RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 SMR3BP02814 79 aaPredicted RBP14.43□□□□□ -0.1
CLK2-203ENST00000368361 PLA2G1BP04054 148 aaKnown RBP14.43□□□□□ -0.1
CLK2-203ENST00000368361 MP68P56378 58 aa14.43□□□□□ -0.1
CLK2-203ENST00000368361 APOBP04114 4563 aaKnown RBP14.42□□□□□ -0.1
CLK2-203ENST00000368361 H0Y9P7 68 aa14.4□□□□□ -0.1
CLK2-203ENST00000368361 LINC00208Q96KT6 92 aa14.38□□□□□ -0.11
CLK2-203ENST00000368361 ATP5EP56381 51 aaPredicted RBP14.37□□□□□ -0.11
CLK2-203ENST00000368361 Q5XG85 94 aa14.35□□□□□ -0.11
CLK2-203ENST00000368361 MRPL34Q9BQ48 92 aaKnown RBP14.34□□□□□ -0.11
CLK2-203ENST00000368361 SERP1Q9Y6X1 66 aa14.34□□□□□ -0.11
CLK2-203ENST00000368361 FAT1Q14517 4588 aa14.34□□□□□ -0.11
CLK2-203ENST00000368361 TRAV22A0A0B4J277 110 aa14.33□□□□□ -0.11
CLK2-203ENST00000368361 TYMSOSQ8TAI1 123 aa14.33□□□□□ -0.11
CLK2-203ENST00000368361 NDUFS5O43920 106 aa14.32□□□□□ -0.12
CLK2-203ENST00000368361 C1orf195Q5TG92 126 aa14.32□□□□□ -0.12
CLK2-203ENST00000368361 TP53AIP1Q9HCN2 124 aa14.32□□□□□ -0.12
CLK2-203ENST00000368361 H3BPC8 53 aa14.3□□□□□ -0.12
CLK2-203ENST00000368361 C1orf64Q8NEQ6 169 aa14.27□□□□□ -0.13
CLK2-203ENST00000368361 LIMD2Q9BT23 127 aa14.27□□□□□ -0.13
CLK2-203ENST00000368361 PRR26Q8N8Z3 221 aa14.26□□□□□ -0.13
CLK2-203ENST00000368361 KRTAP10-4P60372 401 aaPredicted RBP14.25□□□□□ -0.13
CLK2-203ENST00000368361 C4orf48Q5BLP8 95 aa14.24□□□□□ -0.13
CLK2-203ENST00000368361 C8orf87E5RJ46 101 aa14.22□□□□□ -0.13
CLK2-203ENST00000368361 SPINK1P00995 79 aa14.19□□□□□ -0.14
CLK2-203ENST00000368361 LINC00313P59037 77 aa14.17□□□□□ -0.14
CLK2-203ENST00000368361 PRR4Q16378 134 aa14.16□□□□□ -0.14
CLK2-203ENST00000368361 RYR3Q15413 4870 aa14.14□□□□□ -0.15
CLK2-203ENST00000368361 LINC00304Q8N9R0 145 aa14.14□□□□□ -0.15
CLK2-203ENST00000368361 Q5W150 140 aa14.09□□□□□ -0.15
CLK2-203ENST00000368361 CYP4F30PQ9H0H9 118 aa14.09□□□□□ -0.15
CLK2-203ENST00000368361 SPANXA2-OT1Q8N9U9 137 aa14.06□□□□□ -0.16
CLK2-203ENST00000368361 RPS29P62273 56 aaKnown RBP14.05□□□□□ -0.16
CLK2-203ENST00000368361 PCOTHQ58A44 107 aa14.05□□□□□ -0.16
CLK2-203ENST00000368361 SPAG11AQ6PDA7 123 aa14.05□□□□□ -0.16
CLK2-203ENST00000368361 Q8N9P0 234 aaPredicted RBP14.05□□□□□ -0.16
CLK2-203ENST00000368361 PKHD1L1Q86WI1 4243 aa14.04□□□□□ -0.16
CLK2-203ENST00000368361 KRTAP13-3Q3SY46 172 aa14.04□□□□□ -0.16
CLK2-203ENST00000368361 KRTAP16-1A8MUX0 517 aa14.03□□□□□ -0.16
CLK2-203ENST00000368361 SMIM26A0A096LP01 95 aa14.03□□□□□ -0.16
CLK2-203ENST00000368361 FP248Q71RG6 208 aaPredicted RBP14□□□□□ -0.17
CLK2-203ENST00000368361 HSPG2P98160 4391 aa13.95□□□□□ -0.18
CLK2-203ENST00000368361 IGLV7-46A0A075B6I9 117 aa13.95□□□□□ -0.18
CLK2-203ENST00000368361 C4orf26Q17RF5 130 aa13.95□□□□□ -0.18
CLK2-203ENST00000368361 LOC101927531A0A1B0GV80 90 aa13.94□□□□□ -0.18
CLK2-203ENST00000368361 FAM229AH3BQW9 127 aa13.92□□□□□ -0.18
CLK2-203ENST00000368361 RETNLBQ9BQ08 111 aa13.92□□□□□ -0.18
CLK2-203ENST00000368361 Q5VSD8 79 aa13.85□□□□□ -0.19
CLK2-203ENST00000368361 MPLKIPQ8TAP9 179 aa13.83□□□□□ -0.19
CLK2-203ENST00000368361 RYR1P21817 5038 aa13.83□□□□□ -0.2
CLK2-203ENST00000368361 LRP1Q07954 4544 aaKnown RBP13.81□□□□□ -0.2
CLK2-203ENST00000368361 IGKV2-30P06310 120 aa13.75□□□□□ -0.21
CLK2-203ENST00000368361 TNXBP22105 4242 aa13.75□□□□□ -0.21
CLK2-203ENST00000368361 COA5Q86WW8 74 aa13.73□□□□□ -0.21
CLK2-203ENST00000368361 KRTAP17-1Q9BYP8 105 aa13.72□□□□□ -0.21
CLK2-203ENST00000368361 C9orf92A6NGG3 77 aa13.71□□□□□ -0.21
CLK2-203ENST00000368361 Q8N1X5 172 aa13.71□□□□□ -0.21
CLK2-203ENST00000368361 FLG2Q5D862 2391 aaPredicted RBP13.69□□□□□ -0.22
CLK2-203ENST00000368361 HRES1P13985 223 aa13.69□□□□□ -0.22
CLK2-203ENST00000368361 KIAA1109Q2LD37 5005 aa13.68□□□□□ -0.22
CLK2-203ENST00000368361 KRTAP10-8P60410 259 aa13.66□□□□□ -0.22
CLK2-203ENST00000368361 Q1T7F1 81 aa13.66□□□□□ -0.22
CLK2-203ENST00000368361 IGKV2D-30A0A075B6S6 120 aa13.65□□□□□ -0.22
CLK2-203ENST00000368361 EPPK1P58107 5090 aaKnown RBP13.62□□□□□ -0.23
CLK2-203ENST00000368361 FAT3Q8TDW7 4589 aa13.62□□□□□ -0.23
CLK2-203ENST00000368361 C20orf166-AS1Q96NR2 134 aa13.58□□□□□ -0.24
CLK2-203ENST00000368361 A8MUU9 505 aa13.56□□□□□ -0.24
CLK2-203ENST00000368361 DMAC1Q96GE9 116 aa13.54□□□□□ -0.24
CLK2-203ENST00000368361 ACYP2P14621 99 aa13.51□□□□□ -0.25
CLK2-203ENST00000368361 MYCBP2O75592 4640 aa13.5□□□□□ -0.25
CLK2-203ENST00000368361 PSPHP1O15172 72 aa13.49□□□□□ -0.25
CLK2-203ENST00000368361 V9GYY9 64 aa13.49□□□□□ -0.25
CLK2-203ENST00000368361 C7orf65Q6ZTY9 151 aa13.48□□□□□ -0.25
CLK2-203ENST00000368361 A8MUN3 132 aa13.42□□□□□ -0.26
CLK2-203ENST00000368361 DMBT1Q9UGM3 2413 aaPredicted RBP13.41□□□□□ -0.26
CLK2-203ENST00000368361 MT1HL1P0DM35 61 aa13.39□□□□□ -0.27
CLK2-203ENST00000368361 Q75L30 129 aa13.37□□□□□ -0.27
CLK2-203ENST00000368361 CHKB-CPT1BH3BT56 60 aa13.34□□□□□ -0.27
CLK2-203ENST00000368361 PRR15LQ9BU68 103 aa13.33□□□□□ -0.28
CLK2-203ENST00000368361 Q5VV11 94 aa13.32□□□□□ -0.28
CLK2-203ENST00000368361 BRK1Q8WUW1 75 aa13.3□□□□□ -0.28
CLK2-203ENST00000368361 LINC01558Q9Y6Z2 57 aa13.3□□□□□ -0.28
CLK2-203ENST00000368361 SVIPQ8NHG7 77 aa13.29□□□□□ -0.28
CLK2-203ENST00000368361 SPINK7P58062 85 aa13.25□□□□□ -0.29
CLK2-203ENST00000368361 KRTAP4-5Q9BYR2 181 aa13.19□□□□□ -0.3
CLK2-203ENST00000368361 XP32Q5T750 250 aa13.18□□□□□ -0.3
CLK2-203ENST00000368361 PRO0628Q9UI54 55 aa13.18□□□□□ -0.3
CLK2-203ENST00000368361 ATP11AUNQ6ZP68 121 aa13.17□□□□□ -0.3
CLK2-203ENST00000368361 RPL37P61927 97 aaKnown RBP13.15□□□□□ -0.3
CLK2-203ENST00000368361 KRTAP3-1Q9BYR8 98 aa13.1□□□□□ -0.31
CLK2-203ENST00000368361 A6NED7 52 aa13.01□□□□□ -0.33
CLK2-203ENST00000368361 ABCA13Q86UQ4 5058 aa13.01□□□□□ -0.33
CLK2-203ENST00000368361 A8MU10 97 aa13□□□□□ -0.33
CLK2-203ENST00000368361 A0A1B0GU69 56 aa12.96□□□□□ -0.33
CLK2-203ENST00000368361 COX6B2Q6YFQ2 88 aa12.96□□□□□ -0.33
CLK2-203ENST00000368361 TPRXLQ17RH7 258 aa12.93□□□□□ -0.34
CLK2-203ENST00000368361 LCA10Q71F78 164 aa12.91□□□□□ -0.34
CLK2-203ENST00000368361 LRP2P98164 4655 aa12.88□□□□□ -0.35
CLK2-203ENST00000368361 LPAP08519 4548 aa12.87□□□□□ -0.35
CLK2-203ENST00000368361 SPTSSBQ8NFR3 76 aa12.85□□□□□ -0.35
CLK2-203ENST00000368361 CDC42SE1Q9NRR8 79 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms