442 2459 aa0.05□□□□□ -2.4
TRAJ39-201ENST00000390498 A8MTW9 85 aa0.05□□□□□ -2.4
TRAJ39-201ENST00000390498 MT1AP04731 61 aa0.05□□□□□ -2.4
TRAJ39-201ENST00000390498 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
TRAJ39-201ENST00000390498 CLTCL1P53675 1640 aa0.05□□□□□ -2.4
TRAJ39-201ENST00000390498 NF1P21359 2839 aa0.05□□□□□ -2.4
TRAJ39-201ENST00000390498 FLNAP21333 2647 aaKnown RBP0.04□□□□□ -2.4
TRAJ39-201ENST00000390498 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
TRAJ39-201ENST00000390498 SACSQ9NZJ4 4579 aa0.04□□□□□ -2.4
TRAJ39-201ENST00000390498 TNP1P09430 55 aa0.04□□□□□ -2.4
TRAJ39-201ENST00000390498 SETD2Q9BYW2 2564 aaPredicted RBP0.04□□□□□ -2.4
TRAJ39-201ENST00000390498 SONP18583 2426 aaKnown RBP0.04□□□□□ -2.4
TRAJ39-201ENST00000390498 MACF1Q9UPN3 7388 aaKnown RBP0.04□□□□□ -2.4
TRAJ39-201ENST00000390498 ANK3Q12955 4377 aaKnown RBP0.03□□□□□ -2.4
TRAJ39-201ENST00000390498 STAB1Q9NY15 2570 aa0.03□□□□□ -2.4
TRAJ39-201ENST00000390498 ATP7AQ04656 1500 aa0.03□□□□□ -2.4
TRAJ39-201ENST00000390498 PDZD2O15018 2839 aa0.03□□□□□ -2.4
TRAJ39-201ENST00000390498 M0QZ58 72 aa0.03□□□□□ -2.4
TRAJ39-201ENST00000390498 DEFB110Q30KQ9 67 aa0.03□□□□□ -2.4
TRAJ39-201ENST00000390498 FSIP2Q5CZC0 6907 aa0.03□□□□□ -2.4
TRAJ39-201ENST00000390498 TENM2Q9NT68 2774 aa0.03□□□□□ -2.41
TRAJ39-201ENST00000390498 ZANQ9Y493 2812 aa0.02□□□□□ -2.41
TRAJ39-201ENST00000390498 ZZEF1O43149 2961 aa0.02□□□□□ -2.41
TRAJ39-201ENST00000390498 NDUFA1O15239 70 aa0.02□□□□□ -2.41
TRAJ39-201ENST00000390498 SPRR2FQ96RM1 72 aa0.02□□□□□ -2.41
TRAJ39-201ENST00000390498 MUC2Q02817 5179 aa0.02□□□□□ -2.41
TRAJ39-201ENST00000390498 GCN1Q92616 2671 aaKnown RBP0.02□□□□□ -2.41
TRAJ39-201ENST00000390498 SVEP1Q4LDE5 3571 aa0.02□□□□□ -2.41
TRAJ39-201ENST00000390498 CUBNO60494 3623 aa0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 MAP1AP78559 2803 aaPredicted RBP0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 ANKRD11Q6UB99 2663 aaPredicted RBP0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 DMXL1Q9Y485 3027 aa0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 FAT3Q8TDW7 4589 aa0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 SAMD9LQ8IVG5 1584 aa0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 TACC2O95359 2948 aa0□□□□□ -2.41
TRAJ39-201ENST00000390498 A0A0C4DFX4 3053 aa0□□□□□ -2.41
TRAJ39-201ENST00000390498 DNAH9Q9NYC9 4486 aa0□□□□□ -2.41
TRAJ39-201ENST00000390498 MTORP42345 2549 aa0□□□□□ -2.41
TRAJ39-201ENST00000390498 AKAP9Q99996 3911 aa0□□□□□ -2.41
TRAJ39-201ENST00000390498 TGP01266 2768 aa-0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 SRRM2Q9UQ35 2752 aaKnown RBP-0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 DNAH2Q9P225 4427 aa-0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 DNAH6Q9C0G6 4158 aa-0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 TEP1Q99973 2627 aaKnown RBP-0.01□□□□□ -2.41
TRAJ39-201ENST00000390498 APOBP04114 4563 aaKnown RBP-0.02□□□□□ -2.41
TRAJ39-201ENST00000390498 CLPSL2Q6UWE3 100 aa-0.02□□□□□ -2.41
TRAJ39-201ENST00000390498 HTTP42858 3142 aa-0.02□□□□□ -2.41
TRAJ39-201ENST00000390498 SPG11Q96JI7 2443 aa-0.03□□□□□ -2.41
TRAJ39-201ENST00000390498 HIVEP1P15822 2718 aa-0.03□□□□□ -2.41
TRAJ39-201ENST00000390498 KRTAP8-1Q8IUC2 63 aa-0.03□□□□□ -2.41
TRAJ39-201ENST00000390498 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.03□□□□□ -2.41
TRAJ39-201ENST00000390498 VPS13DQ5THJ4 4388 aa-0.03□□□□□ -2.41
TRAJ39-201ENST00000390498 NBEAL1Q6ZS30 2694 aa-0.03□□□□□ -2.41
TRAJ39-201ENST00000390498 TOP2AP11388 1531 aaKnown RBP-0.03□□□□□ -2.41
TRAJ39-201ENST00000390498 STAB2Q8WWQ8 2551 aa-0.03□□□□□ -2.41
TRAJ39-201ENST00000390498 PCLOQ9Y6V0 5065 aa-0.04□□□□□ -2.42
TRAJ39-201ENST00000390498 POLR2KP53803 58 aaKnown RBP-0.04□□□□□ -2.42
TRAJ39-201ENST00000390498 KRTAP6-1Q3LI64 71 aa-0.04□□□□□ -2.42
TRAJ39-201ENST00000390498 KRTAP19-7Q3SYF9 63 aa-0.04□□□□□ -2.42
TRAJ39-201ENST00000390498 ACACBO00763 2458 aa-0.04□□□□□ -2.42
TRAJ39-201ENST00000390498 DNAH11Q96DT5 4516 aa-0.04□□□□□ -2.42
TRAJ39-201ENST00000390498 RANBP2P49792 3224 aaKnown RBP-0.04□□□□□ -2.42
TRAJ39-201ENST00000390498 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.04□□□□□ -2.42
TRAJ39-201ENST00000390498 LAMA5O15230 3695 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms