RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 HRES1P13985 223 aa3.57□□□□□ -1.84
RFC1-202ENST00000381897 PDZD2O15018 2839 aa3.57□□□□□ -1.84
RFC1-202ENST00000381897 CNBPP62633 177 aaKnown RBP3.56□□□□□ -1.84
RFC1-202ENST00000381897 C9orf163Q8N9P6 203 aa3.56□□□□□ -1.84
RFC1-202ENST00000381897 TENM1Q9UKZ4 2725 aa3.56□□□□□ -1.84
RFC1-202ENST00000381897 MGAM2Q2M2H8 2515 aa3.56□□□□□ -1.84
RFC1-202ENST00000381897 KRTAP29-1A8MX34 341 aaPredicted RBP3.55□□□□□ -1.84
RFC1-202ENST00000381897 K7EIL1 84 aa3.55□□□□□ -1.84
RFC1-202ENST00000381897 NBDYA0A0U1RRE5 68 aa3.54□□□□□ -1.84
RFC1-202ENST00000381897 Q8N1X5 172 aa3.54□□□□□ -1.84
RFC1-202ENST00000381897 KRTAP1-3Q8IUG1 177 aa3.54□□□□□ -1.84
RFC1-202ENST00000381897 NOTCH1P46531 2555 aa3.54□□□□□ -1.84
RFC1-202ENST00000381897 OTOGQ6ZRI0 2925 aa3.54□□□□□ -1.84
RFC1-202ENST00000381897 MMP24-AS1A0A0U1RRL7 71 aa3.54□□□□□ -1.84
RFC1-202ENST00000381897 PLAC4Q8WY50 150 aa3.54□□□□□ -1.84
RFC1-202ENST00000381897 A0A087X002 238 aa3.53□□□□□ -1.84
RFC1-202ENST00000381897 FBN1P35555 2871 aaKnown RBP3.53□□□□□ -1.84
RFC1-202ENST00000381897 KRTAP4-16G5E9R7 235 aaPredicted RBP3.53□□□□□ -1.84
RFC1-202ENST00000381897 SPINK6Q6UWN8 80 aa3.53□□□□□ -1.85
RFC1-202ENST00000381897 KRTAP10-3P60369 221 aa3.52□□□□□ -1.85
RFC1-202ENST00000381897 KRTAP26-1Q6PEX3 210 aa3.52□□□□□ -1.85
RFC1-202ENST00000381897 STAB1Q9NY15 2570 aa3.52□□□□□ -1.85
RFC1-202ENST00000381897 LINC00472Q9H8W2 130 aa3.52□□□□□ -1.85
RFC1-202ENST00000381897 NBEAL1Q6ZS30 2694 aa3.52□□□□□ -1.85
RFC1-202ENST00000381897 SPRR1BP22528 89 aa3.52□□□□□ -1.85
RFC1-202ENST00000381897 A0A1W2PNN7 141 aa3.51□□□□□ -1.85
RFC1-202ENST00000381897 KRTAP1-1Q07627 177 aa3.5□□□□□ -1.85
RFC1-202ENST00000381897 COX6B2Q6YFQ2 88 aa3.5□□□□□ -1.85
RFC1-202ENST00000381897 PKD1L1Q8TDX9 2849 aa3.5□□□□□ -1.85
RFC1-202ENST00000381897 LINC00304Q8N9R0 145 aa3.49□□□□□ -1.85
RFC1-202ENST00000381897 ANK3Q12955 4377 aaKnown RBP3.49□□□□□ -1.85
RFC1-202ENST00000381897 COL6A5A8TX70 2615 aa3.48□□□□□ -1.85
RFC1-202ENST00000381897 A8MU10 97 aa3.47□□□□□ -1.85
RFC1-202ENST00000381897 NSD1Q96L73 2696 aaPredicted RBP3.46□□□□□ -1.86
RFC1-202ENST00000381897 CSMD3Q7Z407 3707 aa3.45□□□□□ -1.86
RFC1-202ENST00000381897 PSORS1C2Q9UIG4 136 aa3.45□□□□□ -1.86
RFC1-202ENST00000381897 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
RFC1-202ENST00000381897 A0A1B0GU33 70 aa3.44□□□□□ -1.86
RFC1-202ENST00000381897 PLAC8Q9NZF1 115 aa3.44□□□□□ -1.86
RFC1-202ENST00000381897 KRTAP10-11P60412 298 aa3.44□□□□□ -1.86
RFC1-202ENST00000381897 TENM3Q9P273 2699 aa3.42□□□□□ -1.86
RFC1-202ENST00000381897 KMT2BQ9UMN6 2715 aaPredicted RBP3.39□□□□□ -1.87
RFC1-202ENST00000381897 A0A087WTM6 91 aa3.38□□□□□ -1.87
RFC1-202ENST00000381897 Q5W150 140 aa3.37□□□□□ -1.87
RFC1-202ENST00000381897 KRTAP7-1Q8IUC3 87 aa3.37□□□□□ -1.87
RFC1-202ENST00000381897 SMR3BP02814 79 aaPredicted RBP3.36□□□□□ -1.87
RFC1-202ENST00000381897 M0R2T5 61 aa3.36□□□□□ -1.87
RFC1-202ENST00000381897 TENM2Q9NT68 2774 aa3.36□□□□□ -1.87
RFC1-202ENST00000381897 ANK2Q01484 3957 aa3.35□□□□□ -1.87
RFC1-202ENST00000381897 Q96NJ1 140 aa3.35□□□□□ -1.87
RFC1-202ENST00000381897 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
RFC1-202ENST00000381897 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
RFC1-202ENST00000381897 SPACA4Q8TDM5 124 aa3.32□□□□□ -1.88
RFC1-202ENST00000381897 Q5VSD8 79 aa3.32□□□□□ -1.88
RFC1-202ENST00000381897 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
RFC1-202ENST00000381897 STAB2Q8WWQ8 2551 aa3.31□□□□□ -1.88
RFC1-202ENST00000381897 LYSTQ99698 3801 aa3.3□□□□□ -1.88
RFC1-202ENST00000381897 KRTAP13-1Q8IUC0 172 aa3.3□□□□□ -1.88
RFC1-202ENST00000381897 KRTAP11-1Q8IUC1 163 aa3.3□□□□□ -1.88
RFC1-202ENST00000381897 SRRM2Q9UQ35 2752 aaKnown RBP3.29□□□□□ -1.88
RFC1-202ENST00000381897 A0A0D9SG42 100 aa3.29□□□□□ -1.88
RFC1-202ENST00000381897 ANAPC11Q9NYG5 84 aa3.29□□□□□ -1.88
RFC1-202ENST00000381897 PANO1I0J062 215 aa3.28□□□□□ -1.88
RFC1-202ENST00000381897 COL7A1Q02388 2944 aa3.27□□□□□ -1.89
RFC1-202ENST00000381897 PRO2289Q9P1D8 64 aa3.25□□□□□ -1.89
RFC1-202ENST00000381897 DNAH10Q8IVF4 4471 aa3.25□□□□□ -1.89
RFC1-202ENST00000381897 KRTAP1-5Q9BYS1 174 aa3.24□□□□□ -1.89
RFC1-202ENST00000381897 Q6ZSA8 131 aa3.24□□□□□ -1.89
RFC1-202ENST00000381897 DMBT1Q9UGM3 2413 aaPredicted RBP3.22□□□□□ -1.89
RFC1-202ENST00000381897 KRTAP13-3Q3SY46 172 aa3.21□□□□□ -1.89
RFC1-202ENST00000381897 CMYA5Q8N3K9 4069 aa3.2□□□□□ -1.9
RFC1-202ENST00000381897 LCE2DQ5TA82 110 aaPredicted RBP3.2□□□□□ -1.9
RFC1-202ENST00000381897 TGP01266 2768 aa3.19□□□□□ -1.9
RFC1-202ENST00000381897 RPL37P61927 97 aaKnown RBP3.19□□□□□ -1.9
RFC1-202ENST00000381897 HUWE1Q7Z6Z7 4374 aaKnown RBP3.18□□□□□ -1.9
RFC1-202ENST00000381897 INE1O15225 51 aa3.18□□□□□ -1.9
RFC1-202ENST00000381897 DNAH7Q8WXX0 4024 aa3.16□□□□□ -1.9
RFC1-202ENST00000381897 Q6ZRN7 208 aaPredicted RBP3.15□□□□□ -1.91
RFC1-202ENST00000381897 H0YAA0 97 aa3.14□□□□□ -1.91
RFC1-202ENST00000381897 DNAH9Q9NYC9 4486 aa3.14□□□□□ -1.91
RFC1-202ENST00000381897 RPS29P62273 56 aaKnown RBP3.13□□□□□ -1.91
RFC1-202ENST00000381897 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
RFC1-202ENST00000381897 C9orf92A6NGG3 77 aa3.12□□□□□ -1.91
RFC1-202ENST00000381897 PLECQ15149 4684 aaKnown RBP3.11□□□□□ -1.91
RFC1-202ENST00000381897 KRTAP3-1Q9BYR8 98 aa3.1□□□□□ -1.91
RFC1-202ENST00000381897 FRAS1Q86XX4 4008 aa3.09□□□□□ -1.91
RFC1-202ENST00000381897 P0C880 135 aa3.08□□□□□ -1.92
RFC1-202ENST00000381897 FBN3Q75N90 2809 aa3.08□□□□□ -1.92
RFC1-202ENST00000381897 KRTAP13-2Q52LG2 175 aa3.08□□□□□ -1.92
RFC1-202ENST00000381897 KMT2AQ03164 3969 aa3.08□□□□□ -1.92
RFC1-202ENST00000381897 S4R3F8 94 aa3.08□□□□□ -1.92
RFC1-202ENST00000381897 KRTAP10-1P60331 282 aa3.07□□□□□ -1.92
RFC1-202ENST00000381897 STARD9Q9P2P6 4700 aa3.06□□□□□ -1.92
RFC1-202ENST00000381897 MEGF8Q7Z7M0 2845 aa3.06□□□□□ -1.92
RFC1-202ENST00000381897 PRKDCP78527 4128 aaKnown RBP3.05□□□□□ -1.92
RFC1-202ENST00000381897 DNAH3Q8TD57 4116 aa3.05□□□□□ -1.92
RFC1-202ENST00000381897 DNAH1Q9P2D7 4330 aa3.05□□□□□ -1.92
RFC1-202ENST00000381897 DNHD1Q96M86 4753 aa3.03□□□□□ -1.92
RFC1-202ENST00000381897 LCE2CQ5TA81 110 aa3.03□□□□□ -1.92
RFC1-202ENST00000381897 MT3P25713 68 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms