RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 A6NED7 52 aa8.9□□□□□ -0.98
PRKN-204ENST00000366896 SPTSSBQ8NFR3 76 aa8.9□□□□□ -0.99
PRKN-204ENST00000366896 FAT2Q9NYQ8 4349 aa8.89□□□□□ -0.99
PRKN-204ENST00000366896 LINC00483Q53H64 154 aa8.89□□□□□ -0.99
PRKN-204ENST00000366896 SPACA4Q8TDM5 124 aa8.89□□□□□ -0.99
PRKN-204ENST00000366896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.89□□□□□ -0.99
PRKN-204ENST00000366896 ASB16-AS1Q495Z4 193 aa8.88□□□□□ -0.99
PRKN-204ENST00000366896 PCOTHQ58A44 107 aa8.87□□□□□ -0.99
PRKN-204ENST00000366896 TP53AIP1Q9HCN2 124 aa8.87□□□□□ -0.99
PRKN-204ENST00000366896 DNAH11Q96DT5 4516 aa8.86□□□□□ -0.99
PRKN-204ENST00000366896 IGLV9-49A0A0B4J1Y8 123 aa8.86□□□□□ -0.99
PRKN-204ENST00000366896 CDC42SE1Q9NRR8 79 aa8.86□□□□□ -0.99
PRKN-204ENST00000366896 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
PRKN-204ENST00000366896 LINC01558Q9Y6Z2 57 aa8.86□□□□□ -0.99
PRKN-204ENST00000366896 Q96NJ1 140 aa8.85□□□□□ -0.99
PRKN-204ENST00000366896 A6NN06 94 aa8.85□□□□□ -0.99
PRKN-204ENST00000366896 MOBPQ13875 183 aa8.84□□□□□ -0.99
PRKN-204ENST00000366896 ZNF706Q9Y5V0 76 aaPredicted RBP8.84□□□□□ -0.99
PRKN-204ENST00000366896 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
PRKN-204ENST00000366896 RYR3Q15413 4870 aa8.82□□□□□ -1
PRKN-204ENST00000366896 NDUFS5O43920 106 aa8.82□□□□□ -1
PRKN-204ENST00000366896 SPAG11AQ6PDA7 123 aa8.81□□□□□ -1
PRKN-204ENST00000366896 C8orf17Q9NRJ1 99 aa8.81□□□□□ -1
PRKN-204ENST00000366896 KRTAP10-2P60368 255 aa8.8□□□□□ -1
PRKN-204ENST00000366896 DNAH5Q8TE73 4624 aa8.79□□□□□ -1
PRKN-204ENST00000366896 PKD1P98161 4303 aa8.79□□□□□ -1
PRKN-204ENST00000366896 IGLV5-52A0A0A0MRZ9 124 aa8.79□□□□□ -1
PRKN-204ENST00000366896 RBM12B-AS1Q9P1G2 102 aa8.79□□□□□ -1
PRKN-204ENST00000366896 HRES1P13985 223 aa8.77□□□□□ -1.01
PRKN-204ENST00000366896 DNAH8Q96JB1 4490 aa8.76□□□□□ -1.01
PRKN-204ENST00000366896 ANAPC11Q9NYG5 84 aa8.76□□□□□ -1.01
PRKN-204ENST00000366896 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
PRKN-204ENST00000366896 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
PRKN-204ENST00000366896 A0A1B0GVY2 172 aa8.74□□□□□ -1.01
PRKN-204ENST00000366896 ZNF861PO60384 105 aa8.74□□□□□ -1.01
PRKN-204ENST00000366896 SPINK7P58062 85 aa8.73□□□□□ -1.01
PRKN-204ENST00000366896 IGHV6-1A0A0B4J1U7 121 aa8.72□□□□□ -1.01
PRKN-204ENST00000366896 MRPL34Q9BQ48 92 aaKnown RBP8.72□□□□□ -1.01
PRKN-204ENST00000366896 C7orf65Q6ZTY9 151 aa8.71□□□□□ -1.02
PRKN-204ENST00000366896 CDK2AP2O75956 126 aa8.69□□□□□ -1.02
PRKN-204ENST00000366896 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
PRKN-204ENST00000366896 PKHD1P08F94 4074 aa8.67□□□□□ -1.02
PRKN-204ENST00000366896 A0A087X002 238 aa8.66□□□□□ -1.02
PRKN-204ENST00000366896 NOTCH2NLQ7Z3S9 236 aa8.66□□□□□ -1.02
PRKN-204ENST00000366896 DYNC1H1Q14204 4646 aaKnown RBP8.64□□□□□ -1.03
PRKN-204ENST00000366896 LRP1BQ9NZR2 4599 aa8.64□□□□□ -1.03
PRKN-204ENST00000366896 Q6ZSA8 131 aa8.63□□□□□ -1.03
PRKN-204ENST00000366896 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
PRKN-204ENST00000366896 KRTAP13-3Q3SY46 172 aa8.61□□□□□ -1.03
PRKN-204ENST00000366896 IGLV7-43P04211 117 aa8.6□□□□□ -1.03
PRKN-204ENST00000366896 Q5W150 140 aa8.59□□□□□ -1.03
PRKN-204ENST00000366896 SPINK6Q6UWN8 80 aa8.58□□□□□ -1.04
PRKN-204ENST00000366896 SSBP3-AS1Q7Z2R9 100 aa8.58□□□□□ -1.04
PRKN-204ENST00000366896 CIRBP-AS1Q8TBR5 109 aa8.57□□□□□ -1.04
PRKN-204ENST00000366896 C8orf87E5RJ46 101 aa8.56□□□□□ -1.04
PRKN-204ENST00000366896 ACYP2P14621 99 aa8.56□□□□□ -1.04
PRKN-204ENST00000366896 APOBP04114 4563 aaKnown RBP8.53□□□□□ -1.04
PRKN-204ENST00000366896 DMAC1Q96GE9 116 aa8.5□□□□□ -1.05
PRKN-204ENST00000366896 LINC00313P59037 77 aa8.5□□□□□ -1.05
PRKN-204ENST00000366896 EPPK1P58107 5090 aaKnown RBP8.49□□□□□ -1.05
PRKN-204ENST00000366896 PLA2G1BP04054 148 aaKnown RBP8.44□□□□□ -1.06
PRKN-204ENST00000366896 A0A1B0GU69 56 aa8.43□□□□□ -1.06
PRKN-204ENST00000366896 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
PRKN-204ENST00000366896 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
PRKN-204ENST00000366896 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
PRKN-204ENST00000366896 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
PRKN-204ENST00000366896 SMR3BP02814 79 aaPredicted RBP8.4□□□□□ -1.07
PRKN-204ENST00000366896 ADM2Q7Z4H4 148 aa8.39□□□□□ -1.07
PRKN-204ENST00000366896 RYR1P21817 5038 aa8.39□□□□□ -1.07
PRKN-204ENST00000366896 HSPG2P98160 4391 aa8.38□□□□□ -1.07
PRKN-204ENST00000366896 VPS13BQ7Z7G8 4022 aa8.38□□□□□ -1.07
PRKN-204ENST00000366896 RETNLBQ9BQ08 111 aa8.38□□□□□ -1.07
PRKN-204ENST00000366896 IGKV2-30P06310 120 aa8.37□□□□□ -1.07
PRKN-204ENST00000366896 FAT1Q14517 4588 aa8.37□□□□□ -1.07
PRKN-204ENST00000366896 KRTAP16-1A8MUX0 517 aa8.34□□□□□ -1.07
PRKN-204ENST00000366896 UQCR11O14957 56 aa8.34□□□□□ -1.07
PRKN-204ENST00000366896 MIR22HGQ0VDD5 57 aa8.34□□□□□ -1.07
PRKN-204ENST00000366896 KIAA1109Q2LD37 5005 aa8.33□□□□□ -1.08
PRKN-204ENST00000366896 KRTAP10-4P60372 401 aaPredicted RBP8.31□□□□□ -1.08
PRKN-204ENST00000366896 KRTAP1-4P0C5Y4 121 aa8.3□□□□□ -1.08
PRKN-204ENST00000366896 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
PRKN-204ENST00000366896 BIRC6Q9NR09 4857 aa8.29□□□□□ -1.08
PRKN-204ENST00000366896 KRTAP17-1Q9BYP8 105 aa8.28□□□□□ -1.08
PRKN-204ENST00000366896 Q5VSD8 79 aa8.26□□□□□ -1.09
PRKN-204ENST00000366896 Q8N1X5 172 aa8.23□□□□□ -1.09
PRKN-204ENST00000366896 SPINK1P00995 79 aa8.22□□□□□ -1.09
PRKN-204ENST00000366896 PKHD1L1Q86WI1 4243 aa8.21□□□□□ -1.09
PRKN-204ENST00000366896 IGKV2D-30A0A075B6S6 120 aa8.21□□□□□ -1.1
PRKN-204ENST00000366896 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
PRKN-204ENST00000366896 RPS29P62273 56 aaKnown RBP8.19□□□□□ -1.1
PRKN-204ENST00000366896 TYMSOSQ8TAI1 123 aa8.17□□□□□ -1.1
PRKN-204ENST00000366896 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
PRKN-204ENST00000366896 HERC2O95714 4834 aa8.14□□□□□ -1.11
PRKN-204ENST00000366896 KRTAP4-5Q9BYR2 181 aa8.1□□□□□ -1.11
PRKN-204ENST00000366896 LINC00304Q8N9R0 145 aa8.07□□□□□ -1.12
PRKN-204ENST00000366896 FAT3Q8TDW7 4589 aa8.04□□□□□ -1.12
PRKN-204ENST00000366896 LRP1Q07954 4544 aaKnown RBP8.03□□□□□ -1.12
PRKN-204ENST00000366896 FLG2Q5D862 2391 aaPredicted RBP8.02□□□□□ -1.13
PRKN-204ENST00000366896 ABCA13Q86UQ4 5058 aa8□□□□□ -1.13
PRKN-204ENST00000366896 H0YAA0 97 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms