RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 A0A0G2JQZ4 141 aa4.35□□□□□ -1.71
YBX3-204ENST00000366290 SPINK1P00995 79 aa4.35□□□□□ -1.71
YBX3-204ENST00000366290 RPS29P62273 56 aaKnown RBP4.35□□□□□ -1.71
YBX3-204ENST00000366290 C9orf153Q5TBE3 101 aa4.35□□□□□ -1.71
YBX3-204ENST00000366290 TPRXLQ17RH7 258 aa4.34□□□□□ -1.71
YBX3-204ENST00000366290 OCIAD2Q56VL3 154 aa4.34□□□□□ -1.71
YBX3-204ENST00000366290 MUC17Q685J3 4493 aa4.34□□□□□ -1.71
YBX3-204ENST00000366290 A0A1W2PPM0 123 aa4.33□□□□□ -1.72
YBX3-204ENST00000366290 SNCGO76070 127 aa4.33□□□□□ -1.72
YBX3-204ENST00000366290 COL5A1-AS1Q5SY13 56 aa4.33□□□□□ -1.72
YBX3-204ENST00000366290 FP248Q71RG6 208 aaPredicted RBP4.33□□□□□ -1.72
YBX3-204ENST00000366290 RETNLBQ9BQ08 111 aa4.33□□□□□ -1.72
YBX3-204ENST00000366290 ORMDL1Q9P0S3 153 aa4.33□□□□□ -1.72
YBX3-204ENST00000366290 DNAL4O96015 105 aa4.32□□□□□ -1.72
YBX3-204ENST00000366290 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
YBX3-204ENST00000366290 ATXN8Q156A1 80 aa4.32□□□□□ -1.72
YBX3-204ENST00000366290 FABP2P12104 132 aa4.31□□□□□ -1.72
YBX3-204ENST00000366290 LYRM7Q5U5X0 104 aa4.31□□□□□ -1.72
YBX3-204ENST00000366290 IGFL1Q6UW32 110 aa4.31□□□□□ -1.72
YBX3-204ENST00000366290 TRBV20-1A0A075B6N2 111 aa4.3□□□□□ -1.72
YBX3-204ENST00000366290 F8WEM9 126 aa4.3□□□□□ -1.72
YBX3-204ENST00000366290 TMEM256-PLSCR3K7ERE1 68 aa4.3□□□□□ -1.72
YBX3-204ENST00000366290 BAALC-AS2P0C853 105 aa4.3□□□□□ -1.72
YBX3-204ENST00000366290 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
YBX3-204ENST00000366290 CD164Q04900 197 aa4.3□□□□□ -1.72
YBX3-204ENST00000366290 H3BMG7 143 aa4.29□□□□□ -1.72
YBX3-204ENST00000366290 H3BQ85 93 aa4.29□□□□□ -1.72
YBX3-204ENST00000366290 Q6JHZ5 121 aa4.29□□□□□ -1.72
YBX3-204ENST00000366290 HRCT1Q6UXD1 115 aa4.29□□□□□ -1.72
YBX3-204ENST00000366290 FAT4Q6V0I7 4981 aa4.29□□□□□ -1.72
YBX3-204ENST00000366290 C9JAW5 83 aa4.28□□□□□ -1.72
YBX3-204ENST00000366290 SPCS1Q9Y6A9 102 aa4.28□□□□□ -1.72
YBX3-204ENST00000366290 A0A1B0GV72 72 aa4.27□□□□□ -1.73
YBX3-204ENST00000366290 KRTAP13-3Q3SY46 172 aa4.27□□□□□ -1.73
YBX3-204ENST00000366290 Q5XG85 94 aa4.27□□□□□ -1.73
YBX3-204ENST00000366290 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
YBX3-204ENST00000366290 ANKRD29Q8N6D5 301 aa4.27□□□□□ -1.73
YBX3-204ENST00000366290 TRBV7-4A0A0J9YYF1 115 aa4.26□□□□□ -1.73
YBX3-204ENST00000366290 TRBV7-7A0A0K0K1E9 115 aa4.26□□□□□ -1.73
YBX3-204ENST00000366290 A0A1W2PNM2 257 aa4.26□□□□□ -1.73
YBX3-204ENST00000366290 K7EP34 96 aa4.26□□□□□ -1.73
YBX3-204ENST00000366290 Q6Q795 121 aa4.26□□□□□ -1.73
YBX3-204ENST00000366290 PRO0461Q9UI25 63 aa4.26□□□□□ -1.73
YBX3-204ENST00000366290 OBSCN-AS1Q96MR7 158 aa4.25□□□□□ -1.73
YBX3-204ENST00000366290 H3BT86 120 aa4.24□□□□□ -1.73
YBX3-204ENST00000366290 RBM3P98179 157 aaKnown RBP4.23□□□□□ -1.73
YBX3-204ENST00000366290 TEN1Q86WV5 123 aa4.23□□□□□ -1.73
YBX3-204ENST00000366290 Q8N9L7 120 aa4.23□□□□□ -1.73
YBX3-204ENST00000366290 LIMD2Q9BT23 127 aa4.23□□□□□ -1.73
YBX3-204ENST00000366290 A0A0U1RQV1 116 aa4.22□□□□□ -1.73
YBX3-204ENST00000366290 ASB16-AS1Q495Z4 193 aa4.22□□□□□ -1.73
YBX3-204ENST00000366290 C1orf195Q5TG92 126 aa4.22□□□□□ -1.73
YBX3-204ENST00000366290 A0A087WSZ3 146 aa4.21□□□□□ -1.74
YBX3-204ENST00000366290 LOC110117498A0A087WWA1 95 aa4.21□□□□□ -1.74
YBX3-204ENST00000366290 JMJD7-PLA2G4BH0Y9G9 81 aa4.21□□□□□ -1.74
YBX3-204ENST00000366290 CCKP06307 115 aa4.21□□□□□ -1.74
YBX3-204ENST00000366290 Q6ZQT0 140 aa4.21□□□□□ -1.74
YBX3-204ENST00000366290 C14orf132Q9NPU4 83 aa4.21□□□□□ -1.74
YBX3-204ENST00000366290 GTF2H5Q6ZYL4 71 aa4.2□□□□□ -1.74
YBX3-204ENST00000366290 Q96NJ1 140 aa4.2□□□□□ -1.74
YBX3-204ENST00000366290 DSCR8Q96T75 97 aa4.2□□□□□ -1.74
YBX3-204ENST00000366290 A0A1B0GV90 55 aa4.18□□□□□ -1.74
YBX3-204ENST00000366290 VPS25Q9BRG1 176 aa4.17□□□□□ -1.74
YBX3-204ENST00000366290 SS18L2Q9UHA2 77 aa4.17□□□□□ -1.74
YBX3-204ENST00000366290 F8W1H4 67 aa4.16□□□□□ -1.74
YBX3-204ENST00000366290 PDE6GP18545 87 aa4.16□□□□□ -1.74
YBX3-204ENST00000366290 LINC00472Q9H8W2 130 aa4.16□□□□□ -1.74
YBX3-204ENST00000366290 A0A1B0GW54 56 aa4.14□□□□□ -1.75
YBX3-204ENST00000366290 ETDBQ3ZM63 59 aa4.14□□□□□ -1.75
YBX3-204ENST00000366290 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
YBX3-204ENST00000366290 DEFB116Q30KQ4 102 aa4.13□□□□□ -1.75
YBX3-204ENST00000366290 C9orf92A6NGG3 77 aa4.12□□□□□ -1.75
YBX3-204ENST00000366290 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
YBX3-204ENST00000366290 IGKV4-1P06312 121 aa4.11□□□□□ -1.75
YBX3-204ENST00000366290 SIGMAR1Q99720 223 aa4.1□□□□□ -1.75
YBX3-204ENST00000366290 CRCT1Q9UGL9 99 aa4.09□□□□□ -1.75
YBX3-204ENST00000366290 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
YBX3-204ENST00000366290 PCOTHQ58A44 107 aa4.08□□□□□ -1.76
YBX3-204ENST00000366290 LINC00846Q9NV44 126 aa4.08□□□□□ -1.76
YBX3-204ENST00000366290 RPL37P61927 97 aaKnown RBP4.07□□□□□ -1.76
YBX3-204ENST00000366290 NREPQ16612 68 aa4.07□□□□□ -1.76
YBX3-204ENST00000366290 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
YBX3-204ENST00000366290 IGKV3D-7A0A0C4DH55 119 aa4.06□□□□□ -1.76
YBX3-204ENST00000366290 A0A1B0GVX0 72 aa4.06□□□□□ -1.76
YBX3-204ENST00000366290 A8MWP4 228 aa4.06□□□□□ -1.76
YBX3-204ENST00000366290 J3KT08 172 aa4.06□□□□□ -1.76
YBX3-204ENST00000366290 IGHV6-1A0A0B4J1U7 121 aa4.05□□□□□ -1.76
YBX3-204ENST00000366290 A8MUU9 505 aa4.04□□□□□ -1.76
YBX3-204ENST00000366290 LINC00313P59037 77 aa4.04□□□□□ -1.76
YBX3-204ENST00000366290 C20orf166-AS1Q96NR2 134 aa4.04□□□□□ -1.76
YBX3-204ENST00000366290 C8orf87E5RJ46 101 aa4.03□□□□□ -1.76
YBX3-204ENST00000366290 K7EQZ3 153 aa4.03□□□□□ -1.76
YBX3-204ENST00000366290 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
YBX3-204ENST00000366290 PRR15Q8IV56 129 aa4.03□□□□□ -1.76
YBX3-204ENST00000366290 FAM240AA0A1B0GVK7 77 aa4.02□□□□□ -1.77
YBX3-204ENST00000366290 BPY2O14599 106 aa4.02□□□□□ -1.77
YBX3-204ENST00000366290 UBL5Q9BZL1 73 aa4.02□□□□□ -1.77
YBX3-204ENST00000366290 C8orf17Q9NRJ1 99 aa4.02□□□□□ -1.77
YBX3-204ENST00000366290 FLGP20930 4061 aaPredicted RBP4.01□□□□□ -1.77
YBX3-204ENST00000366290 NDUFB1O75438 58 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms