RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 FAM236AA0A1B0GUQ0 79 aa13.9□□□□□ -0.19
ECHDC3-201ENST00000379215 FAM236BA0A1B0GV22 79 aa13.9□□□□□ -0.19
ECHDC3-201ENST00000379215 MYCBP2O75592 4640 aa13.88□□□□□ -0.19
ECHDC3-201ENST00000379215 HCG22E2RYF7 251 aa13.87□□□□□ -0.19
ECHDC3-201ENST00000379215 IGHV6-1A0A0B4J1U7 121 aa13.86□□□□□ -0.19
ECHDC3-201ENST00000379215 C8orf87E5RJ46 101 aa13.85□□□□□ -0.19
ECHDC3-201ENST00000379215 C8orf17Q9NRJ1 99 aa13.82□□□□□ -0.2
ECHDC3-201ENST00000379215 MMP24-AS1A0A0U1RRL7 71 aa13.79□□□□□ -0.2
ECHDC3-201ENST00000379215 ATOX1O00244 68 aa13.79□□□□□ -0.2
ECHDC3-201ENST00000379215 CASC2Q6XLA1 102 aa13.79□□□□□ -0.2
ECHDC3-201ENST00000379215 FP248Q71RG6 208 aaPredicted RBP13.78□□□□□ -0.2
ECHDC3-201ENST00000379215 hDV103S1A0JD37 113 aa13.76□□□□□ -0.21
ECHDC3-201ENST00000379215 J3QL48 77 aa13.76□□□□□ -0.21
ECHDC3-201ENST00000379215 WFDC13Q8IUB5 93 aa13.75□□□□□ -0.21
ECHDC3-201ENST00000379215 ABCA13Q86UQ4 5058 aa13.75□□□□□ -0.21
ECHDC3-201ENST00000379215 LINC00313P59037 77 aa13.75□□□□□ -0.21
ECHDC3-201ENST00000379215 RETNLBQ9BQ08 111 aa13.75□□□□□ -0.21
ECHDC3-201ENST00000379215 SMIM20Q8N5G0 67 aa13.72□□□□□ -0.21
ECHDC3-201ENST00000379215 TMEM254Q8TBM7 123 aa13.72□□□□□ -0.21
ECHDC3-201ENST00000379215 DMBT1Q9UGM3 2413 aaPredicted RBP13.7□□□□□ -0.22
ECHDC3-201ENST00000379215 NOTCH2NLQ7Z3S9 236 aa13.68□□□□□ -0.22
ECHDC3-201ENST00000379215 MRPL34Q9BQ48 92 aaKnown RBP13.67□□□□□ -0.22
ECHDC3-201ENST00000379215 ANAPC13Q9BS18 74 aa13.64□□□□□ -0.23
ECHDC3-201ENST00000379215 IGLV7-46A0A075B6I9 117 aa13.59□□□□□ -0.23
ECHDC3-201ENST00000379215 TRAV7A0A075B6U4 112 aa13.58□□□□□ -0.24
ECHDC3-201ENST00000379215 OCR1Q9BZK8 76 aa13.58□□□□□ -0.24
ECHDC3-201ENST00000379215 SERP2Q8N6R1 65 aa13.57□□□□□ -0.24
ECHDC3-201ENST00000379215 TP53AIP1Q9HCN2 124 aa13.57□□□□□ -0.24
ECHDC3-201ENST00000379215 KRTAP16-1A8MUX0 517 aa13.56□□□□□ -0.24
ECHDC3-201ENST00000379215 NDUFS5O43920 106 aa13.54□□□□□ -0.24
ECHDC3-201ENST00000379215 PRR4Q16378 134 aa13.53□□□□□ -0.24
ECHDC3-201ENST00000379215 Q8N9P0 234 aaPredicted RBP13.53□□□□□ -0.24
ECHDC3-201ENST00000379215 UQCRQO14949 82 aa13.52□□□□□ -0.25
ECHDC3-201ENST00000379215 C9orf92A6NGG3 77 aa13.51□□□□□ -0.25
ECHDC3-201ENST00000379215 COX7CP15954 63 aa13.48□□□□□ -0.25
ECHDC3-201ENST00000379215 PCP4P48539 62 aa13.46□□□□□ -0.25
ECHDC3-201ENST00000379215 KRTAP13-3Q3SY46 172 aa13.45□□□□□ -0.26
ECHDC3-201ENST00000379215 C5orf47Q569G3 176 aa13.43□□□□□ -0.26
ECHDC3-201ENST00000379215 C20orf166-AS1Q96NR2 134 aa13.42□□□□□ -0.26
ECHDC3-201ENST00000379215 TPRXLQ17RH7 258 aa13.42□□□□□ -0.26
ECHDC3-201ENST00000379215 A8MUU9 505 aa13.39□□□□□ -0.27
ECHDC3-201ENST00000379215 TRAV22A0A0B4J277 110 aa13.38□□□□□ -0.27
ECHDC3-201ENST00000379215 MP68P56378 58 aa13.38□□□□□ -0.27
ECHDC3-201ENST00000379215 Q75L30 129 aa13.36□□□□□ -0.27
ECHDC3-201ENST00000379215 H0Y9P7 68 aa13.33□□□□□ -0.28
ECHDC3-201ENST00000379215 PCLOQ9Y6V0 5065 aa13.33□□□□□ -0.28
ECHDC3-201ENST00000379215 H3BPC8 53 aa13.32□□□□□ -0.28
ECHDC3-201ENST00000379215 XP32Q5T750 250 aa13.3□□□□□ -0.28
ECHDC3-201ENST00000379215 C20orf197Q8N268 126 aa13.28□□□□□ -0.28
ECHDC3-201ENST00000379215 CCDC179H3BU77 68 aa13.27□□□□□ -0.29
ECHDC3-201ENST00000379215 ZCCHC13Q8WW36 166 aaKnown RBP13.27□□□□□ -0.29
ECHDC3-201ENST00000379215 RPL37P61927 97 aaKnown RBP13.24□□□□□ -0.29
ECHDC3-201ENST00000379215 Q5W150 140 aa13.24□□□□□ -0.29
ECHDC3-201ENST00000379215 KLKP1Q107X0 134 aa13.24□□□□□ -0.29
ECHDC3-201ENST00000379215 A0A0U1RQV1 116 aa13.23□□□□□ -0.29
ECHDC3-201ENST00000379215 LINC00208Q96KT6 92 aa13.21□□□□□ -0.29
ECHDC3-201ENST00000379215 C1orf64Q8NEQ6 169 aa13.2□□□□□ -0.3
ECHDC3-201ENST00000379215 ATP11AUNQ6ZP68 121 aa13.19□□□□□ -0.3
ECHDC3-201ENST00000379215 LOC101927531A0A1B0GV80 90 aa13.18□□□□□ -0.3
ECHDC3-201ENST00000379215 SNURFQ9Y675 71 aa13.17□□□□□ -0.3
ECHDC3-201ENST00000379215 NDUFC1O43677 76 aa13.13□□□□□ -0.31
ECHDC3-201ENST00000379215 IGKV2-30P06310 120 aa13.08□□□□□ -0.32
ECHDC3-201ENST00000379215 C7orf65Q6ZTY9 151 aa13.04□□□□□ -0.32
ECHDC3-201ENST00000379215 CYP4F30PQ9H0H9 118 aa13.03□□□□□ -0.32
ECHDC3-201ENST00000379215 IGKV2D-30A0A075B6S6 120 aa13.02□□□□□ -0.33
ECHDC3-201ENST00000379215 CYSTM1Q9H1C7 97 aa13.01□□□□□ -0.33
ECHDC3-201ENST00000379215 H7BZZ5 65 aa12.99□□□□□ -0.33
ECHDC3-201ENST00000379215 SEC61BP60468 96 aaKnown RBP12.99□□□□□ -0.33
ECHDC3-201ENST00000379215 HERC1Q15751 4861 aa12.98□□□□□ -0.33
ECHDC3-201ENST00000379215 LPAP08519 4548 aa12.96□□□□□ -0.34
ECHDC3-201ENST00000379215 PCOTHQ58A44 107 aa12.95□□□□□ -0.34
ECHDC3-201ENST00000379215 SPINK7P58062 85 aa12.92□□□□□ -0.34
ECHDC3-201ENST00000379215 TMEM258P61165 79 aa12.91□□□□□ -0.34
ECHDC3-201ENST00000379215 HMCN2Q8NDA2 5059 aa12.88□□□□□ -0.35
ECHDC3-201ENST00000379215 LRP2P98164 4655 aa12.88□□□□□ -0.35
ECHDC3-201ENST00000379215 SPANXA2-OT1Q8N9U9 137 aa12.87□□□□□ -0.35
ECHDC3-201ENST00000379215 ATP5EP56381 51 aaPredicted RBP12.84□□□□□ -0.35
ECHDC3-201ENST00000379215 HRES1P13985 223 aa12.81□□□□□ -0.36
ECHDC3-201ENST00000379215 FAM236DA0A1B0GTK5 79 aa12.79□□□□□ -0.36
ECHDC3-201ENST00000379215 FAM236CP0DP71 79 aa12.79□□□□□ -0.36
ECHDC3-201ENST00000379215 MUC17Q685J3 4493 aa12.7□□□□□ -0.38
ECHDC3-201ENST00000379215 C4orf26Q17RF5 130 aa12.66□□□□□ -0.38
ECHDC3-201ENST00000379215 A8MUN3 132 aa12.63□□□□□ -0.39
ECHDC3-201ENST00000379215 DMAC1Q96GE9 116 aa12.62□□□□□ -0.39
ECHDC3-201ENST00000379215 COX6B2Q6YFQ2 88 aa12.59□□□□□ -0.39
ECHDC3-201ENST00000379215 ACYP2P14621 99 aa12.56□□□□□ -0.4
ECHDC3-201ENST00000379215 RBM12B-AS1Q9P1G2 102 aa12.56□□□□□ -0.4
ECHDC3-201ENST00000379215 MPLKIPQ8TAP9 179 aa12.53□□□□□ -0.4
ECHDC3-201ENST00000379215 KRTAP4-1Q9BYQ7 146 aa12.51□□□□□ -0.41
ECHDC3-201ENST00000379215 SERP1Q9Y6X1 66 aa12.49□□□□□ -0.41
ECHDC3-201ENST00000379215 KRTAP3-1Q9BYR8 98 aa12.44□□□□□ -0.42
ECHDC3-201ENST00000379215 COA5Q86WW8 74 aa12.42□□□□□ -0.42
ECHDC3-201ENST00000379215 RPS28P62857 69 aaKnown RBP12.4□□□□□ -0.42
ECHDC3-201ENST00000379215 CHKB-CPT1BH3BT56 60 aa12.36□□□□□ -0.43
ECHDC3-201ENST00000379215 H1FX-AS1Q4G0G2 97 aa12.35□□□□□ -0.43
ECHDC3-201ENST00000379215 UBR4Q5T4S7 5183 aa12.24□□□□□ -0.45
ECHDC3-201ENST00000379215 SPTSSBQ8NFR3 76 aa12.22□□□□□ -0.45
ECHDC3-201ENST00000379215 S4R3F8 94 aa12.22□□□□□ -0.45
ECHDC3-201ENST00000379215 KRTAP19-2Q3LHN2 52 aa12.18□□□□□ -0.46
ECHDC3-201ENST00000379215 MUC2Q02817 5179 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms