RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ZNF706Q9Y5V0 76 aaPredicted RBP8.41□□□□□ -1.06
MSH5-202ENST00000375740 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.06
MSH5-202ENST00000375740 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
MSH5-202ENST00000375740 LOC101927531A0A1B0GV80 90 aa8.39□□□□□ -1.07
MSH5-202ENST00000375740 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
MSH5-202ENST00000375740 PCOTHQ58A44 107 aa8.38□□□□□ -1.07
MSH5-202ENST00000375740 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
MSH5-202ENST00000375740 A8MWP4 228 aa8.36□□□□□ -1.07
MSH5-202ENST00000375740 H3BPC8 53 aa8.36□□□□□ -1.07
MSH5-202ENST00000375740 MOBPQ13875 183 aa8.36□□□□□ -1.07
MSH5-202ENST00000375740 IGLV7-43P04211 117 aa8.35□□□□□ -1.07
MSH5-202ENST00000375740 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
MSH5-202ENST00000375740 DNAH8Q96JB1 4490 aa8.34□□□□□ -1.07
MSH5-202ENST00000375740 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
MSH5-202ENST00000375740 CDC42SE1Q9NRR8 79 aa8.34□□□□□ -1.07
MSH5-202ENST00000375740 SPINK7P58062 85 aa8.32□□□□□ -1.08
MSH5-202ENST00000375740 Q96NJ1 140 aa8.31□□□□□ -1.08
MSH5-202ENST00000375740 NDUFS5O43920 106 aa8.31□□□□□ -1.08
MSH5-202ENST00000375740 MMP24-AS1A0A0U1RRL7 71 aa8.3□□□□□ -1.08
MSH5-202ENST00000375740 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
MSH5-202ENST00000375740 KRTAP10-1P60331 282 aa8.28□□□□□ -1.08
MSH5-202ENST00000375740 LINC01558Q9Y6Z2 57 aa8.28□□□□□ -1.08
MSH5-202ENST00000375740 FRAS1Q86XX4 4008 aa8.27□□□□□ -1.09
MSH5-202ENST00000375740 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
MSH5-202ENST00000375740 Q6ZSA8 131 aa8.25□□□□□ -1.09
MSH5-202ENST00000375740 DNAH11Q96DT5 4516 aa8.24□□□□□ -1.09
MSH5-202ENST00000375740 DNAH5Q8TE73 4624 aa8.24□□□□□ -1.09
MSH5-202ENST00000375740 HYDINQ4G0P3 5121 aa8.24□□□□□ -1.09
MSH5-202ENST00000375740 HRES1P13985 223 aa8.24□□□□□ -1.09
MSH5-202ENST00000375740 ALMS1Q8TCU4 4167 aa8.23□□□□□ -1.09
MSH5-202ENST00000375740 PKD1P98161 4303 aa8.2□□□□□ -1.1
MSH5-202ENST00000375740 IGHV6-1A0A0B4J1U7 121 aa8.19□□□□□ -1.1
MSH5-202ENST00000375740 PRAC1Q96KF2 57 aa8.19□□□□□ -1.1
MSH5-202ENST00000375740 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
MSH5-202ENST00000375740 A0A1B0GVX0 72 aa8.19□□□□□ -1.1
MSH5-202ENST00000375740 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
MSH5-202ENST00000375740 SSBP3-AS1Q7Z2R9 100 aa8.18□□□□□ -1.1
MSH5-202ENST00000375740 ASB16-AS1Q495Z4 193 aa8.18□□□□□ -1.1
MSH5-202ENST00000375740 PRR26Q8N8Z3 221 aa8.18□□□□□ -1.1
MSH5-202ENST00000375740 ADM2Q7Z4H4 148 aa8.16□□□□□ -1.1
MSH5-202ENST00000375740 SPINK6Q6UWN8 80 aa8.16□□□□□ -1.1
MSH5-202ENST00000375740 A0A087X002 238 aa8.15□□□□□ -1.1
MSH5-202ENST00000375740 LINC00313P59037 77 aa8.15□□□□□ -1.11
MSH5-202ENST00000375740 FAT2Q9NYQ8 4349 aa8.14□□□□□ -1.11
MSH5-202ENST00000375740 NOTCH2NLQ7Z3S9 236 aa8.14□□□□□ -1.11
MSH5-202ENST00000375740 C8orf87E5RJ46 101 aa8.13□□□□□ -1.11
MSH5-202ENST00000375740 KRTAP13-2Q52LG2 175 aa8.13□□□□□ -1.11
MSH5-202ENST00000375740 TP53AIP1Q9HCN2 124 aa8.12□□□□□ -1.11
MSH5-202ENST00000375740 LRP1BQ9NZR2 4599 aa8.11□□□□□ -1.11
MSH5-202ENST00000375740 MRPL34Q9BQ48 92 aaKnown RBP8.1□□□□□ -1.11
MSH5-202ENST00000375740 KRTAP1-4P0C5Y4 121 aa8.08□□□□□ -1.12
MSH5-202ENST00000375740 Q5W150 140 aa8.06□□□□□ -1.12
MSH5-202ENST00000375740 C4orf48Q5BLP8 95 aa8.02□□□□□ -1.13
MSH5-202ENST00000375740 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.13
MSH5-202ENST00000375740 VPS13BQ7Z7G8 4022 aa7.98□□□□□ -1.13
MSH5-202ENST00000375740 SACSQ9NZJ4 4579 aa7.97□□□□□ -1.13
MSH5-202ENST00000375740 TYMSOSQ8TAI1 123 aa7.97□□□□□ -1.13
MSH5-202ENST00000375740 SMR3BP02814 79 aaPredicted RBP7.96□□□□□ -1.14
MSH5-202ENST00000375740 KRTAP13-3Q3SY46 172 aa7.96□□□□□ -1.14
MSH5-202ENST00000375740 A0A1B0GVY2 172 aa7.95□□□□□ -1.14
MSH5-202ENST00000375740 LINC01554Q52M75 96 aa7.95□□□□□ -1.14
MSH5-202ENST00000375740 ACYP2P14621 99 aa7.93□□□□□ -1.14
MSH5-202ENST00000375740 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
MSH5-202ENST00000375740 A0A1B0GU69 56 aa7.9□□□□□ -1.14
MSH5-202ENST00000375740 SPINK1P00995 79 aa7.9□□□□□ -1.15
MSH5-202ENST00000375740 RETNLBQ9BQ08 111 aa7.9□□□□□ -1.15
MSH5-202ENST00000375740 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
MSH5-202ENST00000375740 KRTAP16-1A8MUX0 517 aa7.87□□□□□ -1.15
MSH5-202ENST00000375740 DYNC1H1Q14204 4646 aaKnown RBP7.87□□□□□ -1.15
MSH5-202ENST00000375740 DMAC1Q96GE9 116 aa7.86□□□□□ -1.15
MSH5-202ENST00000375740 H3BS24 57 aa7.86□□□□□ -1.15
MSH5-202ENST00000375740 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
MSH5-202ENST00000375740 FAM229AH3BQW9 127 aa7.84□□□□□ -1.15
MSH5-202ENST00000375740 MIR22HGQ0VDD5 57 aa7.84□□□□□ -1.15
MSH5-202ENST00000375740 KRTAP10-4P60372 401 aaPredicted RBP7.84□□□□□ -1.16
MSH5-202ENST00000375740 CSAG1Q6PB30 78 aa7.83□□□□□ -1.16
MSH5-202ENST00000375740 RPS29P62273 56 aaKnown RBP7.79□□□□□ -1.16
MSH5-202ENST00000375740 RYR2Q92736 4967 aa7.79□□□□□ -1.16
MSH5-202ENST00000375740 UQCR11O14957 56 aa7.79□□□□□ -1.16
MSH5-202ENST00000375740 IGKV2-30P06310 120 aa7.77□□□□□ -1.17
MSH5-202ENST00000375740 APOBP04114 4563 aaKnown RBP7.76□□□□□ -1.17
MSH5-202ENST00000375740 FAT1Q14517 4588 aa7.73□□□□□ -1.17
MSH5-202ENST00000375740 KMT2CQ8NEZ4 4911 aaKnown RBP7.72□□□□□ -1.17
MSH5-202ENST00000375740 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
MSH5-202ENST00000375740 C9orf92A6NGG3 77 aa7.65□□□□□ -1.18
MSH5-202ENST00000375740 PKHD1L1Q86WI1 4243 aa7.61□□□□□ -1.19
MSH5-202ENST00000375740 A8MUU9 505 aa7.58□□□□□ -1.2
MSH5-202ENST00000375740 Q8N1X5 172 aa7.58□□□□□ -1.2
MSH5-202ENST00000375740 C20orf166-AS1Q96NR2 134 aa7.58□□□□□ -1.2
MSH5-202ENST00000375740 Q5VSD8 79 aa7.57□□□□□ -1.2
MSH5-202ENST00000375740 FLG2Q5D862 2391 aaPredicted RBP7.57□□□□□ -1.2
MSH5-202ENST00000375740 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
MSH5-202ENST00000375740 H0YAA0 97 aa7.53□□□□□ -1.2
MSH5-202ENST00000375740 KRTAP17-1Q9BYP8 105 aa7.51□□□□□ -1.21
MSH5-202ENST00000375740 RYR3Q15413 4870 aa7.5□□□□□ -1.21
MSH5-202ENST00000375740 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
MSH5-202ENST00000375740 CRIPTQ9P021 101 aa7.48□□□□□ -1.21
MSH5-202ENST00000375740 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
MSH5-202ENST00000375740 HSPG2P98160 4391 aa7.47□□□□□ -1.21
MSH5-202ENST00000375740 ROMO1P60602 79 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms