RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 C1orf195Q5TG92 126 aa6.06□□□□□ -1.44
TPM3-209ENST00000368527 CIRBP-AS1Q8TBR5 109 aa6.06□□□□□ -1.44
TPM3-209ENST00000368527 LYSTQ99698 3801 aa6.06□□□□□ -1.44
TPM3-209ENST00000368527 IGLV7-46A0A075B6I9 117 aa6.05□□□□□ -1.44
TPM3-209ENST00000368527 LOC101927531A0A1B0GV80 90 aa6.04□□□□□ -1.44
TPM3-209ENST00000368527 STARD9Q9P2P6 4700 aa6.03□□□□□ -1.44
TPM3-209ENST00000368527 NDUFS5O43920 106 aa6.03□□□□□ -1.44
TPM3-209ENST00000368527 LIMD2Q9BT23 127 aa6.03□□□□□ -1.44
TPM3-209ENST00000368527 PRO0628Q9UI54 55 aa6.03□□□□□ -1.44
TPM3-209ENST00000368527 SACSQ9NZJ4 4579 aa6.02□□□□□ -1.45
TPM3-209ENST00000368527 HECTD4Q9Y4D8 3996 aa6.01□□□□□ -1.45
TPM3-209ENST00000368527 ALMS1Q8TCU4 4167 aa6□□□□□ -1.45
TPM3-209ENST00000368527 KRTAP10-2P60368 255 aa6□□□□□ -1.45
TPM3-209ENST00000368527 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
TPM3-209ENST00000368527 ANAPC11Q9NYG5 84 aa6□□□□□ -1.45
TPM3-209ENST00000368527 DNAH2Q9P225 4427 aa5.99□□□□□ -1.45
TPM3-209ENST00000368527 KRTAP10-1P60331 282 aa5.97□□□□□ -1.45
TPM3-209ENST00000368527 SRRM2Q9UQ35 2752 aaKnown RBP5.97□□□□□ -1.45
TPM3-209ENST00000368527 FAM229AH3BQW9 127 aa5.96□□□□□ -1.46
TPM3-209ENST00000368527 LINC00313P59037 77 aa5.96□□□□□ -1.46
TPM3-209ENST00000368527 PRR4Q16378 134 aa5.96□□□□□ -1.46
TPM3-209ENST00000368527 SPINK6Q6UWN8 80 aa5.96□□□□□ -1.46
TPM3-209ENST00000368527 LINC00336Q6ZUF6 198 aa5.96□□□□□ -1.46
TPM3-209ENST00000368527 RPS29P62273 56 aaKnown RBP5.95□□□□□ -1.46
TPM3-209ENST00000368527 SPINK1P00995 79 aa5.93□□□□□ -1.46
TPM3-209ENST00000368527 COA5Q86WW8 74 aa5.93□□□□□ -1.46
TPM3-209ENST00000368527 Q8N9P0 234 aaPredicted RBP5.93□□□□□ -1.46
TPM3-209ENST00000368527 DNAH8Q96JB1 4490 aa5.92□□□□□ -1.46
TPM3-209ENST00000368527 RYR2Q92736 4967 aa5.92□□□□□ -1.46
TPM3-209ENST00000368527 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
TPM3-209ENST00000368527 KRTAP13-2Q52LG2 175 aa5.92□□□□□ -1.46
TPM3-209ENST00000368527 SPAG11AQ6PDA7 123 aa5.92□□□□□ -1.46
TPM3-209ENST00000368527 PCOTHQ58A44 107 aa5.91□□□□□ -1.46
TPM3-209ENST00000368527 BRK1Q8WUW1 75 aa5.91□□□□□ -1.46
TPM3-209ENST00000368527 A0A087X002 238 aa5.9□□□□□ -1.46
TPM3-209ENST00000368527 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.46
TPM3-209ENST00000368527 NOTCH2NLQ7Z3S9 236 aa5.9□□□□□ -1.46
TPM3-209ENST00000368527 TYMSOSQ8TAI1 123 aa5.89□□□□□ -1.47
TPM3-209ENST00000368527 PLA2G1BP04054 148 aaKnown RBP5.88□□□□□ -1.47
TPM3-209ENST00000368527 KMT2AQ03164 3969 aa5.88□□□□□ -1.47
TPM3-209ENST00000368527 EPPK1P58107 5090 aaKnown RBP5.88□□□□□ -1.47
TPM3-209ENST00000368527 ACYP2P14621 99 aa5.87□□□□□ -1.47
TPM3-209ENST00000368527 Q5W150 140 aa5.85□□□□□ -1.47
TPM3-209ENST00000368527 LINC01558Q9Y6Z2 57 aa5.85□□□□□ -1.47
TPM3-209ENST00000368527 DNAH11Q96DT5 4516 aa5.84□□□□□ -1.47
TPM3-209ENST00000368527 PSPHP1O15172 72 aa5.84□□□□□ -1.47
TPM3-209ENST00000368527 IGKV2-30P06310 120 aa5.84□□□□□ -1.47
TPM3-209ENST00000368527 Q75L30 129 aa5.84□□□□□ -1.47
TPM3-209ENST00000368527 BIRC6Q9NR09 4857 aa5.83□□□□□ -1.48
TPM3-209ENST00000368527 A8MUN3 132 aa5.83□□□□□ -1.48
TPM3-209ENST00000368527 HRES1P13985 223 aa5.83□□□□□ -1.48
TPM3-209ENST00000368527 DMAC1Q96GE9 116 aa5.83□□□□□ -1.48
TPM3-209ENST00000368527 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
TPM3-209ENST00000368527 KRTAP16-1A8MUX0 517 aa5.82□□□□□ -1.48
TPM3-209ENST00000368527 Q5VV11 94 aa5.82□□□□□ -1.48
TPM3-209ENST00000368527 LINC00304Q8N9R0 145 aa5.82□□□□□ -1.48
TPM3-209ENST00000368527 PRR15LQ9BU68 103 aa5.82□□□□□ -1.48
TPM3-209ENST00000368527 FRAS1Q86XX4 4008 aa5.81□□□□□ -1.48
TPM3-209ENST00000368527 PRR26Q8N8Z3 221 aa5.8□□□□□ -1.48
TPM3-209ENST00000368527 HYDINQ4G0P3 5121 aa5.8□□□□□ -1.48
TPM3-209ENST00000368527 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
TPM3-209ENST00000368527 PKD1P98161 4303 aa5.77□□□□□ -1.49
TPM3-209ENST00000368527 FAT2Q9NYQ8 4349 aa5.76□□□□□ -1.49
TPM3-209ENST00000368527 A0A1B0GVY2 172 aa5.75□□□□□ -1.49
TPM3-209ENST00000368527 A6NED7 52 aa5.74□□□□□ -1.49
TPM3-209ENST00000368527 C7orf65Q6ZTY9 151 aa5.73□□□□□ -1.49
TPM3-209ENST00000368527 ATP11AUNQ6ZP68 121 aa5.72□□□□□ -1.49
TPM3-209ENST00000368527 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
TPM3-209ENST00000368527 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
TPM3-209ENST00000368527 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
TPM3-209ENST00000368527 SPTSSBQ8NFR3 76 aa5.69□□□□□ -1.5
TPM3-209ENST00000368527 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
TPM3-209ENST00000368527 A8MUU9 505 aa5.67□□□□□ -1.5
TPM3-209ENST00000368527 RETNLBQ9BQ08 111 aa5.67□□□□□ -1.5
TPM3-209ENST00000368527 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
TPM3-209ENST00000368527 KRTAP10-4P60372 401 aaPredicted RBP5.66□□□□□ -1.5
TPM3-209ENST00000368527 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
TPM3-209ENST00000368527 A0A1B0GU69 56 aa5.64□□□□□ -1.51
TPM3-209ENST00000368527 SMR3BP02814 79 aaPredicted RBP5.64□□□□□ -1.51
TPM3-209ENST00000368527 HERC2O95714 4834 aa5.64□□□□□ -1.51
TPM3-209ENST00000368527 VPS13BQ7Z7G8 4022 aa5.64□□□□□ -1.51
TPM3-209ENST00000368527 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
TPM3-209ENST00000368527 LCA10Q71F78 164 aa5.62□□□□□ -1.51
TPM3-209ENST00000368527 KRTAP17-1Q9BYP8 105 aa5.6□□□□□ -1.51
TPM3-209ENST00000368527 DYNC1H1Q14204 4646 aaKnown RBP5.59□□□□□ -1.51
TPM3-209ENST00000368527 SEC61GP60059 68 aa5.58□□□□□ -1.52
TPM3-209ENST00000368527 UQCR11O14957 56 aa5.57□□□□□ -1.52
TPM3-209ENST00000368527 SPINK7P58062 85 aa5.57□□□□□ -1.52
TPM3-209ENST00000368527 KIAA1109Q2LD37 5005 aa5.55□□□□□ -1.52
TPM3-209ENST00000368527 RYR1P21817 5038 aa5.55□□□□□ -1.52
TPM3-209ENST00000368527 PKHD1P08F94 4074 aa5.54□□□□□ -1.52
TPM3-209ENST00000368527 SPATA8Q6RVD6 105 aa5.54□□□□□ -1.52
TPM3-209ENST00000368527 C9orf92A6NGG3 77 aa5.53□□□□□ -1.52
TPM3-209ENST00000368527 KTN1-AS1Q86SY8 53 aa5.53□□□□□ -1.52
TPM3-209ENST00000368527 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
TPM3-209ENST00000368527 A6NN06 94 aa5.52□□□□□ -1.53
TPM3-209ENST00000368527 KRTAP10-8P60410 259 aa5.52□□□□□ -1.53
TPM3-209ENST00000368527 APOBP04114 4563 aaKnown RBP5.52□□□□□ -1.53
TPM3-209ENST00000368527 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
TPM3-209ENST00000368527 PCLOQ9Y6V0 5065 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms