RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 C8orf87E5RJ46 101 aa6.34□□□□□ -1.4
LYSMD1-201ENST00000368908 CHTF8P0CG12 524 aa6.34□□□□□ -1.4
LYSMD1-201ENST00000368908 LINC00483Q53H64 154 aa6.33□□□□□ -1.4
LYSMD1-201ENST00000368908 KRTAP1-5Q9BYS1 174 aa6.33□□□□□ -1.4
LYSMD1-201ENST00000368908 CDK2AP2O75956 126 aa6.32□□□□□ -1.4
LYSMD1-201ENST00000368908 IGHV6-1A0A0B4J1U7 121 aa6.32□□□□□ -1.4
LYSMD1-201ENST00000368908 HYDINQ4G0P3 5121 aa6.3□□□□□ -1.4
LYSMD1-201ENST00000368908 IGLV9-49A0A0B4J1Y8 123 aa6.29□□□□□ -1.4
LYSMD1-201ENST00000368908 NUPR2A6NF83 97 aa6.29□□□□□ -1.4
LYSMD1-201ENST00000368908 KRTAP13-3Q3SY46 172 aa6.29□□□□□ -1.4
LYSMD1-201ENST00000368908 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
LYSMD1-201ENST00000368908 A0A087X002 238 aa6.28□□□□□ -1.4
LYSMD1-201ENST00000368908 ACYP2P14621 99 aa6.28□□□□□ -1.4
LYSMD1-201ENST00000368908 PRR26Q8N8Z3 221 aa6.26□□□□□ -1.41
LYSMD1-201ENST00000368908 VPS13DQ5THJ4 4388 aa6.26□□□□□ -1.41
LYSMD1-201ENST00000368908 DNAH2Q9P225 4427 aa6.26□□□□□ -1.41
LYSMD1-201ENST00000368908 LINC00313P59037 77 aa6.26□□□□□ -1.41
LYSMD1-201ENST00000368908 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
LYSMD1-201ENST00000368908 NOTCH2NLQ7Z3S9 236 aa6.24□□□□□ -1.41
LYSMD1-201ENST00000368908 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
LYSMD1-201ENST00000368908 ALMS1Q8TCU4 4167 aa6.23□□□□□ -1.41
LYSMD1-201ENST00000368908 FRAS1Q86XX4 4008 aa6.22□□□□□ -1.41
LYSMD1-201ENST00000368908 Q5W150 140 aa6.22□□□□□ -1.41
LYSMD1-201ENST00000368908 UBE2DNLQ8IWF7 75 aa6.22□□□□□ -1.41
LYSMD1-201ENST00000368908 PANO1I0J062 215 aa6.21□□□□□ -1.41
LYSMD1-201ENST00000368908 SPATA8Q6RVD6 105 aa6.21□□□□□ -1.41
LYSMD1-201ENST00000368908 SPACA4Q8TDM5 124 aa6.21□□□□□ -1.41
LYSMD1-201ENST00000368908 APLNQ9ULZ1 77 aa6.2□□□□□ -1.42
LYSMD1-201ENST00000368908 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
LYSMD1-201ENST00000368908 A0A1B0GU69 56 aa6.18□□□□□ -1.42
LYSMD1-201ENST00000368908 RTL8CO15255 209 aa6.18□□□□□ -1.42
LYSMD1-201ENST00000368908 PRAC1Q96KF2 57 aa6.18□□□□□ -1.42
LYSMD1-201ENST00000368908 HECTD4Q9Y4D8 3996 aa6.17□□□□□ -1.42
LYSMD1-201ENST00000368908 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.16□□□□□ -1.42
LYSMD1-201ENST00000368908 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
LYSMD1-201ENST00000368908 Q6ZRN7 208 aaPredicted RBP6.16□□□□□ -1.42
LYSMD1-201ENST00000368908 IGLV5-52A0A0A0MRZ9 124 aa6.15□□□□□ -1.42
LYSMD1-201ENST00000368908 LINC01554Q52M75 96 aa6.15□□□□□ -1.42
LYSMD1-201ENST00000368908 DNAH6Q9C0G6 4158 aa6.14□□□□□ -1.43
LYSMD1-201ENST00000368908 SACSQ9NZJ4 4579 aa6.14□□□□□ -1.43
LYSMD1-201ENST00000368908 FAM229AH3BQW9 127 aa6.14□□□□□ -1.43
LYSMD1-201ENST00000368908 ZNF861PO60384 105 aa6.14□□□□□ -1.43
LYSMD1-201ENST00000368908 NBDYA0A0U1RRE5 68 aa6.14□□□□□ -1.43
LYSMD1-201ENST00000368908 PSORS1C2Q9UIG4 136 aa6.13□□□□□ -1.43
LYSMD1-201ENST00000368908 UQCR11O14957 56 aa6.13□□□□□ -1.43
LYSMD1-201ENST00000368908 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
LYSMD1-201ENST00000368908 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
LYSMD1-201ENST00000368908 IGKV2-30P06310 120 aa6.12□□□□□ -1.43
LYSMD1-201ENST00000368908 SPINK6Q6UWN8 80 aa6.11□□□□□ -1.43
LYSMD1-201ENST00000368908 LY6G6CO95867 125 aa6.1□□□□□ -1.43
LYSMD1-201ENST00000368908 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.43
LYSMD1-201ENST00000368908 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
LYSMD1-201ENST00000368908 ANAPC11Q9NYG5 84 aa6.09□□□□□ -1.43
LYSMD1-201ENST00000368908 PKHD1P08F94 4074 aa6.07□□□□□ -1.44
LYSMD1-201ENST00000368908 SSBP3-AS1Q7Z2R9 100 aa6.07□□□□□ -1.44
LYSMD1-201ENST00000368908 DNAH11Q96DT5 4516 aa6.06□□□□□ -1.44
LYSMD1-201ENST00000368908 FAT2Q9NYQ8 4349 aa6.06□□□□□ -1.44
LYSMD1-201ENST00000368908 DNAH17Q9UFH2 4485 aa6.05□□□□□ -1.44
LYSMD1-201ENST00000368908 RETNLBQ9BQ08 111 aa6.05□□□□□ -1.44
LYSMD1-201ENST00000368908 DNAH5Q8TE73 4624 aa6.05□□□□□ -1.44
LYSMD1-201ENST00000368908 A0A087WTM6 91 aa6.04□□□□□ -1.44
LYSMD1-201ENST00000368908 CIRBP-AS1Q8TBR5 109 aa6.04□□□□□ -1.44
LYSMD1-201ENST00000368908 IGLV7-43P04211 117 aa6.03□□□□□ -1.44
LYSMD1-201ENST00000368908 RYR3Q15413 4870 aa6.02□□□□□ -1.45
LYSMD1-201ENST00000368908 PKD1P98161 4303 aa6.02□□□□□ -1.45
LYSMD1-201ENST00000368908 RYR2Q92736 4967 aa6.02□□□□□ -1.45
LYSMD1-201ENST00000368908 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
LYSMD1-201ENST00000368908 KRTAP16-1A8MUX0 517 aa6.01□□□□□ -1.45
LYSMD1-201ENST00000368908 LCE2DQ5TA82 110 aaPredicted RBP6.01□□□□□ -1.45
LYSMD1-201ENST00000368908 IGKV2D-30A0A075B6S6 120 aa6□□□□□ -1.45
LYSMD1-201ENST00000368908 CSAG1Q6PB30 78 aa5.99□□□□□ -1.45
LYSMD1-201ENST00000368908 C1orf134Q5TEV5 83 aa5.98□□□□□ -1.45
LYSMD1-201ENST00000368908 KRTAP13-2Q52LG2 175 aa5.89□□□□□ -1.47
LYSMD1-201ENST00000368908 A0A1B0GVY2 172 aa5.88□□□□□ -1.47
LYSMD1-201ENST00000368908 A8MUU9 505 aa5.88□□□□□ -1.47
LYSMD1-201ENST00000368908 LRP1BQ9NZR2 4599 aa5.88□□□□□ -1.47
LYSMD1-201ENST00000368908 DYNC1H1Q14204 4646 aaKnown RBP5.86□□□□□ -1.47
LYSMD1-201ENST00000368908 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
LYSMD1-201ENST00000368908 H0YAA0 97 aa5.84□□□□□ -1.48
LYSMD1-201ENST00000368908 Q6ZSA8 131 aa5.84□□□□□ -1.48
LYSMD1-201ENST00000368908 VPS13BQ7Z7G8 4022 aa5.83□□□□□ -1.48
LYSMD1-201ENST00000368908 SPINK1P00995 79 aa5.82□□□□□ -1.48
LYSMD1-201ENST00000368908 EPPK1P58107 5090 aaKnown RBP5.81□□□□□ -1.48
LYSMD1-201ENST00000368908 Q8N1X5 172 aa5.81□□□□□ -1.48
LYSMD1-201ENST00000368908 FAT1Q14517 4588 aa5.8□□□□□ -1.48
LYSMD1-201ENST00000368908 LINC00304Q8N9R0 145 aa5.8□□□□□ -1.48
LYSMD1-201ENST00000368908 KRTAP10-2P60368 255 aa5.79□□□□□ -1.48
LYSMD1-201ENST00000368908 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
LYSMD1-201ENST00000368908 APOBP04114 4563 aaKnown RBP5.78□□□□□ -1.48
LYSMD1-201ENST00000368908 A0A1B0GU33 70 aa5.77□□□□□ -1.49
LYSMD1-201ENST00000368908 H1FX-AS1Q4G0G2 97 aa5.76□□□□□ -1.49
LYSMD1-201ENST00000368908 ROMO1P60602 79 aa5.75□□□□□ -1.49
LYSMD1-201ENST00000368908 TYMSOSQ8TAI1 123 aa5.75□□□□□ -1.49
LYSMD1-201ENST00000368908 A0A0A0MQY5 61 aa5.74□□□□□ -1.49
LYSMD1-201ENST00000368908 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
LYSMD1-201ENST00000368908 KRTAP10-1P60331 282 aa5.71□□□□□ -1.49
LYSMD1-201ENST00000368908 BIRC6Q9NR09 4857 aa5.71□□□□□ -1.5
LYSMD1-201ENST00000368908 KIAA1109Q2LD37 5005 aa5.71□□□□□ -1.5
LYSMD1-201ENST00000368908 K7ERS5 55 aa5.69□□□□□ -1.5
LYSMD1-201ENST00000368908 KRTAP3-1Q9BYR8 98 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms