RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 FAM229BQ4G0N7 80 aa12.52□□□□□ -0.41
CNTFR-202ENST00000378980 TP53AIP1Q9HCN2 124 aa12.52□□□□□ -0.41
CNTFR-202ENST00000378980 SPINK6Q6UWN8 80 aa12.5□□□□□ -0.41
CNTFR-202ENST00000378980 NOTCH2NLQ7Z3S9 236 aa12.49□□□□□ -0.41
CNTFR-202ENST00000378980 C1orf64Q8NEQ6 169 aa12.49□□□□□ -0.41
CNTFR-202ENST00000378980 MRPL34Q9BQ48 92 aaKnown RBP12.48□□□□□ -0.41
CNTFR-202ENST00000378980 FP248Q71RG6 208 aaPredicted RBP12.47□□□□□ -0.41
CNTFR-202ENST00000378980 SVIPQ8NHG7 77 aa12.47□□□□□ -0.41
CNTFR-202ENST00000378980 PKHD1P08F94 4074 aa12.46□□□□□ -0.41
CNTFR-202ENST00000378980 KRTAP1-4P0C5Y4 121 aa12.46□□□□□ -0.41
CNTFR-202ENST00000378980 CYP4F30PQ9H0H9 118 aa12.46□□□□□ -0.41
CNTFR-202ENST00000378980 NDUFS5O43920 106 aa12.43□□□□□ -0.42
CNTFR-202ENST00000378980 PRR4Q16378 134 aa12.42□□□□□ -0.42
CNTFR-202ENST00000378980 SPANXA2-OT1Q8N9U9 137 aa12.41□□□□□ -0.42
CNTFR-202ENST00000378980 LINC00336Q6ZUF6 198 aa12.39□□□□□ -0.43
CNTFR-202ENST00000378980 C8orf87E5RJ46 101 aa12.36□□□□□ -0.43
CNTFR-202ENST00000378980 C1orf195Q5TG92 126 aa12.34□□□□□ -0.43
CNTFR-202ENST00000378980 PLA2G1BP04054 148 aaKnown RBP12.33□□□□□ -0.44
CNTFR-202ENST00000378980 DYNC1H1Q14204 4646 aaKnown RBP12.31□□□□□ -0.44
CNTFR-202ENST00000378980 MPLKIPQ8TAP9 179 aa12.3□□□□□ -0.44
CNTFR-202ENST00000378980 LIMD2Q9BT23 127 aa12.3□□□□□ -0.44
CNTFR-202ENST00000378980 A0A1B0GVY2 172 aa12.28□□□□□ -0.44
CNTFR-202ENST00000378980 LINC00313P59037 77 aa12.26□□□□□ -0.45
CNTFR-202ENST00000378980 PCOTHQ58A44 107 aa12.26□□□□□ -0.45
CNTFR-202ENST00000378980 TYMSOSQ8TAI1 123 aa12.26□□□□□ -0.45
CNTFR-202ENST00000378980 IGLV7-46A0A075B6I9 117 aa12.25□□□□□ -0.45
CNTFR-202ENST00000378980 KRTAP13-3Q3SY46 172 aa12.25□□□□□ -0.45
CNTFR-202ENST00000378980 Q5W150 140 aa12.23□□□□□ -0.45
CNTFR-202ENST00000378980 C4orf48Q5BLP8 95 aa12.22□□□□□ -0.45
CNTFR-202ENST00000378980 LOC101927531A0A1B0GV80 90 aa12.2□□□□□ -0.46
CNTFR-202ENST00000378980 SPINK1P00995 79 aa12.2□□□□□ -0.46
CNTFR-202ENST00000378980 SMR3BP02814 79 aaPredicted RBP12.19□□□□□ -0.46
CNTFR-202ENST00000378980 RYR2Q92736 4967 aa12.19□□□□□ -0.46
CNTFR-202ENST00000378980 Q8N9P0 234 aaPredicted RBP12.18□□□□□ -0.46
CNTFR-202ENST00000378980 APOBP04114 4563 aaKnown RBP12.18□□□□□ -0.46
CNTFR-202ENST00000378980 PRR26Q8N8Z3 221 aa12.15□□□□□ -0.46
CNTFR-202ENST00000378980 KRTAP16-1A8MUX0 517 aa12.15□□□□□ -0.46
CNTFR-202ENST00000378980 Q1T7F1 81 aa12.15□□□□□ -0.46
CNTFR-202ENST00000378980 LINC00304Q8N9R0 145 aa12.12□□□□□ -0.47
CNTFR-202ENST00000378980 FAM229AH3BQW9 127 aa12.1□□□□□ -0.47
CNTFR-202ENST00000378980 KRTAP10-4P60372 401 aaPredicted RBP12.1□□□□□ -0.47
CNTFR-202ENST00000378980 RPS29P62273 56 aaKnown RBP12.09□□□□□ -0.47
CNTFR-202ENST00000378980 COA5Q86WW8 74 aa12.09□□□□□ -0.47
CNTFR-202ENST00000378980 FAT1Q14517 4588 aa12.09□□□□□ -0.47
CNTFR-202ENST00000378980 KMT2CQ8NEZ4 4911 aaKnown RBP12.07□□□□□ -0.48
CNTFR-202ENST00000378980 SPAG11AQ6PDA7 123 aa12.06□□□□□ -0.48
CNTFR-202ENST00000378980 RETNLBQ9BQ08 111 aa12.02□□□□□ -0.48
CNTFR-202ENST00000378980 PKHD1L1Q86WI1 4243 aa12.02□□□□□ -0.49
CNTFR-202ENST00000378980 V9GYY9 64 aa12.01□□□□□ -0.49
CNTFR-202ENST00000378980 IGKV2-30P06310 120 aa11.98□□□□□ -0.49
CNTFR-202ENST00000378980 PSPHP1O15172 72 aa11.97□□□□□ -0.49
CNTFR-202ENST00000378980 HRES1P13985 223 aa11.97□□□□□ -0.49
CNTFR-202ENST00000378980 BRK1Q8WUW1 75 aa11.96□□□□□ -0.5
CNTFR-202ENST00000378980 PRO0628Q9UI54 55 aa11.95□□□□□ -0.5
CNTFR-202ENST00000378980 A8MUN3 132 aa11.9□□□□□ -0.51
CNTFR-202ENST00000378980 DMAC1Q96GE9 116 aa11.85□□□□□ -0.51
CNTFR-202ENST00000378980 ACYP2P14621 99 aa11.83□□□□□ -0.51
CNTFR-202ENST00000378980 Q5VV11 94 aa11.83□□□□□ -0.51
CNTFR-202ENST00000378980 IGKV2D-30A0A075B6S6 120 aa11.83□□□□□ -0.52
CNTFR-202ENST00000378980 PRR15LQ9BU68 103 aa11.8□□□□□ -0.52
CNTFR-202ENST00000378980 LINC01558Q9Y6Z2 57 aa11.76□□□□□ -0.53
CNTFR-202ENST00000378980 C9orf92A6NGG3 77 aa11.74□□□□□ -0.53
CNTFR-202ENST00000378980 HSPG2P98160 4391 aa11.73□□□□□ -0.53
CNTFR-202ENST00000378980 C20orf166-AS1Q96NR2 134 aa11.72□□□□□ -0.53
CNTFR-202ENST00000378980 RYR3Q15413 4870 aa11.72□□□□□ -0.53
CNTFR-202ENST00000378980 A8MUU9 505 aa11.71□□□□□ -0.53
CNTFR-202ENST00000378980 CHKB-CPT1BH3BT56 60 aa11.71□□□□□ -0.53
CNTFR-202ENST00000378980 C7orf65Q6ZTY9 151 aa11.71□□□□□ -0.54
CNTFR-202ENST00000378980 Q75L30 129 aa11.71□□□□□ -0.54
CNTFR-202ENST00000378980 FLG2Q5D862 2391 aaPredicted RBP11.7□□□□□ -0.54
CNTFR-202ENST00000378980 Q5VSD8 79 aa11.69□□□□□ -0.54
CNTFR-202ENST00000378980 TNXBP22105 4242 aa11.67□□□□□ -0.54
CNTFR-202ENST00000378980 Q8N1X5 172 aa11.64□□□□□ -0.55
CNTFR-202ENST00000378980 LRP1Q07954 4544 aaKnown RBP11.64□□□□□ -0.55
CNTFR-202ENST00000378980 KRTAP10-8P60410 259 aa11.62□□□□□ -0.55
CNTFR-202ENST00000378980 RYR1P21817 5038 aa11.61□□□□□ -0.55
CNTFR-202ENST00000378980 FAT3Q8TDW7 4589 aa11.59□□□□□ -0.55
CNTFR-202ENST00000378980 A6NED7 52 aa11.56□□□□□ -0.56
CNTFR-202ENST00000378980 A8MU10 97 aa11.54□□□□□ -0.56
CNTFR-202ENST00000378980 KRTAP17-1Q9BYP8 105 aa11.5□□□□□ -0.57
CNTFR-202ENST00000378980 LCA10Q71F78 164 aa11.47□□□□□ -0.57
CNTFR-202ENST00000378980 SPINK7P58062 85 aa11.45□□□□□ -0.58
CNTFR-202ENST00000378980 CDC42SE1Q9NRR8 79 aa11.42□□□□□ -0.58
CNTFR-202ENST00000378980 KIAA1109Q2LD37 5005 aa11.41□□□□□ -0.58
CNTFR-202ENST00000378980 A0A1B0GU69 56 aa11.4□□□□□ -0.58
CNTFR-202ENST00000378980 DMBT1Q9UGM3 2413 aaPredicted RBP11.38□□□□□ -0.59
CNTFR-202ENST00000378980 SPTSSBQ8NFR3 76 aa11.35□□□□□ -0.59
CNTFR-202ENST00000378980 KRTAP3-1Q9BYR8 98 aa11.34□□□□□ -0.59
CNTFR-202ENST00000378980 MT1HL1P0DM35 61 aa11.33□□□□□ -0.6
CNTFR-202ENST00000378980 MYCBP2O75592 4640 aa11.33□□□□□ -0.6
CNTFR-202ENST00000378980 ATP11AUNQ6ZP68 121 aa11.31□□□□□ -0.6
CNTFR-202ENST00000378980 PMAIP1Q13794 54 aa11.29□□□□□ -0.6
CNTFR-202ENST00000378980 RPL37P61927 97 aaKnown RBP11.29□□□□□ -0.6
CNTFR-202ENST00000378980 XP32Q5T750 250 aa11.27□□□□□ -0.61
CNTFR-202ENST00000378980 EPPK1P58107 5090 aaKnown RBP11.27□□□□□ -0.61
CNTFR-202ENST00000378980 COX6B2Q6YFQ2 88 aa11.23□□□□□ -0.61
CNTFR-202ENST00000378980 UQCR11O14957 56 aa11.15□□□□□ -0.62
CNTFR-202ENST00000378980 SPATA8Q6RVD6 105 aa11.13□□□□□ -0.63
CNTFR-202ENST00000378980 SEC61GP60059 68 aa11.13□□□□□ -0.63
CNTFR-202ENST00000378980 A6NN06 94 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms