RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 SPINK1P00995 79 aa9.93□□□□□ -0.82
THUMPD2-201ENST00000378727 LINC00304Q8N9R0 145 aa9.93□□□□□ -0.82
THUMPD2-201ENST00000378727 LIMD2Q9BT23 127 aa9.93□□□□□ -0.82
THUMPD2-201ENST00000378727 C8orf17Q9NRJ1 99 aa9.92□□□□□ -0.82
THUMPD2-201ENST00000378727 EPPK1P58107 5090 aaKnown RBP9.92□□□□□ -0.82
THUMPD2-201ENST00000378727 CYSTM1Q9H1C7 97 aa9.92□□□□□ -0.82
THUMPD2-201ENST00000378727 NOTCH2NLQ7Z3S9 236 aa9.91□□□□□ -0.82
THUMPD2-201ENST00000378727 KIAA1109Q2LD37 5005 aa9.9□□□□□ -0.82
THUMPD2-201ENST00000378727 hDV103S1A0JD37 113 aa9.89□□□□□ -0.83
THUMPD2-201ENST00000378727 C20orf197Q8N268 126 aa9.89□□□□□ -0.83
THUMPD2-201ENST00000378727 SPAG11AQ6PDA7 123 aa9.87□□□□□ -0.83
THUMPD2-201ENST00000378727 RPS29P62273 56 aaKnown RBP9.87□□□□□ -0.83
THUMPD2-201ENST00000378727 TMEM254Q8TBM7 123 aa9.83□□□□□ -0.84
THUMPD2-201ENST00000378727 SNURFQ9Y675 71 aa9.83□□□□□ -0.84
THUMPD2-201ENST00000378727 KLKP1Q107X0 134 aa9.82□□□□□ -0.84
THUMPD2-201ENST00000378727 Q8N1X5 172 aa9.81□□□□□ -0.84
THUMPD2-201ENST00000378727 LRP1Q07954 4544 aaKnown RBP9.8□□□□□ -0.84
THUMPD2-201ENST00000378727 MRPL34Q9BQ48 92 aaKnown RBP9.79□□□□□ -0.84
THUMPD2-201ENST00000378727 A0A0U1RQV1 116 aa9.79□□□□□ -0.84
THUMPD2-201ENST00000378727 C8orf87E5RJ46 101 aa9.78□□□□□ -0.84
THUMPD2-201ENST00000378727 KRTAP10-8P60410 259 aa9.77□□□□□ -0.85
THUMPD2-201ENST00000378727 C5orf47Q569G3 176 aa9.77□□□□□ -0.85
THUMPD2-201ENST00000378727 LINC00313P59037 77 aa9.76□□□□□ -0.85
THUMPD2-201ENST00000378727 TNXBP22105 4242 aa9.74□□□□□ -0.85
THUMPD2-201ENST00000378727 H7BZZ5 65 aa9.73□□□□□ -0.85
THUMPD2-201ENST00000378727 FLG2Q5D862 2391 aaPredicted RBP9.72□□□□□ -0.85
THUMPD2-201ENST00000378727 NDUFS5O43920 106 aa9.72□□□□□ -0.85
THUMPD2-201ENST00000378727 TP53AIP1Q9HCN2 124 aa9.71□□□□□ -0.85
THUMPD2-201ENST00000378727 ZCCHC13Q8WW36 166 aaKnown RBP9.71□□□□□ -0.86
THUMPD2-201ENST00000378727 KRTAP16-1A8MUX0 517 aa9.7□□□□□ -0.86
THUMPD2-201ENST00000378727 FAT3Q8TDW7 4589 aa9.7□□□□□ -0.86
THUMPD2-201ENST00000378727 H0Y9P7 68 aa9.7□□□□□ -0.86
THUMPD2-201ENST00000378727 MP68P56378 58 aa9.68□□□□□ -0.86
THUMPD2-201ENST00000378727 TRAV22A0A0B4J277 110 aa9.68□□□□□ -0.86
THUMPD2-201ENST00000378727 TMEM258P61165 79 aa9.67□□□□□ -0.86
THUMPD2-201ENST00000378727 RETNLBQ9BQ08 111 aa9.67□□□□□ -0.86
THUMPD2-201ENST00000378727 NDUFC1O43677 76 aa9.66□□□□□ -0.86
THUMPD2-201ENST00000378727 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
THUMPD2-201ENST00000378727 LINC00208Q96KT6 92 aa9.65□□□□□ -0.86
THUMPD2-201ENST00000378727 MT1HL1P0DM35 61 aa9.63□□□□□ -0.87
THUMPD2-201ENST00000378727 MYCBP2O75592 4640 aa9.63□□□□□ -0.87
THUMPD2-201ENST00000378727 KRTAP4-5Q9BYR2 181 aa9.63□□□□□ -0.87
THUMPD2-201ENST00000378727 H3BPC8 53 aa9.62□□□□□ -0.87
THUMPD2-201ENST00000378727 Q5W150 140 aa9.62□□□□□ -0.87
THUMPD2-201ENST00000378727 C1orf64Q8NEQ6 169 aa9.6□□□□□ -0.87
THUMPD2-201ENST00000378727 KRTAP13-3Q3SY46 172 aa9.6□□□□□ -0.87
THUMPD2-201ENST00000378727 DMBT1Q9UGM3 2413 aaPredicted RBP9.57□□□□□ -0.88
THUMPD2-201ENST00000378727 FAM236DA0A1B0GTK5 79 aa9.56□□□□□ -0.88
THUMPD2-201ENST00000378727 FAM236CP0DP71 79 aa9.56□□□□□ -0.88
THUMPD2-201ENST00000378727 C9orf92A6NGG3 77 aa9.54□□□□□ -0.88
THUMPD2-201ENST00000378727 OXTP01178 125 aa9.5□□□□□ -0.89
THUMPD2-201ENST00000378727 BIRC6Q9NR09 4857 aa9.47□□□□□ -0.89
THUMPD2-201ENST00000378727 ATP5EP56381 51 aaPredicted RBP9.46□□□□□ -0.89
THUMPD2-201ENST00000378727 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.89
THUMPD2-201ENST00000378727 LOC101927531A0A1B0GV80 90 aa9.46□□□□□ -0.9
THUMPD2-201ENST00000378727 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.9
THUMPD2-201ENST00000378727 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
THUMPD2-201ENST00000378727 A8MUU9 505 aa9.44□□□□□ -0.9
THUMPD2-201ENST00000378727 CYP4F30PQ9H0H9 118 aa9.43□□□□□ -0.9
THUMPD2-201ENST00000378727 PRR4Q16378 134 aa9.41□□□□□ -0.9
THUMPD2-201ENST00000378727 ABCA13Q86UQ4 5058 aa9.4□□□□□ -0.9
THUMPD2-201ENST00000378727 IGLV7-46A0A075B6I9 117 aa9.4□□□□□ -0.9
THUMPD2-201ENST00000378727 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.9
THUMPD2-201ENST00000378727 SPANXA2-OT1Q8N9U9 137 aa9.4□□□□□ -0.9
THUMPD2-201ENST00000378727 HERC2O95714 4834 aa9.4□□□□□ -0.91
THUMPD2-201ENST00000378727 IGKV2-30P06310 120 aa9.4□□□□□ -0.91
THUMPD2-201ENST00000378727 SERP1Q9Y6X1 66 aa9.38□□□□□ -0.91
THUMPD2-201ENST00000378727 Q75L30 129 aa9.35□□□□□ -0.91
THUMPD2-201ENST00000378727 IGKV2D-30A0A075B6S6 120 aa9.33□□□□□ -0.92
THUMPD2-201ENST00000378727 HRES1P13985 223 aa9.28□□□□□ -0.92
THUMPD2-201ENST00000378727 XP32Q5T750 250 aa9.28□□□□□ -0.92
THUMPD2-201ENST00000378727 C7orf65Q6ZTY9 151 aa9.25□□□□□ -0.93
THUMPD2-201ENST00000378727 RPL37P61927 97 aaKnown RBP9.24□□□□□ -0.93
THUMPD2-201ENST00000378727 J3QL48 77 aa9.22□□□□□ -0.93
THUMPD2-201ENST00000378727 TPRXLQ17RH7 258 aa9.2□□□□□ -0.94
THUMPD2-201ENST00000378727 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
THUMPD2-201ENST00000378727 SPINK7P58062 85 aa9.17□□□□□ -0.94
THUMPD2-201ENST00000378727 DMAC1Q96GE9 116 aa9.16□□□□□ -0.94
THUMPD2-201ENST00000378727 COA5Q86WW8 74 aa9.15□□□□□ -0.94
THUMPD2-201ENST00000378727 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
THUMPD2-201ENST00000378727 LPAP08519 4548 aa9.11□□□□□ -0.95
THUMPD2-201ENST00000378727 C4orf26Q17RF5 130 aa9.09□□□□□ -0.95
THUMPD2-201ENST00000378727 ACYP2P14621 99 aa9.09□□□□□ -0.95
THUMPD2-201ENST00000378727 LRP2P98164 4655 aa9.08□□□□□ -0.96
THUMPD2-201ENST00000378727 PCLOQ9Y6V0 5065 aa9.04□□□□□ -0.96
THUMPD2-201ENST00000378727 MPLKIPQ8TAP9 179 aa9.01□□□□□ -0.97
THUMPD2-201ENST00000378727 KRTAP3-1Q9BYR8 98 aa9.01□□□□□ -0.97
THUMPD2-201ENST00000378727 A8MUN3 132 aa8.98□□□□□ -0.97
THUMPD2-201ENST00000378727 Q1T7F1 81 aa8.95□□□□□ -0.98
THUMPD2-201ENST00000378727 CHKB-CPT1BH3BT56 60 aa8.94□□□□□ -0.98
THUMPD2-201ENST00000378727 COX6B2Q6YFQ2 88 aa8.94□□□□□ -0.98
THUMPD2-201ENST00000378727 HERC1Q15751 4861 aa8.86□□□□□ -0.99
THUMPD2-201ENST00000378727 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
THUMPD2-201ENST00000378727 V9GYY9 64 aa8.85□□□□□ -0.99
THUMPD2-201ENST00000378727 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
THUMPD2-201ENST00000378727 PSPHP1O15172 72 aa8.81□□□□□ -1
THUMPD2-201ENST00000378727 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1.01
THUMPD2-201ENST00000378727 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
THUMPD2-201ENST00000378727 HMCN2Q8NDA2 5059 aa8.76□□□□□ -1.01
THUMPD2-201ENST00000378727 Q5VV11 94 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms