RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 SPANXA2-OT1Q8N9U9 137 aa12.1□□□□□ -0.47
VEGFA-204ENST00000372064 LRP1BQ9NZR2 4599 aa12.09□□□□□ -0.47
VEGFA-204ENST00000372064 SSBP3-AS1Q7Z2R9 100 aa12.09□□□□□ -0.47
VEGFA-204ENST00000372064 PRR4Q16378 134 aa12.07□□□□□ -0.48
VEGFA-204ENST00000372064 A0A087X002 238 aa12.05□□□□□ -0.48
VEGFA-204ENST00000372064 SPINK6Q6UWN8 80 aa12.05□□□□□ -0.48
VEGFA-204ENST00000372064 NOTCH2NLQ7Z3S9 236 aa12.05□□□□□ -0.48
VEGFA-204ENST00000372064 MRPL34Q9BQ48 92 aaKnown RBP12.05□□□□□ -0.48
VEGFA-204ENST00000372064 MPLKIPQ8TAP9 179 aa12.02□□□□□ -0.49
VEGFA-204ENST00000372064 NDUFS5O43920 106 aa11.99□□□□□ -0.49
VEGFA-204ENST00000372064 KRTAP13-2Q52LG2 175 aa11.98□□□□□ -0.49
VEGFA-204ENST00000372064 Q1T7F1 81 aa11.94□□□□□ -0.5
VEGFA-204ENST00000372064 IGLV7-46A0A075B6I9 117 aa11.93□□□□□ -0.5
VEGFA-204ENST00000372064 LINC00336Q6ZUF6 198 aa11.93□□□□□ -0.5
VEGFA-204ENST00000372064 VPS13BQ7Z7G8 4022 aa11.92□□□□□ -0.5
VEGFA-204ENST00000372064 KRTAP1-4P0C5Y4 121 aa11.9□□□□□ -0.5
VEGFA-204ENST00000372064 C8orf87E5RJ46 101 aa11.9□□□□□ -0.5
VEGFA-204ENST00000372064 SACSQ9NZJ4 4579 aa11.9□□□□□ -0.5
VEGFA-204ENST00000372064 PCOTHQ58A44 107 aa11.87□□□□□ -0.51
VEGFA-204ENST00000372064 KRTAP13-3Q3SY46 172 aa11.86□□□□□ -0.51
VEGFA-204ENST00000372064 PKHD1P08F94 4074 aa11.85□□□□□ -0.51
VEGFA-204ENST00000372064 C1orf195Q5TG92 126 aa11.84□□□□□ -0.51
VEGFA-204ENST00000372064 Q5W150 140 aa11.83□□□□□ -0.52
VEGFA-204ENST00000372064 LOC101927531A0A1B0GV80 90 aa11.81□□□□□ -0.52
VEGFA-204ENST00000372064 PRO0628Q9UI54 55 aa11.8□□□□□ -0.52
VEGFA-204ENST00000372064 LINC00313P59037 77 aa11.79□□□□□ -0.52
VEGFA-204ENST00000372064 PLA2G1BP04054 148 aaKnown RBP11.78□□□□□ -0.52
VEGFA-204ENST00000372064 COA5Q86WW8 74 aa11.78□□□□□ -0.52
VEGFA-204ENST00000372064 V9GYY9 64 aa11.77□□□□□ -0.52
VEGFA-204ENST00000372064 Q8N9P0 234 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-204ENST00000372064 LIMD2Q9BT23 127 aa11.77□□□□□ -0.53
VEGFA-204ENST00000372064 TYMSOSQ8TAI1 123 aa11.73□□□□□ -0.53
VEGFA-204ENST00000372064 DYNC1H1Q14204 4646 aaKnown RBP11.72□□□□□ -0.53
VEGFA-204ENST00000372064 BRK1Q8WUW1 75 aa11.72□□□□□ -0.53
VEGFA-204ENST00000372064 KRTAP16-1A8MUX0 517 aa11.7□□□□□ -0.54
VEGFA-204ENST00000372064 PSPHP1O15172 72 aa11.7□□□□□ -0.54
VEGFA-204ENST00000372064 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
VEGFA-204ENST00000372064 SMR3BP02814 79 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-204ENST00000372064 FAM229AH3BQW9 127 aa11.68□□□□□ -0.54
VEGFA-204ENST00000372064 SPINK1P00995 79 aa11.66□□□□□ -0.54
VEGFA-204ENST00000372064 A8MUN3 132 aa11.65□□□□□ -0.54
VEGFA-204ENST00000372064 HRES1P13985 223 aa11.65□□□□□ -0.54
VEGFA-204ENST00000372064 A0A1B0GVY2 172 aa11.64□□□□□ -0.55
VEGFA-204ENST00000372064 PRR26Q8N8Z3 221 aa11.64□□□□□ -0.55
VEGFA-204ENST00000372064 RETNLBQ9BQ08 111 aa11.63□□□□□ -0.55
VEGFA-204ENST00000372064 Q5VV11 94 aa11.61□□□□□ -0.55
VEGFA-204ENST00000372064 RPS29P62273 56 aaKnown RBP11.58□□□□□ -0.56
VEGFA-204ENST00000372064 FAT1Q14517 4588 aa11.58□□□□□ -0.56
VEGFA-204ENST00000372064 IGKV2-30P06310 120 aa11.57□□□□□ -0.56
VEGFA-204ENST00000372064 APOBP04114 4563 aaKnown RBP11.56□□□□□ -0.56
VEGFA-204ENST00000372064 LINC00304Q8N9R0 145 aa11.56□□□□□ -0.56
VEGFA-204ENST00000372064 PRR15LQ9BU68 103 aa11.54□□□□□ -0.56
VEGFA-204ENST00000372064 RYR2Q92736 4967 aa11.53□□□□□ -0.56
VEGFA-204ENST00000372064 SPAG11AQ6PDA7 123 aa11.52□□□□□ -0.57
VEGFA-204ENST00000372064 DMAC1Q96GE9 116 aa11.51□□□□□ -0.57
VEGFA-204ENST00000372064 LINC01558Q9Y6Z2 57 aa11.51□□□□□ -0.57
VEGFA-204ENST00000372064 KRTAP10-4P60372 401 aaPredicted RBP11.5□□□□□ -0.57
VEGFA-204ENST00000372064 ACYP2P14621 99 aa11.49□□□□□ -0.57
VEGFA-204ENST00000372064 Q75L30 129 aa11.48□□□□□ -0.57
VEGFA-204ENST00000372064 PKHD1L1Q86WI1 4243 aa11.48□□□□□ -0.57
VEGFA-204ENST00000372064 SEC61GP60059 68 aa11.47□□□□□ -0.57
VEGFA-204ENST00000372064 KMT2CQ8NEZ4 4911 aaKnown RBP11.46□□□□□ -0.58
VEGFA-204ENST00000372064 CHKB-CPT1BH3BT56 60 aa11.45□□□□□ -0.58
VEGFA-204ENST00000372064 IGKV2D-30A0A075B6S6 120 aa11.39□□□□□ -0.59
VEGFA-204ENST00000372064 A8MU10 97 aa11.33□□□□□ -0.6
VEGFA-204ENST00000372064 A6NED7 52 aa11.3□□□□□ -0.6
VEGFA-204ENST00000372064 C9orf92A6NGG3 77 aa11.29□□□□□ -0.6
VEGFA-204ENST00000372064 LCA10Q71F78 164 aa11.28□□□□□ -0.6
VEGFA-204ENST00000372064 C7orf65Q6ZTY9 151 aa11.26□□□□□ -0.61
VEGFA-204ENST00000372064 C20orf166-AS1Q96NR2 134 aa11.25□□□□□ -0.61
VEGFA-204ENST00000372064 A8MUU9 505 aa11.24□□□□□ -0.61
VEGFA-204ENST00000372064 CDC42SE1Q9NRR8 79 aa11.22□□□□□ -0.61
VEGFA-204ENST00000372064 SPINK7P58062 85 aa11.2□□□□□ -0.62
VEGFA-204ENST00000372064 FLG2Q5D862 2391 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-204ENST00000372064 ATP11AUNQ6ZP68 121 aa11.15□□□□□ -0.63
VEGFA-204ENST00000372064 LRP1Q07954 4544 aaKnown RBP11.13□□□□□ -0.63
VEGFA-204ENST00000372064 HSPG2P98160 4391 aa11.13□□□□□ -0.63
VEGFA-204ENST00000372064 Q8N1X5 172 aa11.12□□□□□ -0.63
VEGFA-204ENST00000372064 RYR3Q15413 4870 aa11.1□□□□□ -0.63
VEGFA-204ENST00000372064 Q5VSD8 79 aa11.1□□□□□ -0.63
VEGFA-204ENST00000372064 A0A1B0GU69 56 aa11.09□□□□□ -0.63
VEGFA-204ENST00000372064 TNXBP22105 4242 aa11.09□□□□□ -0.63
VEGFA-204ENST00000372064 PMAIP1Q13794 54 aa11.08□□□□□ -0.64
VEGFA-204ENST00000372064 SPTSSBQ8NFR3 76 aa11.07□□□□□ -0.64
VEGFA-204ENST00000372064 KRTAP10-8P60410 259 aa11.05□□□□□ -0.64
VEGFA-204ENST00000372064 FAT3Q8TDW7 4589 aa11.04□□□□□ -0.64
VEGFA-204ENST00000372064 RYR1P21817 5038 aa11.01□□□□□ -0.65
VEGFA-204ENST00000372064 KRTAP17-1Q9BYP8 105 aa10.99□□□□□ -0.65
VEGFA-204ENST00000372064 A6NN06 94 aa10.96□□□□□ -0.65
VEGFA-204ENST00000372064 KRTAP3-1Q9BYR8 98 aa10.95□□□□□ -0.66
VEGFA-204ENST00000372064 DMBT1Q9UGM3 2413 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-204ENST00000372064 SPATA8Q6RVD6 105 aa10.91□□□□□ -0.66
VEGFA-204ENST00000372064 KIAA1109Q2LD37 5005 aa10.89□□□□□ -0.67
VEGFA-204ENST00000372064 UQCR11O14957 56 aa10.88□□□□□ -0.67
VEGFA-204ENST00000372064 KTN1-AS1Q86SY8 53 aa10.83□□□□□ -0.68
VEGFA-204ENST00000372064 MIR22HGQ0VDD5 57 aa10.82□□□□□ -0.68
VEGFA-204ENST00000372064 COX6B2Q6YFQ2 88 aa10.81□□□□□ -0.68
VEGFA-204ENST00000372064 MYCBP2O75592 4640 aa10.8□□□□□ -0.68
VEGFA-204ENST00000372064 MT1HL1P0DM35 61 aa10.78□□□□□ -0.68
VEGFA-204ENST00000372064 RPL37P61927 97 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms