RNA–Protein interactions for RNA: ENST00000380568.7

GCOM1-201, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GCOM1, Length 1,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-201ENST00000380568 RYR3Q15413 4870 aa11□□□□□ -0.65
GCOM1-201ENST00000380568 IGHV6-1A0A0B4J1U7 121 aa10.99□□□□□ -0.65
GCOM1-201ENST00000380568 TMEM254Q8TBM7 123 aa10.98□□□□□ -0.65
GCOM1-201ENST00000380568 KLKP1Q107X0 134 aa10.96□□□□□ -0.65
GCOM1-201ENST00000380568 C5orf47Q569G3 176 aa10.95□□□□□ -0.66
GCOM1-201ENST00000380568 Q8N1X5 172 aa10.95□□□□□ -0.66
GCOM1-201ENST00000380568 TP53AIP1Q9HCN2 124 aa10.95□□□□□ -0.66
GCOM1-201ENST00000380568 C20orf197Q8N268 126 aa10.94□□□□□ -0.66
GCOM1-201ENST00000380568 MRPL34Q9BQ48 92 aaKnown RBP10.93□□□□□ -0.66
GCOM1-201ENST00000380568 NDUFC1O43677 76 aa10.91□□□□□ -0.66
GCOM1-201ENST00000380568 H3BPC8 53 aa10.89□□□□□ -0.67
GCOM1-201ENST00000380568 LINC00313P59037 77 aa10.89□□□□□ -0.67
GCOM1-201ENST00000380568 FAT1Q14517 4588 aa10.88□□□□□ -0.67
GCOM1-201ENST00000380568 PKHD1L1Q86WI1 4243 aa10.87□□□□□ -0.67
GCOM1-201ENST00000380568 MP68P56378 58 aa10.87□□□□□ -0.67
GCOM1-201ENST00000380568 A0A0U1RQV1 116 aa10.85□□□□□ -0.67
GCOM1-201ENST00000380568 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
GCOM1-201ENST00000380568 HSPG2P98160 4391 aa10.83□□□□□ -0.68
GCOM1-201ENST00000380568 TMEM258P61165 79 aa10.83□□□□□ -0.68
GCOM1-201ENST00000380568 RYR1P21817 5038 aa10.83□□□□□ -0.68
GCOM1-201ENST00000380568 TRAV22A0A0B4J277 110 aa10.81□□□□□ -0.68
GCOM1-201ENST00000380568 NOTCH2NLQ7Z3S9 236 aa10.8□□□□□ -0.68
GCOM1-201ENST00000380568 NDUFS5O43920 106 aa10.79□□□□□ -0.68
GCOM1-201ENST00000380568 SNURFQ9Y675 71 aa10.79□□□□□ -0.68
GCOM1-201ENST00000380568 H0Y9P7 68 aa10.78□□□□□ -0.68
GCOM1-201ENST00000380568 Q8N9P0 234 aaPredicted RBP10.77□□□□□ -0.69
GCOM1-201ENST00000380568 H7BZZ5 65 aa10.75□□□□□ -0.69
GCOM1-201ENST00000380568 ZCCHC13Q8WW36 166 aaKnown RBP10.75□□□□□ -0.69
GCOM1-201ENST00000380568 CYSTM1Q9H1C7 97 aa10.74□□□□□ -0.69
GCOM1-201ENST00000380568 OXTP01178 125 aa10.74□□□□□ -0.69
GCOM1-201ENST00000380568 ATP5EP56381 51 aaPredicted RBP10.73□□□□□ -0.69
GCOM1-201ENST00000380568 KRTAP16-1A8MUX0 517 aa10.72□□□□□ -0.69
GCOM1-201ENST00000380568 FP248Q71RG6 208 aaPredicted RBP10.7□□□□□ -0.7
GCOM1-201ENST00000380568 LINC00208Q96KT6 92 aa10.7□□□□□ -0.7
GCOM1-201ENST00000380568 KRTAP17-1Q9BYP8 105 aa10.68□□□□□ -0.7
GCOM1-201ENST00000380568 C1orf64Q8NEQ6 169 aa10.67□□□□□ -0.7
GCOM1-201ENST00000380568 FAM236DA0A1B0GTK5 79 aa10.64□□□□□ -0.71
GCOM1-201ENST00000380568 FAM236CP0DP71 79 aa10.64□□□□□ -0.71
GCOM1-201ENST00000380568 LOC101927531A0A1B0GV80 90 aa10.63□□□□□ -0.71
GCOM1-201ENST00000380568 KIAA1109Q2LD37 5005 aa10.62□□□□□ -0.71
GCOM1-201ENST00000380568 MT1HL1P0DM35 61 aa10.62□□□□□ -0.71
GCOM1-201ENST00000380568 FLG2Q5D862 2391 aaPredicted RBP10.61□□□□□ -0.71
GCOM1-201ENST00000380568 KRTAP13-3Q3SY46 172 aa10.6□□□□□ -0.71
GCOM1-201ENST00000380568 EPPK1P58107 5090 aaKnown RBP10.59□□□□□ -0.71
GCOM1-201ENST00000380568 SPANXA2-OT1Q8N9U9 137 aa10.57□□□□□ -0.72
GCOM1-201ENST00000380568 RETNLBQ9BQ08 111 aa10.57□□□□□ -0.72
GCOM1-201ENST00000380568 C20orf166-AS1Q96NR2 134 aa10.56□□□□□ -0.72
GCOM1-201ENST00000380568 Q5W150 140 aa10.54□□□□□ -0.72
GCOM1-201ENST00000380568 A8MUU9 505 aa10.53□□□□□ -0.72
GCOM1-201ENST00000380568 RPS28P62857 69 aaKnown RBP10.53□□□□□ -0.72
GCOM1-201ENST00000380568 TNXBP22105 4242 aa10.53□□□□□ -0.72
GCOM1-201ENST00000380568 FAT3Q8TDW7 4589 aa10.49□□□□□ -0.73
GCOM1-201ENST00000380568 C9orf92A6NGG3 77 aa10.48□□□□□ -0.73
GCOM1-201ENST00000380568 CYP4F30PQ9H0H9 118 aa10.48□□□□□ -0.73
GCOM1-201ENST00000380568 Q75L30 129 aa10.48□□□□□ -0.73
GCOM1-201ENST00000380568 SERP1Q9Y6X1 66 aa10.48□□□□□ -0.73
GCOM1-201ENST00000380568 IGLV7-46A0A075B6I9 117 aa10.47□□□□□ -0.73
GCOM1-201ENST00000380568 IGKV2-30P06310 120 aa10.46□□□□□ -0.74
GCOM1-201ENST00000380568 LRP1Q07954 4544 aaKnown RBP10.45□□□□□ -0.74
GCOM1-201ENST00000380568 KRTAP4-5Q9BYR2 181 aa10.43□□□□□ -0.74
GCOM1-201ENST00000380568 PCOTHQ58A44 107 aa10.4□□□□□ -0.74
GCOM1-201ENST00000380568 C7orf65Q6ZTY9 151 aa10.38□□□□□ -0.75
GCOM1-201ENST00000380568 DMBT1Q9UGM3 2413 aaPredicted RBP10.37□□□□□ -0.75
GCOM1-201ENST00000380568 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
GCOM1-201ENST00000380568 BIRC6Q9NR09 4857 aa10.33□□□□□ -0.76
GCOM1-201ENST00000380568 J3QL48 77 aa10.33□□□□□ -0.76
GCOM1-201ENST00000380568 PRR4Q16378 134 aa10.33□□□□□ -0.76
GCOM1-201ENST00000380568 IGKV2D-30A0A075B6S6 120 aa10.32□□□□□ -0.76
GCOM1-201ENST00000380568 RPL37P61927 97 aaKnown RBP10.32□□□□□ -0.76
GCOM1-201ENST00000380568 XP32Q5T750 250 aa10.29□□□□□ -0.76
GCOM1-201ENST00000380568 ATP11AUNQ6ZP68 121 aa10.29□□□□□ -0.76
GCOM1-201ENST00000380568 MYCBP2O75592 4640 aa10.28□□□□□ -0.76
GCOM1-201ENST00000380568 HRES1P13985 223 aa10.28□□□□□ -0.76
GCOM1-201ENST00000380568 HERC2O95714 4834 aa10.22□□□□□ -0.77
GCOM1-201ENST00000380568 SMIM26A0A096LP01 95 aa10.22□□□□□ -0.77
GCOM1-201ENST00000380568 DMAC1Q96GE9 116 aa10.22□□□□□ -0.77
GCOM1-201ENST00000380568 ACYP2P14621 99 aa10.2□□□□□ -0.78
GCOM1-201ENST00000380568 A8MUN3 132 aa10.17□□□□□ -0.78
GCOM1-201ENST00000380568 SPINK7P58062 85 aa10.17□□□□□ -0.78
GCOM1-201ENST00000380568 COA5Q86WW8 74 aa10.15□□□□□ -0.78
GCOM1-201ENST00000380568 ABCA13Q86UQ4 5058 aa10.06□□□□□ -0.8
GCOM1-201ENST00000380568 V9GYY9 64 aa10.05□□□□□ -0.8
GCOM1-201ENST00000380568 CHKB-CPT1BH3BT56 60 aa10.02□□□□□ -0.81
GCOM1-201ENST00000380568 C4orf26Q17RF5 130 aa10.01□□□□□ -0.81
GCOM1-201ENST00000380568 SEC61BP60468 96 aaKnown RBP9.99□□□□□ -0.81
GCOM1-201ENST00000380568 Q1T7F1 81 aa9.99□□□□□ -0.81
GCOM1-201ENST00000380568 COX6B2Q6YFQ2 88 aa9.98□□□□□ -0.81
GCOM1-201ENST00000380568 SPTSSBQ8NFR3 76 aa9.91□□□□□ -0.82
GCOM1-201ENST00000380568 MPLKIPQ8TAP9 179 aa9.89□□□□□ -0.83
GCOM1-201ENST00000380568 KRTAP3-1Q9BYR8 98 aa9.85□□□□□ -0.83
GCOM1-201ENST00000380568 LINC01558Q9Y6Z2 57 aa9.83□□□□□ -0.84
GCOM1-201ENST00000380568 RBM12B-AS1Q9P1G2 102 aa9.82□□□□□ -0.84
GCOM1-201ENST00000380568 PRR15LQ9BU68 103 aa9.72□□□□□ -0.85
GCOM1-201ENST00000380568 H1FX-AS1Q4G0G2 97 aa9.71□□□□□ -0.86
GCOM1-201ENST00000380568 LRP2P98164 4655 aa9.7□□□□□ -0.86
GCOM1-201ENST00000380568 PCLOQ9Y6V0 5065 aa9.67□□□□□ -0.86
GCOM1-201ENST00000380568 PSPHP1O15172 72 aa9.67□□□□□ -0.86
GCOM1-201ENST00000380568 LPAP08519 4548 aa9.67□□□□□ -0.86
GCOM1-201ENST00000380568 S4R3F8 94 aa9.66□□□□□ -0.86
GCOM1-201ENST00000380568 A0A1B0GU69 56 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms