RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 A0A087X002 238 aa7.52□□□□□ -1.21
PRPF40B-202ENST00000380281 NOTCH2NLQ7Z3S9 236 aa7.52□□□□□ -1.21
PRPF40B-202ENST00000380281 CDK2AP2O75956 126 aa7.52□□□□□ -1.21
PRPF40B-202ENST00000380281 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
PRPF40B-202ENST00000380281 DNAH3Q8TD57 4116 aa7.5□□□□□ -1.21
PRPF40B-202ENST00000380281 CIRBP-AS1Q8TBR5 109 aa7.49□□□□□ -1.21
PRPF40B-202ENST00000380281 PSORS1C2Q9UIG4 136 aa7.49□□□□□ -1.21
PRPF40B-202ENST00000380281 FRAS1Q86XX4 4008 aa7.47□□□□□ -1.21
PRPF40B-202ENST00000380281 RTL8CO15255 209 aa7.45□□□□□ -1.22
PRPF40B-202ENST00000380281 C8orf17Q9NRJ1 99 aa7.45□□□□□ -1.22
PRPF40B-202ENST00000380281 A0A087WTM6 91 aa7.44□□□□□ -1.22
PRPF40B-202ENST00000380281 SPRR1BP22528 89 aa7.44□□□□□ -1.22
PRPF40B-202ENST00000380281 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
PRPF40B-202ENST00000380281 Q6ZRN7 208 aaPredicted RBP7.43□□□□□ -1.22
PRPF40B-202ENST00000380281 SPACA4Q8TDM5 124 aa7.42□□□□□ -1.22
PRPF40B-202ENST00000380281 Q96NJ1 140 aa7.42□□□□□ -1.22
PRPF40B-202ENST00000380281 KMT2AQ03164 3969 aa7.42□□□□□ -1.22
PRPF40B-202ENST00000380281 STARD9Q9P2P6 4700 aa7.41□□□□□ -1.22
PRPF40B-202ENST00000380281 TP53AIP1Q9HCN2 124 aa7.41□□□□□ -1.22
PRPF40B-202ENST00000380281 Q6ZR54 194 aa7.41□□□□□ -1.22
PRPF40B-202ENST00000380281 KRTAP13-1Q8IUC0 172 aa7.4□□□□□ -1.22
PRPF40B-202ENST00000380281 LY6G6CO95867 125 aa7.4□□□□□ -1.23
PRPF40B-202ENST00000380281 IGLV5-52A0A0A0MRZ9 124 aa7.39□□□□□ -1.23
PRPF40B-202ENST00000380281 WWC2-AS2Q96NR7 200 aa7.39□□□□□ -1.23
PRPF40B-202ENST00000380281 A0A1B0GVX0 72 aa7.38□□□□□ -1.23
PRPF40B-202ENST00000380281 NUPR2A6NF83 97 aa7.38□□□□□ -1.23
PRPF40B-202ENST00000380281 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
PRPF40B-202ENST00000380281 MRPL34Q9BQ48 92 aaKnown RBP7.36□□□□□ -1.23
PRPF40B-202ENST00000380281 PRKDCP78527 4128 aaKnown RBP7.36□□□□□ -1.23
PRPF40B-202ENST00000380281 Q5W150 140 aa7.36□□□□□ -1.23
PRPF40B-202ENST00000380281 ZNF861PO60384 105 aa7.34□□□□□ -1.23
PRPF40B-202ENST00000380281 ASB16-AS1Q495Z4 193 aa7.34□□□□□ -1.23
PRPF40B-202ENST00000380281 A0A1B0GU69 56 aa7.34□□□□□ -1.23
PRPF40B-202ENST00000380281 DNAH8Q96JB1 4490 aa7.31□□□□□ -1.24
PRPF40B-202ENST00000380281 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
PRPF40B-202ENST00000380281 ALMS1Q8TCU4 4167 aa7.3□□□□□ -1.24
PRPF40B-202ENST00000380281 ACYP2P14621 99 aa7.29□□□□□ -1.24
PRPF40B-202ENST00000380281 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
PRPF40B-202ENST00000380281 C1orf134Q5TEV5 83 aa7.29□□□□□ -1.24
PRPF40B-202ENST00000380281 SPATA8Q6RVD6 105 aa7.28□□□□□ -1.24
PRPF40B-202ENST00000380281 KRTAP10-2P60368 255 aa7.26□□□□□ -1.25
PRPF40B-202ENST00000380281 DNAH17Q9UFH2 4485 aa7.26□□□□□ -1.25
PRPF40B-202ENST00000380281 IGLV7-43P04211 117 aa7.26□□□□□ -1.25
PRPF40B-202ENST00000380281 LINC00483Q53H64 154 aa7.25□□□□□ -1.25
PRPF40B-202ENST00000380281 DNAH6Q9C0G6 4158 aa7.25□□□□□ -1.25
PRPF40B-202ENST00000380281 HECTD4Q9Y4D8 3996 aa7.25□□□□□ -1.25
PRPF40B-202ENST00000380281 DNAH11Q96DT5 4516 aa7.24□□□□□ -1.25
PRPF40B-202ENST00000380281 DNAH2Q9P225 4427 aa7.24□□□□□ -1.25
PRPF40B-202ENST00000380281 UQCR11O14957 56 aa7.23□□□□□ -1.25
PRPF40B-202ENST00000380281 VPS13DQ5THJ4 4388 aa7.23□□□□□ -1.25
PRPF40B-202ENST00000380281 IGKV2D-30A0A075B6S6 120 aa7.23□□□□□ -1.25
PRPF40B-202ENST00000380281 IGKV2-30P06310 120 aa7.23□□□□□ -1.25
PRPF40B-202ENST00000380281 DNHD1Q96M86 4753 aa7.22□□□□□ -1.25
PRPF40B-202ENST00000380281 SPINK1P00995 79 aa7.19□□□□□ -1.26
PRPF40B-202ENST00000380281 DMAC1Q96GE9 116 aa7.18□□□□□ -1.26
PRPF40B-202ENST00000380281 FLG2Q5D862 2391 aaPredicted RBP7.17□□□□□ -1.26
PRPF40B-202ENST00000380281 KRTAP13-3Q3SY46 172 aa7.17□□□□□ -1.26
PRPF40B-202ENST00000380281 KRTAP13-2Q52LG2 175 aa7.13□□□□□ -1.27
PRPF40B-202ENST00000380281 LRP1BQ9NZR2 4599 aa7.13□□□□□ -1.27
PRPF40B-202ENST00000380281 KRTAP10-1P60331 282 aa7.12□□□□□ -1.27
PRPF40B-202ENST00000380281 DYNC2H1Q8NCM8 4307 aaKnown RBP7.09□□□□□ -1.27
PRPF40B-202ENST00000380281 SMR3BP02814 79 aaPredicted RBP7.09□□□□□ -1.27
PRPF40B-202ENST00000380281 SSBP3-AS1Q7Z2R9 100 aa7.08□□□□□ -1.28
PRPF40B-202ENST00000380281 Q8N1X5 172 aa7.08□□□□□ -1.28
PRPF40B-202ENST00000380281 DMBT1Q9UGM3 2413 aaPredicted RBP7.08□□□□□ -1.28
PRPF40B-202ENST00000380281 ROMO1P60602 79 aa7.06□□□□□ -1.28
PRPF40B-202ENST00000380281 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
PRPF40B-202ENST00000380281 CRIPTQ9P021 101 aa7.04□□□□□ -1.28
PRPF40B-202ENST00000380281 HYDINQ4G0P3 5121 aa7.04□□□□□ -1.28
PRPF40B-202ENST00000380281 C9orf92A6NGG3 77 aa7.02□□□□□ -1.29
PRPF40B-202ENST00000380281 TYMSOSQ8TAI1 123 aa7.02□□□□□ -1.29
PRPF40B-202ENST00000380281 DNAH5Q8TE73 4624 aa7.02□□□□□ -1.29
PRPF40B-202ENST00000380281 KRTAP25-1Q3LHN0 102 aa7.01□□□□□ -1.29
PRPF40B-202ENST00000380281 VPS13BQ7Z7G8 4022 aa6.98□□□□□ -1.29
PRPF40B-202ENST00000380281 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.3
PRPF40B-202ENST00000380281 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
PRPF40B-202ENST00000380281 A8MUU9 505 aa6.95□□□□□ -1.3
PRPF40B-202ENST00000380281 FAT2Q9NYQ8 4349 aa6.94□□□□□ -1.3
PRPF40B-202ENST00000380281 H0YAA0 97 aa6.94□□□□□ -1.3
PRPF40B-202ENST00000380281 PKHD1P08F94 4074 aa6.93□□□□□ -1.3
PRPF40B-202ENST00000380281 KRTAP16-1A8MUX0 517 aa6.93□□□□□ -1.3
PRPF40B-202ENST00000380281 P0C880 135 aa6.92□□□□□ -1.3
PRPF40B-202ENST00000380281 Q6ZSA8 131 aa6.91□□□□□ -1.3
PRPF40B-202ENST00000380281 FAT1Q14517 4588 aa6.9□□□□□ -1.3
PRPF40B-202ENST00000380281 A0A0A0MQY5 61 aa6.82□□□□□ -1.32
PRPF40B-202ENST00000380281 PKD1P98161 4303 aa6.8□□□□□ -1.32
PRPF40B-202ENST00000380281 A0A1B0GU33 70 aa6.79□□□□□ -1.32
PRPF40B-202ENST00000380281 SPINT4Q6UDR6 99 aa6.74□□□□□ -1.33
PRPF40B-202ENST00000380281 MYCBP2O75592 4640 aa6.72□□□□□ -1.33
PRPF40B-202ENST00000380281 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.33
PRPF40B-202ENST00000380281 DYNC1H1Q14204 4646 aaKnown RBP6.71□□□□□ -1.34
PRPF40B-202ENST00000380281 NDUFAF8A1L188 74 aa6.69□□□□□ -1.34
PRPF40B-202ENST00000380281 K7ERS5 55 aa6.67□□□□□ -1.34
PRPF40B-202ENST00000380281 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
PRPF40B-202ENST00000380281 LRP1Q07954 4544 aaKnown RBP6.65□□□□□ -1.34
PRPF40B-202ENST00000380281 C10orf95Q9H7T3 257 aa6.62□□□□□ -1.35
PRPF40B-202ENST00000380281 SACSQ9NZJ4 4579 aa6.62□□□□□ -1.35
PRPF40B-202ENST00000380281 TPRXLQ17RH7 258 aa6.61□□□□□ -1.35
PRPF40B-202ENST00000380281 A0A0D9SG42 100 aa6.61□□□□□ -1.35
PRPF40B-202ENST00000380281 COX6B2Q6YFQ2 88 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms