RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 DNHD1Q96M86 4753 aa10.47□□□□□ -0.73
CHUK-201ENST00000370397 A0A1B0GVX0 72 aa10.46□□□□□ -0.73
CHUK-201ENST00000370397 WWC2-AS2Q96NR7 200 aa10.45□□□□□ -0.74
CHUK-201ENST00000370397 SPACA4Q8TDM5 124 aa10.44□□□□□ -0.74
CHUK-201ENST00000370397 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.44□□□□□ -0.74
CHUK-201ENST00000370397 IGLV9-49A0A0B4J1Y8 123 aa10.43□□□□□ -0.74
CHUK-201ENST00000370397 SPAG11AQ6PDA7 123 aa10.43□□□□□ -0.74
CHUK-201ENST00000370397 A6NED7 52 aa10.42□□□□□ -0.74
CHUK-201ENST00000370397 SPINK7P58062 85 aa10.4□□□□□ -0.75
CHUK-201ENST00000370397 MRPL34Q9BQ48 92 aaKnown RBP10.4□□□□□ -0.75
CHUK-201ENST00000370397 IGHV6-1A0A0B4J1U7 121 aa10.38□□□□□ -0.75
CHUK-201ENST00000370397 Q5W150 140 aa10.38□□□□□ -0.75
CHUK-201ENST00000370397 SPTSSBQ8NFR3 76 aa10.38□□□□□ -0.75
CHUK-201ENST00000370397 DNAH6Q9C0G6 4158 aa10.36□□□□□ -0.75
CHUK-201ENST00000370397 MGAM2Q2M2H8 2515 aa10.36□□□□□ -0.75
CHUK-201ENST00000370397 DNAH11Q96DT5 4516 aa10.35□□□□□ -0.75
CHUK-201ENST00000370397 RBM12B-AS1Q9P1G2 102 aa10.34□□□□□ -0.75
CHUK-201ENST00000370397 NBDYA0A0U1RRE5 68 aa10.32□□□□□ -0.76
CHUK-201ENST00000370397 UBE2DNLQ8IWF7 75 aa10.32□□□□□ -0.76
CHUK-201ENST00000370397 ANAPC11Q9NYG5 84 aa10.32□□□□□ -0.76
CHUK-201ENST00000370397 IGLV5-52A0A0A0MRZ9 124 aa10.3□□□□□ -0.76
CHUK-201ENST00000370397 PSORS1C2Q9UIG4 136 aa10.29□□□□□ -0.76
CHUK-201ENST00000370397 NDUFS5O43920 106 aa10.29□□□□□ -0.76
CHUK-201ENST00000370397 DNAH5Q8TE73 4624 aa10.29□□□□□ -0.76
CHUK-201ENST00000370397 PRR26Q8N8Z3 221 aa10.26□□□□□ -0.77
CHUK-201ENST00000370397 ZNF706Q9Y5V0 76 aaPredicted RBP10.24□□□□□ -0.77
CHUK-201ENST00000370397 C7orf65Q6ZTY9 151 aa10.23□□□□□ -0.77
CHUK-201ENST00000370397 MEGF8Q7Z7M0 2845 aa10.23□□□□□ -0.77
CHUK-201ENST00000370397 ZNF861PO60384 105 aa10.22□□□□□ -0.77
CHUK-201ENST00000370397 A0A087WTM6 91 aa10.19□□□□□ -0.78
CHUK-201ENST00000370397 DMAC1Q96GE9 116 aa10.18□□□□□ -0.78
CHUK-201ENST00000370397 CDK2AP2O75956 126 aa10.16□□□□□ -0.78
CHUK-201ENST00000370397 PKD1P98161 4303 aa10.13□□□□□ -0.79
CHUK-201ENST00000370397 RTL8CO15255 209 aa10.12□□□□□ -0.79
CHUK-201ENST00000370397 ACYP2P14621 99 aa10.11□□□□□ -0.79
CHUK-201ENST00000370397 LRP1BQ9NZR2 4599 aa10.11□□□□□ -0.79
CHUK-201ENST00000370397 SPINK6Q6UWN8 80 aa10.09□□□□□ -0.79
CHUK-201ENST00000370397 KRTAP16-1A8MUX0 517 aa10.06□□□□□ -0.8
CHUK-201ENST00000370397 C8orf87E5RJ46 101 aa10.06□□□□□ -0.8
CHUK-201ENST00000370397 IGLV7-43P04211 117 aa10.06□□□□□ -0.8
CHUK-201ENST00000370397 NUPR2A6NF83 97 aa10.05□□□□□ -0.8
CHUK-201ENST00000370397 LINC00313P59037 77 aa10.04□□□□□ -0.8
CHUK-201ENST00000370397 IGKV2-30P06310 120 aa10.04□□□□□ -0.8
CHUK-201ENST00000370397 VPS13BQ7Z7G8 4022 aa10.03□□□□□ -0.8
CHUK-201ENST00000370397 SPATA8Q6RVD6 105 aa10.02□□□□□ -0.8
CHUK-201ENST00000370397 CIRBP-AS1Q8TBR5 109 aa10.02□□□□□ -0.81
CHUK-201ENST00000370397 FAT2Q9NYQ8 4349 aa10.02□□□□□ -0.81
CHUK-201ENST00000370397 TGP01266 2768 aa10□□□□□ -0.81
CHUK-201ENST00000370397 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
CHUK-201ENST00000370397 ADM2Q7Z4H4 148 aa9.99□□□□□ -0.81
CHUK-201ENST00000370397 SSBP3-AS1Q7Z2R9 100 aa9.98□□□□□ -0.81
CHUK-201ENST00000370397 FAM229AH3BQW9 127 aa9.97□□□□□ -0.81
CHUK-201ENST00000370397 KRTAP13-2Q52LG2 175 aa9.97□□□□□ -0.81
CHUK-201ENST00000370397 PRAC1Q96KF2 57 aa9.96□□□□□ -0.81
CHUK-201ENST00000370397 A0A1B0GU69 56 aa9.93□□□□□ -0.82
CHUK-201ENST00000370397 RETNLBQ9BQ08 111 aa9.91□□□□□ -0.82
CHUK-201ENST00000370397 HYDINQ4G0P3 5121 aa9.89□□□□□ -0.83
CHUK-201ENST00000370397 MIR22HGQ0VDD5 57 aa9.83□□□□□ -0.84
CHUK-201ENST00000370397 KRTAP1-4P0C5Y4 121 aa9.82□□□□□ -0.84
CHUK-201ENST00000370397 UQCR11O14957 56 aa9.81□□□□□ -0.84
CHUK-201ENST00000370397 IGKV2D-30A0A075B6S6 120 aa9.8□□□□□ -0.84
CHUK-201ENST00000370397 SACSQ9NZJ4 4579 aa9.79□□□□□ -0.84
CHUK-201ENST00000370397 KRTAP10-2P60368 255 aa9.78□□□□□ -0.84
CHUK-201ENST00000370397 Q6ZSA8 131 aa9.76□□□□□ -0.85
CHUK-201ENST00000370397 C1orf134Q5TEV5 83 aa9.74□□□□□ -0.85
CHUK-201ENST00000370397 PKHD1L1Q86WI1 4243 aa9.74□□□□□ -0.85
CHUK-201ENST00000370397 LINC01554Q52M75 96 aa9.71□□□□□ -0.85
CHUK-201ENST00000370397 PKHD1P08F94 4074 aa9.71□□□□□ -0.86
CHUK-201ENST00000370397 KRTAP10-1P60331 282 aa9.64□□□□□ -0.87
CHUK-201ENST00000370397 CSAG1Q6PB30 78 aa9.61□□□□□ -0.87
CHUK-201ENST00000370397 H0YAA0 97 aa9.61□□□□□ -0.87
CHUK-201ENST00000370397 Q8N1X5 172 aa9.59□□□□□ -0.87
CHUK-201ENST00000370397 LY6G6CO95867 125 aa9.58□□□□□ -0.88
CHUK-201ENST00000370397 APOBP04114 4563 aaKnown RBP9.57□□□□□ -0.88
CHUK-201ENST00000370397 KRTAP3-1Q9BYR8 98 aa9.56□□□□□ -0.88
CHUK-201ENST00000370397 A8MUU9 505 aa9.55□□□□□ -0.88
CHUK-201ENST00000370397 TYMSOSQ8TAI1 123 aa9.54□□□□□ -0.88
CHUK-201ENST00000370397 SPINK1P00995 79 aa9.53□□□□□ -0.88
CHUK-201ENST00000370397 RPS29P62273 56 aaKnown RBP9.46□□□□□ -0.89
CHUK-201ENST00000370397 LINC00304Q8N9R0 145 aa9.45□□□□□ -0.9
CHUK-201ENST00000370397 C20orf166-AS1Q96NR2 134 aa9.42□□□□□ -0.9
CHUK-201ENST00000370397 DYNC1H1Q14204 4646 aaKnown RBP9.41□□□□□ -0.9
CHUK-201ENST00000370397 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
CHUK-201ENST00000370397 FAT1Q14517 4588 aa9.39□□□□□ -0.91
CHUK-201ENST00000370397 RYR2Q92736 4967 aa9.38□□□□□ -0.91
CHUK-201ENST00000370397 KRTAP25-1Q3LHN0 102 aa9.35□□□□□ -0.91
CHUK-201ENST00000370397 H1FX-AS1Q4G0G2 97 aa9.35□□□□□ -0.91
CHUK-201ENST00000370397 KMT2CQ8NEZ4 4911 aaKnown RBP9.34□□□□□ -0.91
CHUK-201ENST00000370397 A0A1B0GU33 70 aa9.34□□□□□ -0.91
CHUK-201ENST00000370397 TNXBP22105 4242 aa9.28□□□□□ -0.92
CHUK-201ENST00000370397 FAT3Q8TDW7 4589 aa9.27□□□□□ -0.93
CHUK-201ENST00000370397 C9orf92A6NGG3 77 aa9.26□□□□□ -0.93
CHUK-201ENST00000370397 HSPG2P98160 4391 aa9.26□□□□□ -0.93
CHUK-201ENST00000370397 KRTAP10-4P60372 401 aaPredicted RBP9.25□□□□□ -0.93
CHUK-201ENST00000370397 A0A1B0GVY2 172 aa9.24□□□□□ -0.93
CHUK-201ENST00000370397 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.93
CHUK-201ENST00000370397 LRP1Q07954 4544 aaKnown RBP9.2□□□□□ -0.94
CHUK-201ENST00000370397 H3BS24 57 aa9.2□□□□□ -0.94
CHUK-201ENST00000370397 RYR3Q15413 4870 aa9.18□□□□□ -0.94
CHUK-201ENST00000370397 ROMO1P60602 79 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms