RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 LY6G6CO95867 125 aa9.36□□□□□ -0.91
PHACTR3-204ENST00000371015 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
PHACTR3-204ENST00000371015 TRRAPQ9Y4A5 3859 aa9.34□□□□□ -0.91
PHACTR3-204ENST00000371015 ATRQ13535 2644 aa9.34□□□□□ -0.91
PHACTR3-204ENST00000371015 COL6A5A8TX70 2615 aa9.32□□□□□ -0.92
PHACTR3-204ENST00000371015 IGKV2-30P06310 120 aa9.32□□□□□ -0.92
PHACTR3-204ENST00000371015 FBN3Q75N90 2809 aa9.31□□□□□ -0.92
PHACTR3-204ENST00000371015 CASC10Q5T4H9 136 aa9.31□□□□□ -0.92
PHACTR3-204ENST00000371015 KRTAP16-1A8MUX0 517 aa9.29□□□□□ -0.92
PHACTR3-204ENST00000371015 CMYA5Q8N3K9 4069 aa9.28□□□□□ -0.92
PHACTR3-204ENST00000371015 PKD1L1Q8TDX9 2849 aa9.27□□□□□ -0.92
PHACTR3-204ENST00000371015 DNHD1Q96M86 4753 aa9.26□□□□□ -0.93
PHACTR3-204ENST00000371015 NUPR2A6NF83 97 aa9.25□□□□□ -0.93
PHACTR3-204ENST00000371015 DNAH3Q8TD57 4116 aa9.25□□□□□ -0.93
PHACTR3-204ENST00000371015 IGLV9-49A0A0B4J1Y8 123 aa9.24□□□□□ -0.93
PHACTR3-204ENST00000371015 KRTAP13-1Q8IUC0 172 aa9.24□□□□□ -0.93
PHACTR3-204ENST00000371015 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
PHACTR3-204ENST00000371015 K7ERS5 55 aa9.22□□□□□ -0.93
PHACTR3-204ENST00000371015 CHTF8P0CG12 524 aa9.22□□□□□ -0.93
PHACTR3-204ENST00000371015 PANO1I0J062 215 aa9.21□□□□□ -0.93
PHACTR3-204ENST00000371015 H0YAA0 97 aa9.21□□□□□ -0.94
PHACTR3-204ENST00000371015 KRTAP11-1Q8IUC1 163 aa9.21□□□□□ -0.94
PHACTR3-204ENST00000371015 TENM3Q9P273 2699 aa9.19□□□□□ -0.94
PHACTR3-204ENST00000371015 IGKV2D-30A0A075B6S6 120 aa9.18□□□□□ -0.94
PHACTR3-204ENST00000371015 Q6ZSA8 131 aa9.18□□□□□ -0.94
PHACTR3-204ENST00000371015 WWC2-AS2Q96NR7 200 aa9.18□□□□□ -0.94
PHACTR3-204ENST00000371015 DNAH1Q9P2D7 4330 aa9.16□□□□□ -0.94
PHACTR3-204ENST00000371015 STAB1Q9NY15 2570 aa9.16□□□□□ -0.94
PHACTR3-204ENST00000371015 SPINT4Q6UDR6 99 aa9.15□□□□□ -0.94
PHACTR3-204ENST00000371015 ANAPC11Q9NYG5 84 aa9.14□□□□□ -0.95
PHACTR3-204ENST00000371015 NDUFAF8A1L188 74 aa9.12□□□□□ -0.95
PHACTR3-204ENST00000371015 SSBP3-AS1Q7Z2R9 100 aa9.12□□□□□ -0.95
PHACTR3-204ENST00000371015 A0A087WTM6 91 aa9.11□□□□□ -0.95
PHACTR3-204ENST00000371015 C14orf177Q52M58 125 aa9.11□□□□□ -0.95
PHACTR3-204ENST00000371015 A0A1B0GU33 70 aa9.1□□□□□ -0.95
PHACTR3-204ENST00000371015 SPINK6Q6UWN8 80 aa9.07□□□□□ -0.96
PHACTR3-204ENST00000371015 PSORS1C2Q9UIG4 136 aa9.07□□□□□ -0.96
PHACTR3-204ENST00000371015 KRTAP15-1Q3LI76 137 aa9.05□□□□□ -0.96
PHACTR3-204ENST00000371015 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
PHACTR3-204ENST00000371015 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
PHACTR3-204ENST00000371015 SRRM2Q9UQ35 2752 aaKnown RBP9□□□□□ -0.97
PHACTR3-204ENST00000371015 UBE2DNLQ8IWF7 75 aa8.99□□□□□ -0.97
PHACTR3-204ENST00000371015 SPINK1P00995 79 aa8.97□□□□□ -0.97
PHACTR3-204ENST00000371015 CRIPTQ9P021 101 aa8.97□□□□□ -0.97
PHACTR3-204ENST00000371015 HUWE1Q7Z6Z7 4374 aaKnown RBP8.94□□□□□ -0.98
PHACTR3-204ENST00000371015 DNAH10Q8IVF4 4471 aa8.92□□□□□ -0.98
PHACTR3-204ENST00000371015 MGAM2Q2M2H8 2515 aa8.92□□□□□ -0.98
PHACTR3-204ENST00000371015 APLNQ9ULZ1 77 aa8.91□□□□□ -0.98
PHACTR3-204ENST00000371015 NOTCH1P46531 2555 aa8.91□□□□□ -0.98
PHACTR3-204ENST00000371015 MEGF8Q7Z7M0 2845 aa8.89□□□□□ -0.99
PHACTR3-204ENST00000371015 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
PHACTR3-204ENST00000371015 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.88□□□□□ -0.99
PHACTR3-204ENST00000371015 DNAH9Q9NYC9 4486 aa8.87□□□□□ -0.99
PHACTR3-204ENST00000371015 LUZP6Q538Z0 58 aa8.86□□□□□ -0.99
PHACTR3-204ENST00000371015 TYMSOSQ8TAI1 123 aa8.86□□□□□ -0.99
PHACTR3-204ENST00000371015 NBEAL1Q6ZS30 2694 aa8.85□□□□□ -0.99
PHACTR3-204ENST00000371015 PRKDCP78527 4128 aaKnown RBP8.84□□□□□ -0.99
PHACTR3-204ENST00000371015 NBDYA0A0U1RRE5 68 aa8.83□□□□□ -1
PHACTR3-204ENST00000371015 TPRXLQ17RH7 258 aa8.82□□□□□ -1
PHACTR3-204ENST00000371015 SPACA4Q8TDM5 124 aa8.82□□□□□ -1
PHACTR3-204ENST00000371015 CIRBP-AS1Q8TBR5 109 aa8.81□□□□□ -1
PHACTR3-204ENST00000371015 LYSTQ99698 3801 aa8.81□□□□□ -1
PHACTR3-204ENST00000371015 COX6B2Q6YFQ2 88 aa8.8□□□□□ -1
PHACTR3-204ENST00000371015 Q6ZRN7 208 aaPredicted RBP8.79□□□□□ -1
PHACTR3-204ENST00000371015 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
PHACTR3-204ENST00000371015 Q8N1X5 172 aa8.77□□□□□ -1.01
PHACTR3-204ENST00000371015 DNAH7Q8WXX0 4024 aa8.77□□□□□ -1.01
PHACTR3-204ENST00000371015 DYNC2H1Q8NCM8 4307 aaKnown RBP8.76□□□□□ -1.01
PHACTR3-204ENST00000371015 STAB2Q8WWQ8 2551 aa8.72□□□□□ -1.01
PHACTR3-204ENST00000371015 DNAH6Q9C0G6 4158 aa8.72□□□□□ -1.01
PHACTR3-204ENST00000371015 CSMD3Q7Z407 3707 aa8.7□□□□□ -1.02
PHACTR3-204ENST00000371015 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
PHACTR3-204ENST00000371015 COL7A1Q02388 2944 aa8.66□□□□□ -1.02
PHACTR3-204ENST00000371015 PLECQ15149 4684 aaKnown RBP8.61□□□□□ -1.03
PHACTR3-204ENST00000371015 C10orf95Q9H7T3 257 aa8.55□□□□□ -1.04
PHACTR3-204ENST00000371015 DNAH8Q96JB1 4490 aa8.53□□□□□ -1.04
PHACTR3-204ENST00000371015 HECTD4Q9Y4D8 3996 aa8.51□□□□□ -1.05
PHACTR3-204ENST00000371015 VPS13DQ5THJ4 4388 aa8.5□□□□□ -1.05
PHACTR3-204ENST00000371015 FRAS1Q86XX4 4008 aa8.48□□□□□ -1.05
PHACTR3-204ENST00000371015 KRTAP3-1Q9BYR8 98 aa8.48□□□□□ -1.05
PHACTR3-204ENST00000371015 DNAH17Q9UFH2 4485 aa8.44□□□□□ -1.06
PHACTR3-204ENST00000371015 STARD9Q9P2P6 4700 aa8.43□□□□□ -1.06
PHACTR3-204ENST00000371015 TGP01266 2768 aa8.41□□□□□ -1.06
PHACTR3-204ENST00000371015 KRTAP13-2Q52LG2 175 aa8.37□□□□□ -1.07
PHACTR3-204ENST00000371015 RYR2Q92736 4967 aa8.37□□□□□ -1.07
PHACTR3-204ENST00000371015 DNAH2Q9P225 4427 aa8.37□□□□□ -1.07
PHACTR3-204ENST00000371015 XP32Q5T750 250 aa8.36□□□□□ -1.07
PHACTR3-204ENST00000371015 S4R3F8 94 aa8.36□□□□□ -1.07
PHACTR3-204ENST00000371015 SACSQ9NZJ4 4579 aa8.35□□□□□ -1.07
PHACTR3-204ENST00000371015 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
PHACTR3-204ENST00000371015 A0A0D9SG42 100 aa8.35□□□□□ -1.07
PHACTR3-204ENST00000371015 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
PHACTR3-204ENST00000371015 KMT2AQ03164 3969 aa8.31□□□□□ -1.08
PHACTR3-204ENST00000371015 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
PHACTR3-204ENST00000371015 KRTAP3-2Q9BYR7 98 aa8.26□□□□□ -1.09
PHACTR3-204ENST00000371015 KRTAP10-2P60368 255 aa8.25□□□□□ -1.09
PHACTR3-204ENST00000371015 DNAH11Q96DT5 4516 aa8.24□□□□□ -1.09
PHACTR3-204ENST00000371015 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
PHACTR3-204ENST00000371015 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
PHACTR3-204ENST00000371015 KRTAP1-4P0C5Y4 121 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms