RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 KRTAP11-1Q8IUC1 163 aa3.02□□□□□ -1.93
LTN1-202ENST00000389194 SPRR1AP35321 89 aa3.02□□□□□ -1.93
LTN1-202ENST00000389194 SPANXA2-OT1Q8N9U9 137 aa3.02□□□□□ -1.93
LTN1-202ENST00000389194 CDC42SE1Q9NRR8 79 aa3.01□□□□□ -1.93
LTN1-202ENST00000389194 A0A087X002 238 aa3.01□□□□□ -1.93
LTN1-202ENST00000389194 NOTCH2NLQ7Z3S9 236 aa3.01□□□□□ -1.93
LTN1-202ENST00000389194 IGLV7-46A0A075B6I9 117 aa3.01□□□□□ -1.93
LTN1-202ENST00000389194 Q1T7F1 81 aa3.01□□□□□ -1.93
LTN1-202ENST00000389194 LINC00472Q9H8W2 130 aa3.01□□□□□ -1.93
LTN1-202ENST00000389194 Q5VV11 94 aa3□□□□□ -1.93
LTN1-202ENST00000389194 KRTAP10-1P60331 282 aa2.99□□□□□ -1.93
LTN1-202ENST00000389194 WIPF1O43516 503 aa2.99□□□□□ -1.93
LTN1-202ENST00000389194 Q5W150 140 aa2.99□□□□□ -1.93
LTN1-202ENST00000389194 LCA10Q71F78 164 aa2.98□□□□□ -1.93
LTN1-202ENST00000389194 RBM12B-AS1Q9P1G2 102 aa2.98□□□□□ -1.93
LTN1-202ENST00000389194 A0A1B0GU33 70 aa2.97□□□□□ -1.93
LTN1-202ENST00000389194 PLAC8Q9NZF1 115 aa2.97□□□□□ -1.93
LTN1-202ENST00000389194 A8MU10 97 aa2.97□□□□□ -1.93
LTN1-202ENST00000389194 TGP01266 2768 aa2.97□□□□□ -1.93
LTN1-202ENST00000389194 TENM2Q9NT68 2774 aa2.96□□□□□ -1.93
LTN1-202ENST00000389194 KRTAP7-1Q8IUC3 87 aa2.96□□□□□ -1.94
LTN1-202ENST00000389194 CSAG1Q6PB30 78 aa2.96□□□□□ -1.94
LTN1-202ENST00000389194 KRTAP4-16G5E9R7 235 aaPredicted RBP2.96□□□□□ -1.94
LTN1-202ENST00000389194 Q6ZSA8 131 aa2.96□□□□□ -1.94
LTN1-202ENST00000389194 Q75L30 129 aa2.95□□□□□ -1.94
LTN1-202ENST00000389194 ZCCHC13Q8WW36 166 aaKnown RBP2.95□□□□□ -1.94
LTN1-202ENST00000389194 SPATA8Q6RVD6 105 aa2.94□□□□□ -1.94
LTN1-202ENST00000389194 VPS13CQ709C8 3753 aa2.94□□□□□ -1.94
LTN1-202ENST00000389194 OTOGQ6ZRI0 2925 aa2.93□□□□□ -1.94
LTN1-202ENST00000389194 LINC01558Q9Y6Z2 57 aa2.93□□□□□ -1.94
LTN1-202ENST00000389194 TRRAPQ9Y4A5 3859 aa2.93□□□□□ -1.94
LTN1-202ENST00000389194 M0R2T5 61 aa2.92□□□□□ -1.94
LTN1-202ENST00000389194 SPRR1BP22528 89 aa2.92□□□□□ -1.94
LTN1-202ENST00000389194 CAMK2N1Q7Z7J9 78 aa2.92□□□□□ -1.94
LTN1-202ENST00000389194 BSNQ9UPA5 3926 aa2.91□□□□□ -1.94
LTN1-202ENST00000389194 KRTAP29-1A8MX34 341 aaPredicted RBP2.9□□□□□ -1.94
LTN1-202ENST00000389194 Q5VSD8 79 aa2.9□□□□□ -1.95
LTN1-202ENST00000389194 ADM2Q7Z4H4 148 aa2.89□□□□□ -1.95
LTN1-202ENST00000389194 CSMD3Q7Z407 3707 aa2.89□□□□□ -1.95
LTN1-202ENST00000389194 S4R3F8 94 aa2.89□□□□□ -1.95
LTN1-202ENST00000389194 Q6ZR54 194 aa2.88□□□□□ -1.95
LTN1-202ENST00000389194 H3BS24 57 aa2.88□□□□□ -1.95
LTN1-202ENST00000389194 COL7A1Q02388 2944 aa2.87□□□□□ -1.95
LTN1-202ENST00000389194 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
LTN1-202ENST00000389194 R4GN34 69 aa2.86□□□□□ -1.95
LTN1-202ENST00000389194 Q6ZRN7 208 aaPredicted RBP2.86□□□□□ -1.95
LTN1-202ENST00000389194 DMAC1Q96GE9 116 aa2.86□□□□□ -1.95
LTN1-202ENST00000389194 FBN3Q75N90 2809 aa2.86□□□□□ -1.95
LTN1-202ENST00000389194 KRTAP13-2Q52LG2 175 aa2.85□□□□□ -1.95
LTN1-202ENST00000389194 M0QZ58 72 aa2.84□□□□□ -1.96
LTN1-202ENST00000389194 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
LTN1-202ENST00000389194 H1FX-AS1Q4G0G2 97 aa2.83□□□□□ -1.96
LTN1-202ENST00000389194 LCE6AA0A183 80 aa2.82□□□□□ -1.96
LTN1-202ENST00000389194 RPL37P61927 97 aaKnown RBP2.81□□□□□ -1.96
LTN1-202ENST00000389194 KRTAP13-1Q8IUC0 172 aa2.79□□□□□ -1.96
LTN1-202ENST00000389194 ROMO1P60602 79 aa2.79□□□□□ -1.96
LTN1-202ENST00000389194 MEGF8Q7Z7M0 2845 aa2.79□□□□□ -1.96
LTN1-202ENST00000389194 ZNF469Q96JG9 3925 aaPredicted RBP2.77□□□□□ -1.97
LTN1-202ENST00000389194 A6NN06 94 aa2.77□□□□□ -1.97
LTN1-202ENST00000389194 SEC61BP60468 96 aaKnown RBP2.75□□□□□ -1.97
LTN1-202ENST00000389194 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
LTN1-202ENST00000389194 A8MUU9 505 aa2.72□□□□□ -1.97
LTN1-202ENST00000389194 KRTAP25-1Q3LHN0 102 aa2.71□□□□□ -1.98
LTN1-202ENST00000389194 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
LTN1-202ENST00000389194 A0A1B0GVY2 172 aa2.7□□□□□ -1.98
LTN1-202ENST00000389194 ANK3Q12955 4377 aaKnown RBP2.69□□□□□ -1.98
LTN1-202ENST00000389194 ASB16-AS1Q495Z4 193 aa2.69□□□□□ -1.98
LTN1-202ENST00000389194 KRTAP1-4P0C5Y4 121 aa2.69□□□□□ -1.98
LTN1-202ENST00000389194 C20orf166-AS1Q96NR2 134 aa2.69□□□□□ -1.98
LTN1-202ENST00000389194 PLAC4Q8WY50 150 aa2.66□□□□□ -1.98
LTN1-202ENST00000389194 H0YAA0 97 aa2.66□□□□□ -1.98
LTN1-202ENST00000389194 A0A0A0MQY5 61 aa2.64□□□□□ -1.99
LTN1-202ENST00000389194 AKAP9Q99996 3911 aa2.64□□□□□ -1.99
LTN1-202ENST00000389194 XP32Q5T750 250 aa2.63□□□□□ -1.99
LTN1-202ENST00000389194 P0C880 135 aa2.62□□□□□ -1.99
LTN1-202ENST00000389194 KRTAP16-1A8MUX0 517 aa2.61□□□□□ -1.99
LTN1-202ENST00000389194 RPS29P62273 56 aaKnown RBP2.61□□□□□ -1.99
LTN1-202ENST00000389194 KRTAP10-8P60410 259 aa2.6□□□□□ -1.99
LTN1-202ENST00000389194 TNP1P09430 55 aa2.55□□□□□ -2
LTN1-202ENST00000389194 KRTAP13-3Q3SY46 172 aa2.54□□□□□ -2
LTN1-202ENST00000389194 HUWE1Q7Z6Z7 4374 aaKnown RBP2.52□□□□□ -2.01
LTN1-202ENST00000389194 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
LTN1-202ENST00000389194 KRTAP10-10P60014 251 aa2.51□□□□□ -2.01
LTN1-202ENST00000389194 KRTAP3-1Q9BYR8 98 aa2.49□□□□□ -2.01
LTN1-202ENST00000389194 DNAH10Q8IVF4 4471 aa2.47□□□□□ -2.01
LTN1-202ENST00000389194 TPRXLQ17RH7 258 aa2.47□□□□□ -2.01
LTN1-202ENST00000389194 KRTAP13-4Q3LI77 160 aa2.46□□□□□ -2.02
LTN1-202ENST00000389194 KRTAP21-3Q3LHN1 58 aa2.43□□□□□ -2.02
LTN1-202ENST00000389194 KRTAP12-1P59990 96 aa2.42□□□□□ -2.02
LTN1-202ENST00000389194 LYSTQ99698 3801 aa2.41□□□□□ -2.02
LTN1-202ENST00000389194 KRTAP10-6P60371 365 aaPredicted RBP2.39□□□□□ -2.03
LTN1-202ENST00000389194 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
LTN1-202ENST00000389194 KRTAP4-5Q9BYR2 181 aa2.38□□□□□ -2.03
LTN1-202ENST00000389194 DNAH11Q96DT5 4516 aa2.38□□□□□ -2.03
LTN1-202ENST00000389194 DNAH9Q9NYC9 4486 aa2.38□□□□□ -2.03
LTN1-202ENST00000389194 PLECQ15149 4684 aaKnown RBP2.38□□□□□ -2.03
LTN1-202ENST00000389194 KMT2AQ03164 3969 aa2.38□□□□□ -2.03
LTN1-202ENST00000389194 DNAH1Q9P2D7 4330 aa2.37□□□□□ -2.03
LTN1-202ENST00000389194 ANK2Q01484 3957 aa2.36□□□□□ -2.03
LTN1-202ENST00000389194 FRAS1Q86XX4 4008 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms