RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 A0A087X002 238 aa9.85□□□□□ -0.83
HDAC8-206ENST00000373571 NOTCH2NLQ7Z3S9 236 aa9.85□□□□□ -0.83
HDAC8-206ENST00000373571 SPINK6Q6UWN8 80 aa9.84□□□□□ -0.83
HDAC8-206ENST00000373571 PRO0628Q9UI54 55 aa9.84□□□□□ -0.83
HDAC8-206ENST00000373571 CD164Q04900 197 aa9.81□□□□□ -0.84
HDAC8-206ENST00000373571 PCOTHQ58A44 107 aa9.81□□□□□ -0.84
HDAC8-206ENST00000373571 SSBP3-AS1Q7Z2R9 100 aa9.8□□□□□ -0.84
HDAC8-206ENST00000373571 BRK1Q8WUW1 75 aa9.8□□□□□ -0.84
HDAC8-206ENST00000373571 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
HDAC8-206ENST00000373571 KRTAP10-1P60331 282 aa9.76□□□□□ -0.85
HDAC8-206ENST00000373571 Q6ZSA8 131 aa9.75□□□□□ -0.85
HDAC8-206ENST00000373571 PSPHP1O15172 72 aa9.74□□□□□ -0.85
HDAC8-206ENST00000373571 V9GYY9 64 aa9.73□□□□□ -0.85
HDAC8-206ENST00000373571 PKD1P98161 4303 aa9.73□□□□□ -0.85
HDAC8-206ENST00000373571 COA5Q86WW8 74 aa9.72□□□□□ -0.85
HDAC8-206ENST00000373571 KRTAP13-2Q52LG2 175 aa9.7□□□□□ -0.86
HDAC8-206ENST00000373571 C8orf87E5RJ46 101 aa9.69□□□□□ -0.86
HDAC8-206ENST00000373571 FAT2Q9NYQ8 4349 aa9.69□□□□□ -0.86
HDAC8-206ENST00000373571 Q5W150 140 aa9.68□□□□□ -0.86
HDAC8-206ENST00000373571 Q8N9P0 234 aaPredicted RBP9.68□□□□□ -0.86
HDAC8-206ENST00000373571 HYDINQ4G0P3 5121 aa9.68□□□□□ -0.86
HDAC8-206ENST00000373571 A8MUN3 132 aa9.67□□□□□ -0.86
HDAC8-206ENST00000373571 LRP1BQ9NZR2 4599 aa9.66□□□□□ -0.86
HDAC8-206ENST00000373571 LOC101927531A0A1B0GV80 90 aa9.66□□□□□ -0.86
HDAC8-206ENST00000373571 C1orf195Q5TG92 126 aa9.66□□□□□ -0.86
HDAC8-206ENST00000373571 KRTAP13-3Q3SY46 172 aa9.65□□□□□ -0.86
HDAC8-206ENST00000373571 LIMD2Q9BT23 127 aa9.63□□□□□ -0.87
HDAC8-206ENST00000373571 LINC00313P59037 77 aa9.62□□□□□ -0.87
HDAC8-206ENST00000373571 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
HDAC8-206ENST00000373571 Q5VV11 94 aa9.61□□□□□ -0.87
HDAC8-206ENST00000373571 PRR15LQ9BU68 103 aa9.58□□□□□ -0.88
HDAC8-206ENST00000373571 HRES1P13985 223 aa9.58□□□□□ -0.88
HDAC8-206ENST00000373571 VPS13BQ7Z7G8 4022 aa9.58□□□□□ -0.88
HDAC8-206ENST00000373571 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
HDAC8-206ENST00000373571 CHKB-CPT1BH3BT56 60 aa9.52□□□□□ -0.89
HDAC8-206ENST00000373571 PLA2G1BP04054 148 aaKnown RBP9.52□□□□□ -0.89
HDAC8-206ENST00000373571 RETNLBQ9BQ08 111 aa9.52□□□□□ -0.89
HDAC8-206ENST00000373571 SPAG11AQ6PDA7 123 aa9.51□□□□□ -0.89
HDAC8-206ENST00000373571 KRTAP16-1A8MUX0 517 aa9.5□□□□□ -0.89
HDAC8-206ENST00000373571 C4orf48Q5BLP8 95 aa9.5□□□□□ -0.89
HDAC8-206ENST00000373571 TYMSOSQ8TAI1 123 aa9.5□□□□□ -0.89
HDAC8-206ENST00000373571 Q75L30 129 aa9.48□□□□□ -0.89
HDAC8-206ENST00000373571 LINC01558Q9Y6Z2 57 aa9.48□□□□□ -0.89
HDAC8-206ENST00000373571 KRTAP21-3Q3LHN1 58 aa9.47□□□□□ -0.89
HDAC8-206ENST00000373571 SPINK1P00995 79 aa9.45□□□□□ -0.9
HDAC8-206ENST00000373571 IGKV2-30P06310 120 aa9.45□□□□□ -0.9
HDAC8-206ENST00000373571 ACYP2P14621 99 aa9.44□□□□□ -0.9
HDAC8-206ENST00000373571 A8MU10 97 aa9.43□□□□□ -0.9
HDAC8-206ENST00000373571 PKHD1P08F94 4074 aa9.42□□□□□ -0.9
HDAC8-206ENST00000373571 DMAC1Q96GE9 116 aa9.42□□□□□ -0.9
HDAC8-206ENST00000373571 PRR26Q8N8Z3 221 aa9.41□□□□□ -0.9
HDAC8-206ENST00000373571 A6NED7 52 aa9.4□□□□□ -0.9
HDAC8-206ENST00000373571 SACSQ9NZJ4 4579 aa9.4□□□□□ -0.91
HDAC8-206ENST00000373571 LINC00304Q8N9R0 145 aa9.37□□□□□ -0.91
HDAC8-206ENST00000373571 IGKV2D-30A0A075B6S6 120 aa9.35□□□□□ -0.91
HDAC8-206ENST00000373571 SMR3BP02814 79 aaPredicted RBP9.34□□□□□ -0.91
HDAC8-206ENST00000373571 LCA10Q71F78 164 aa9.34□□□□□ -0.91
HDAC8-206ENST00000373571 RPS29P62273 56 aaKnown RBP9.33□□□□□ -0.92
HDAC8-206ENST00000373571 DYNC1H1Q14204 4646 aaKnown RBP9.3□□□□□ -0.92
HDAC8-206ENST00000373571 CDC42SE1Q9NRR8 79 aa9.29□□□□□ -0.92
HDAC8-206ENST00000373571 A0A1B0GVY2 172 aa9.27□□□□□ -0.93
HDAC8-206ENST00000373571 SPINK7P58062 85 aa9.27□□□□□ -0.93
HDAC8-206ENST00000373571 SPTSSBQ8NFR3 76 aa9.26□□□□□ -0.93
HDAC8-206ENST00000373571 PMAIP1Q13794 54 aa9.25□□□□□ -0.93
HDAC8-206ENST00000373571 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
HDAC8-206ENST00000373571 C7orf65Q6ZTY9 151 aa9.23□□□□□ -0.93
HDAC8-206ENST00000373571 KRTAP10-4P60372 401 aaPredicted RBP9.21□□□□□ -0.94
HDAC8-206ENST00000373571 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.94
HDAC8-206ENST00000373571 PKHD1L1Q86WI1 4243 aa9.19□□□□□ -0.94
HDAC8-206ENST00000373571 FAT1Q14517 4588 aa9.18□□□□□ -0.94
HDAC8-206ENST00000373571 A0A1B0GU69 56 aa9.17□□□□□ -0.94
HDAC8-206ENST00000373571 C9orf92A6NGG3 77 aa9.16□□□□□ -0.94
HDAC8-206ENST00000373571 Q8N1X5 172 aa9.11□□□□□ -0.95
HDAC8-206ENST00000373571 C20orf166-AS1Q96NR2 134 aa9.11□□□□□ -0.95
HDAC8-206ENST00000373571 A8MUU9 505 aa9.11□□□□□ -0.95
HDAC8-206ENST00000373571 A6NN06 94 aa9.1□□□□□ -0.95
HDAC8-206ENST00000373571 RYR2Q92736 4967 aa9.08□□□□□ -0.96
HDAC8-206ENST00000373571 KTN1-AS1Q86SY8 53 aa9.04□□□□□ -0.96
HDAC8-206ENST00000373571 UQCR11O14957 56 aa8.98□□□□□ -0.97
HDAC8-206ENST00000373571 SPATA8Q6RVD6 105 aa8.98□□□□□ -0.97
HDAC8-206ENST00000373571 KMT2CQ8NEZ4 4911 aaKnown RBP8.97□□□□□ -0.97
HDAC8-206ENST00000373571 MIR22HGQ0VDD5 57 aa8.96□□□□□ -0.98
HDAC8-206ENST00000373571 KRTAP3-1Q9BYR8 98 aa8.92□□□□□ -0.98
HDAC8-206ENST00000373571 FLG2Q5D862 2391 aaPredicted RBP8.92□□□□□ -0.98
HDAC8-206ENST00000373571 SEC61GP60059 68 aa8.9□□□□□ -0.98
HDAC8-206ENST00000373571 TNXBP22105 4242 aa8.88□□□□□ -0.99
HDAC8-206ENST00000373571 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
HDAC8-206ENST00000373571 Q5VSD8 79 aa8.86□□□□□ -0.99
HDAC8-206ENST00000373571 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
HDAC8-206ENST00000373571 LRP1Q07954 4544 aaKnown RBP8.85□□□□□ -0.99
HDAC8-206ENST00000373571 HSPG2P98160 4391 aa8.82□□□□□ -1
HDAC8-206ENST00000373571 COX6B2Q6YFQ2 88 aa8.8□□□□□ -1
HDAC8-206ENST00000373571 RBM12B-AS1Q9P1G2 102 aa8.77□□□□□ -1.01
HDAC8-206ENST00000373571 RPL37P61927 97 aaKnown RBP8.72□□□□□ -1.01
HDAC8-206ENST00000373571 H0YAA0 97 aa8.7□□□□□ -1.02
HDAC8-206ENST00000373571 XP32Q5T750 250 aa8.69□□□□□ -1.02
HDAC8-206ENST00000373571 RYR3Q15413 4870 aa8.69□□□□□ -1.02
HDAC8-206ENST00000373571 RYR1P21817 5038 aa8.68□□□□□ -1.02
HDAC8-206ENST00000373571 A0A1B0GU33 70 aa8.68□□□□□ -1.02
HDAC8-206ENST00000373571 KRTAP17-1Q9BYP8 105 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms