RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ZNF861PO60384 105 aa11.19□□□□□ -0.62
SMARCD1-201ENST00000381513 KRTAP1-5Q9BYS1 174 aa11.18□□□□□ -0.62
SMARCD1-201ENST00000381513 NBEAL1Q6ZS30 2694 aa11.18□□□□□ -0.62
SMARCD1-201ENST00000381513 KRTAP13-3Q3SY46 172 aa11.17□□□□□ -0.62
SMARCD1-201ENST00000381513 SPINK1P00995 79 aa11.14□□□□□ -0.63
SMARCD1-201ENST00000381513 PANO1I0J062 215 aa11.14□□□□□ -0.63
SMARCD1-201ENST00000381513 KRTAP13-1Q8IUC0 172 aa11.13□□□□□ -0.63
SMARCD1-201ENST00000381513 FLG2Q5D862 2391 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-201ENST00000381513 C14orf177Q52M58 125 aa11.11□□□□□ -0.63
SMARCD1-201ENST00000381513 UBE2DNLQ8IWF7 75 aa11.11□□□□□ -0.63
SMARCD1-201ENST00000381513 WWC2-AS2Q96NR7 200 aa11.11□□□□□ -0.63
SMARCD1-201ENST00000381513 CIRBP-AS1Q8TBR5 109 aa11.09□□□□□ -0.63
SMARCD1-201ENST00000381513 DNAH10Q8IVF4 4471 aa11.08□□□□□ -0.64
SMARCD1-201ENST00000381513 IGKV2D-30A0A075B6S6 120 aa11.08□□□□□ -0.64
SMARCD1-201ENST00000381513 IGKV2-30P06310 120 aa11.08□□□□□ -0.64
SMARCD1-201ENST00000381513 FAM229AH3BQW9 127 aa11.07□□□□□ -0.64
SMARCD1-201ENST00000381513 ROMO1P60602 79 aa11.07□□□□□ -0.64
SMARCD1-201ENST00000381513 ALMS1Q8TCU4 4167 aa11.06□□□□□ -0.64
SMARCD1-201ENST00000381513 IGLV7-43P04211 117 aa11.03□□□□□ -0.64
SMARCD1-201ENST00000381513 LINC00483Q53H64 154 aa11.03□□□□□ -0.64
SMARCD1-201ENST00000381513 KRTAP25-1Q3LHN0 102 aa11.02□□□□□ -0.65
SMARCD1-201ENST00000381513 STAB1Q9NY15 2570 aa11□□□□□ -0.65
SMARCD1-201ENST00000381513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.98□□□□□ -0.65
SMARCD1-201ENST00000381513 CRIPTQ9P021 101 aa10.97□□□□□ -0.65
SMARCD1-201ENST00000381513 ANK2Q01484 3957 aa10.97□□□□□ -0.65
SMARCD1-201ENST00000381513 DNAH1Q9P2D7 4330 aa10.95□□□□□ -0.66
SMARCD1-201ENST00000381513 PSORS1C2Q9UIG4 136 aa10.94□□□□□ -0.66
SMARCD1-201ENST00000381513 STAB2Q8WWQ8 2551 aa10.89□□□□□ -0.67
SMARCD1-201ENST00000381513 IGLV5-52A0A0A0MRZ9 124 aa10.88□□□□□ -0.67
SMARCD1-201ENST00000381513 LINC00304Q8N9R0 145 aa10.88□□□□□ -0.67
SMARCD1-201ENST00000381513 A8MUU9 505 aa10.88□□□□□ -0.67
SMARCD1-201ENST00000381513 LYSTQ99698 3801 aa10.87□□□□□ -0.67
SMARCD1-201ENST00000381513 Q8N1X5 172 aa10.86□□□□□ -0.67
SMARCD1-201ENST00000381513 SPACA4Q8TDM5 124 aa10.85□□□□□ -0.67
SMARCD1-201ENST00000381513 H0YAA0 97 aa10.82□□□□□ -0.68
SMARCD1-201ENST00000381513 LY6G6CO95867 125 aa10.82□□□□□ -0.68
SMARCD1-201ENST00000381513 Q6ZSA8 131 aa10.8□□□□□ -0.68
SMARCD1-201ENST00000381513 SSBP3-AS1Q7Z2R9 100 aa10.8□□□□□ -0.68
SMARCD1-201ENST00000381513 TGP01266 2768 aa10.8□□□□□ -0.68
SMARCD1-201ENST00000381513 P0C880 135 aa10.75□□□□□ -0.69
SMARCD1-201ENST00000381513 DNAH9Q9NYC9 4486 aa10.73□□□□□ -0.69
SMARCD1-201ENST00000381513 A0A1B0GU33 70 aa10.72□□□□□ -0.69
SMARCD1-201ENST00000381513 MEGF8Q7Z7M0 2845 aa10.7□□□□□ -0.7
SMARCD1-201ENST00000381513 NBDYA0A0U1RRE5 68 aa10.69□□□□□ -0.7
SMARCD1-201ENST00000381513 TYMSOSQ8TAI1 123 aa10.69□□□□□ -0.7
SMARCD1-201ENST00000381513 K7ERS5 55 aa10.68□□□□□ -0.7
SMARCD1-201ENST00000381513 MGAM2Q2M2H8 2515 aa10.68□□□□□ -0.7
SMARCD1-201ENST00000381513 SPINT4Q6UDR6 99 aa10.67□□□□□ -0.7
SMARCD1-201ENST00000381513 FRAS1Q86XX4 4008 aa10.66□□□□□ -0.7
SMARCD1-201ENST00000381513 APLNQ9ULZ1 77 aa10.66□□□□□ -0.7
SMARCD1-201ENST00000381513 KRTAP16-1A8MUX0 517 aa10.64□□□□□ -0.71
SMARCD1-201ENST00000381513 Q6ZRN7 208 aaPredicted RBP10.59□□□□□ -0.71
SMARCD1-201ENST00000381513 DMBT1Q9UGM3 2413 aaPredicted RBP10.59□□□□□ -0.71
SMARCD1-201ENST00000381513 DNAH8Q96JB1 4490 aa10.58□□□□□ -0.72
SMARCD1-201ENST00000381513 H1FX-AS1Q4G0G2 97 aa10.57□□□□□ -0.72
SMARCD1-201ENST00000381513 A0A087WTM6 91 aa10.57□□□□□ -0.72
SMARCD1-201ENST00000381513 KRTAP24-1Q3LI83 254 aa10.56□□□□□ -0.72
SMARCD1-201ENST00000381513 HUWE1Q7Z6Z7 4374 aaKnown RBP10.55□□□□□ -0.72
SMARCD1-201ENST00000381513 NDUFAF8A1L188 74 aa10.5□□□□□ -0.73
SMARCD1-201ENST00000381513 CMYA5Q8N3K9 4069 aa10.45□□□□□ -0.74
SMARCD1-201ENST00000381513 KRTAP13-2Q52LG2 175 aa10.44□□□□□ -0.74
SMARCD1-201ENST00000381513 FBN3Q75N90 2809 aa10.43□□□□□ -0.74
SMARCD1-201ENST00000381513 DNAH7Q8WXX0 4024 aa10.4□□□□□ -0.74
SMARCD1-201ENST00000381513 DNAH17Q9UFH2 4485 aa10.4□□□□□ -0.75
SMARCD1-201ENST00000381513 NUPR2A6NF83 97 aa10.36□□□□□ -0.75
SMARCD1-201ENST00000381513 COX6B2Q6YFQ2 88 aa10.36□□□□□ -0.75
SMARCD1-201ENST00000381513 C20orf166-AS1Q96NR2 134 aa10.35□□□□□ -0.75
SMARCD1-201ENST00000381513 A0A0D9SG42 100 aa10.33□□□□□ -0.76
SMARCD1-201ENST00000381513 C10orf95Q9H7T3 257 aa10.31□□□□□ -0.76
SMARCD1-201ENST00000381513 TPRXLQ17RH7 258 aa10.3□□□□□ -0.76
SMARCD1-201ENST00000381513 DNAH3Q8TD57 4116 aa10.27□□□□□ -0.77
SMARCD1-201ENST00000381513 PLECQ15149 4684 aaKnown RBP10.27□□□□□ -0.77
SMARCD1-201ENST00000381513 RPL37P61927 97 aaKnown RBP10.25□□□□□ -0.77
SMARCD1-201ENST00000381513 KRTAP3-1Q9BYR8 98 aa10.24□□□□□ -0.77
SMARCD1-201ENST00000381513 C9orf92A6NGG3 77 aa10.2□□□□□ -0.78
SMARCD1-201ENST00000381513 A0A0A0MQY5 61 aa10.19□□□□□ -0.78
SMARCD1-201ENST00000381513 HECTD4Q9Y4D8 3996 aa10.18□□□□□ -0.78
SMARCD1-201ENST00000381513 KRTAP15-1Q3LI76 137 aa10.15□□□□□ -0.78
SMARCD1-201ENST00000381513 VPS13DQ5THJ4 4388 aa10.09□□□□□ -0.79
SMARCD1-201ENST00000381513 KRTAP1-4P0C5Y4 121 aa10.09□□□□□ -0.79
SMARCD1-201ENST00000381513 KRTAP10-2P60368 255 aa10.03□□□□□ -0.8
SMARCD1-201ENST00000381513 KRTAP13-4Q3LI77 160 aa10.03□□□□□ -0.8
SMARCD1-201ENST00000381513 KMT2AQ03164 3969 aa9.99□□□□□ -0.81
SMARCD1-201ENST00000381513 DNAH2Q9P225 4427 aa9.98□□□□□ -0.81
SMARCD1-201ENST00000381513 DNAH11Q96DT5 4516 aa9.98□□□□□ -0.81
SMARCD1-201ENST00000381513 STARD9Q9P2P6 4700 aa9.93□□□□□ -0.82
SMARCD1-201ENST00000381513 KRTAP10-6P60371 365 aaPredicted RBP9.92□□□□□ -0.82
SMARCD1-201ENST00000381513 DNAH6Q9C0G6 4158 aa9.91□□□□□ -0.82
SMARCD1-201ENST00000381513 DYNC2H1Q8NCM8 4307 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-201ENST00000381513 KRTAP10-1P60331 282 aa9.89□□□□□ -0.83
SMARCD1-201ENST00000381513 S4R3F8 94 aa9.88□□□□□ -0.83
SMARCD1-201ENST00000381513 LRP1BQ9NZR2 4599 aa9.88□□□□□ -0.83
SMARCD1-201ENST00000381513 DNHD1Q96M86 4753 aa9.85□□□□□ -0.83
SMARCD1-201ENST00000381513 LUZP6Q538Z0 58 aa9.82□□□□□ -0.84
SMARCD1-201ENST00000381513 KRTAP12-2P59991 146 aa9.8□□□□□ -0.84
SMARCD1-201ENST00000381513 KRTAP3-2Q9BYR7 98 aa9.75□□□□□ -0.85
SMARCD1-201ENST00000381513 PRKDCP78527 4128 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-201ENST00000381513 DNAH5Q8TE73 4624 aa9.71□□□□□ -0.85
SMARCD1-201ENST00000381513 VPS13BQ7Z7G8 4022 aa9.71□□□□□ -0.85
SMARCD1-201ENST00000381513 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8313 ms