RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
CCDC40-203ENST00000374877 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
CCDC40-203ENST00000374877 A0A1B0GVX0 72 aa6.66□□□□□ -1.34
CCDC40-203ENST00000374877 KTN1-AS1Q86SY8 53 aa6.65□□□□□ -1.34
CCDC40-203ENST00000374877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.65□□□□□ -1.34
CCDC40-203ENST00000374877 ANAPC11Q9NYG5 84 aa6.65□□□□□ -1.35
CCDC40-203ENST00000374877 MRPL34Q9BQ48 92 aaKnown RBP6.64□□□□□ -1.35
CCDC40-203ENST00000374877 LINC01558Q9Y6Z2 57 aa6.64□□□□□ -1.35
CCDC40-203ENST00000374877 HRES1P13985 223 aa6.64□□□□□ -1.35
CCDC40-203ENST00000374877 TGP01266 2768 aa6.64□□□□□ -1.35
CCDC40-203ENST00000374877 A0A087X002 238 aa6.64□□□□□ -1.35
CCDC40-203ENST00000374877 NOTCH2NLQ7Z3S9 236 aa6.64□□□□□ -1.35
CCDC40-203ENST00000374877 CDC42SE1Q9NRR8 79 aa6.64□□□□□ -1.35
CCDC40-203ENST00000374877 DNAH2Q9P225 4427 aa6.62□□□□□ -1.35
CCDC40-203ENST00000374877 SPINK6Q6UWN8 80 aa6.62□□□□□ -1.35
CCDC40-203ENST00000374877 SPINK7P58062 85 aa6.6□□□□□ -1.35
CCDC40-203ENST00000374877 SPACA4Q8TDM5 124 aa6.6□□□□□ -1.35
CCDC40-203ENST00000374877 DNAH17Q9UFH2 4485 aa6.6□□□□□ -1.35
CCDC40-203ENST00000374877 LINC00483Q53H64 154 aa6.6□□□□□ -1.35
CCDC40-203ENST00000374877 RTL8CO15255 209 aa6.6□□□□□ -1.35
CCDC40-203ENST00000374877 ZNF706Q9Y5V0 76 aaPredicted RBP6.6□□□□□ -1.35
CCDC40-203ENST00000374877 A6NN06 94 aa6.59□□□□□ -1.35
CCDC40-203ENST00000374877 PLAC8Q9NZF1 115 aa6.59□□□□□ -1.35
CCDC40-203ENST00000374877 PRR26Q8N8Z3 221 aa6.58□□□□□ -1.36
CCDC40-203ENST00000374877 PSORS1C2Q9UIG4 136 aa6.58□□□□□ -1.36
CCDC40-203ENST00000374877 KMT2AQ03164 3969 aa6.57□□□□□ -1.36
CCDC40-203ENST00000374877 RBM12B-AS1Q9P1G2 102 aa6.56□□□□□ -1.36
CCDC40-203ENST00000374877 Q5W150 140 aa6.56□□□□□ -1.36
CCDC40-203ENST00000374877 IGLV5-52A0A0A0MRZ9 124 aa6.56□□□□□ -1.36
CCDC40-203ENST00000374877 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
CCDC40-203ENST00000374877 ZNF861PO60384 105 aa6.53□□□□□ -1.36
CCDC40-203ENST00000374877 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
CCDC40-203ENST00000374877 C7orf65Q6ZTY9 151 aa6.51□□□□□ -1.37
CCDC40-203ENST00000374877 FRAS1Q86XX4 4008 aa6.51□□□□□ -1.37
CCDC40-203ENST00000374877 ACYP2P14621 99 aa6.5□□□□□ -1.37
CCDC40-203ENST00000374877 KRTAP10-2P60368 255 aa6.49□□□□□ -1.37
CCDC40-203ENST00000374877 DNAH11Q96DT5 4516 aa6.49□□□□□ -1.37
CCDC40-203ENST00000374877 RETNLBQ9BQ08 111 aa6.49□□□□□ -1.37
CCDC40-203ENST00000374877 KRTAP13-3Q3SY46 172 aa6.48□□□□□ -1.37
CCDC40-203ENST00000374877 HYDINQ4G0P3 5121 aa6.48□□□□□ -1.37
CCDC40-203ENST00000374877 FAT2Q9NYQ8 4349 aa6.47□□□□□ -1.37
CCDC40-203ENST00000374877 DNAH8Q96JB1 4490 aa6.47□□□□□ -1.37
CCDC40-203ENST00000374877 HECTD4Q9Y4D8 3996 aa6.45□□□□□ -1.38
CCDC40-203ENST00000374877 Q6ZSA8 131 aa6.45□□□□□ -1.38
CCDC40-203ENST00000374877 RYR2Q92736 4967 aa6.43□□□□□ -1.38
CCDC40-203ENST00000374877 A0A1B0GVY2 172 aa6.43□□□□□ -1.38
CCDC40-203ENST00000374877 IGLV7-43P04211 117 aa6.43□□□□□ -1.38
CCDC40-203ENST00000374877 C8orf87E5RJ46 101 aa6.42□□□□□ -1.38
CCDC40-203ENST00000374877 KRTAP10-1P60331 282 aa6.42□□□□□ -1.38
CCDC40-203ENST00000374877 DMAC1Q96GE9 116 aa6.42□□□□□ -1.38
CCDC40-203ENST00000374877 DNAH5Q8TE73 4624 aa6.42□□□□□ -1.38
CCDC40-203ENST00000374877 A0A1B0GU69 56 aa6.42□□□□□ -1.38
CCDC40-203ENST00000374877 LINC00313P59037 77 aa6.42□□□□□ -1.38
CCDC40-203ENST00000374877 PKD1P98161 4303 aa6.4□□□□□ -1.39
CCDC40-203ENST00000374877 FAM229AH3BQW9 127 aa6.4□□□□□ -1.39
CCDC40-203ENST00000374877 PRAC1Q96KF2 57 aa6.39□□□□□ -1.39
CCDC40-203ENST00000374877 SSBP3-AS1Q7Z2R9 100 aa6.38□□□□□ -1.39
CCDC40-203ENST00000374877 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
CCDC40-203ENST00000374877 ADM2Q7Z4H4 148 aa6.35□□□□□ -1.39
CCDC40-203ENST00000374877 IGKV2D-30A0A075B6S6 120 aa6.34□□□□□ -1.39
CCDC40-203ENST00000374877 KMT2CQ8NEZ4 4911 aaKnown RBP6.33□□□□□ -1.4
CCDC40-203ENST00000374877 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
CCDC40-203ENST00000374877 DYNC1H1Q14204 4646 aaKnown RBP6.32□□□□□ -1.4
CCDC40-203ENST00000374877 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
CCDC40-203ENST00000374877 UQCR11O14957 56 aa6.31□□□□□ -1.4
CCDC40-203ENST00000374877 KRTAP13-2Q52LG2 175 aa6.29□□□□□ -1.4
CCDC40-203ENST00000374877 LRP1BQ9NZR2 4599 aa6.29□□□□□ -1.4
CCDC40-203ENST00000374877 PLA2G1BP04054 148 aaKnown RBP6.28□□□□□ -1.4
CCDC40-203ENST00000374877 KRTAP16-1A8MUX0 517 aa6.27□□□□□ -1.41
CCDC40-203ENST00000374877 SPINK1P00995 79 aa6.26□□□□□ -1.41
CCDC40-203ENST00000374877 PKHD1P08F94 4074 aa6.23□□□□□ -1.41
CCDC40-203ENST00000374877 RYR3Q15413 4870 aa6.22□□□□□ -1.41
CCDC40-203ENST00000374877 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
CCDC40-203ENST00000374877 Q8N1X5 172 aa6.21□□□□□ -1.42
CCDC40-203ENST00000374877 LINC01554Q52M75 96 aa6.2□□□□□ -1.42
CCDC40-203ENST00000374877 C4orf48Q5BLP8 95 aa6.2□□□□□ -1.42
CCDC40-203ENST00000374877 KRTAP1-4P0C5Y4 121 aa6.16□□□□□ -1.42
CCDC40-203ENST00000374877 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
CCDC40-203ENST00000374877 KRTAP10-4P60372 401 aaPredicted RBP6.16□□□□□ -1.42
CCDC40-203ENST00000374877 SMR3BP02814 79 aaPredicted RBP6.15□□□□□ -1.42
CCDC40-203ENST00000374877 TYMSOSQ8TAI1 123 aa6.15□□□□□ -1.43
CCDC40-203ENST00000374877 VPS13BQ7Z7G8 4022 aa6.11□□□□□ -1.43
CCDC40-203ENST00000374877 PKHD1L1Q86WI1 4243 aa6.08□□□□□ -1.44
CCDC40-203ENST00000374877 HSPG2P98160 4391 aa6.06□□□□□ -1.44
CCDC40-203ENST00000374877 Q5VSD8 79 aa6.06□□□□□ -1.44
CCDC40-203ENST00000374877 FAT1Q14517 4588 aa6.06□□□□□ -1.44
CCDC40-203ENST00000374877 RYR1P21817 5038 aa6.06□□□□□ -1.44
CCDC40-203ENST00000374877 H0YAA0 97 aa6.05□□□□□ -1.44
CCDC40-203ENST00000374877 LINC00304Q8N9R0 145 aa6.04□□□□□ -1.44
CCDC40-203ENST00000374877 C9orf92A6NGG3 77 aa6.04□□□□□ -1.44
CCDC40-203ENST00000374877 A0A1B0GU33 70 aa6.01□□□□□ -1.45
CCDC40-203ENST00000374877 A8MUU9 505 aa6□□□□□ -1.45
CCDC40-203ENST00000374877 EPPK1P58107 5090 aaKnown RBP5.99□□□□□ -1.45
CCDC40-203ENST00000374877 RPS29P62273 56 aaKnown RBP5.98□□□□□ -1.45
CCDC40-203ENST00000374877 KRTAP17-1Q9BYP8 105 aa5.97□□□□□ -1.45
CCDC40-203ENST00000374877 FLG2Q5D862 2391 aaPredicted RBP5.97□□□□□ -1.45
CCDC40-203ENST00000374877 KRTAP3-1Q9BYR8 98 aa5.96□□□□□ -1.45
CCDC40-203ENST00000374877 H1FX-AS1Q4G0G2 97 aa5.96□□□□□ -1.46
CCDC40-203ENST00000374877 KIAA1109Q2LD37 5005 aa5.94□□□□□ -1.46
CCDC40-203ENST00000374877 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms