RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 COL6A3P12111 3177 aa0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 EP300Q09472 2414 aaPredicted RBP0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 NBEAQ8NFP9 2946 aa0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 C9orf92A6NGG3 77 aa0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 HTN3P15516 51 aa0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 DEFB135Q30KP9 77 aa0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 KRTAP21-3Q3LHN1 58 aa0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 NBASA2RRP1 2371 aa0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 RP1L1Q8IWN7 2480 aaPredicted RBP0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 MEGF8Q7Z7M0 2845 aa0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 ANKHD1Q8IWZ3 2542 aaKnown RBP0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 NCOR2Q9Y618 2525 aa0.64□□□□□ -2.31
RNU4-42P-201ENST00000364738 NAV2Q8IVL1 2488 aa0.63□□□□□ -2.31
RNU4-42P-201ENST00000364738 CREBBPQ92793 2442 aa0.63□□□□□ -2.31
RNU4-42P-201ENST00000364738 CRYBG3Q68DQ2 2970 aa0.63□□□□□ -2.31
RNU4-42P-201ENST00000364738 ITPR1Q14643 2758 aa0.63□□□□□ -2.31
RNU4-42P-201ENST00000364738 HELZ2Q9BYK8 2649 aaKnown RBP0.63□□□□□ -2.31
RNU4-42P-201ENST00000364738 ITPR3Q14573 2671 aa0.62□□□□□ -2.31
RNU4-42P-201ENST00000364738 TTC28Q96AY4 2481 aa0.62□□□□□ -2.31
RNU4-42P-201ENST00000364738 ZNF292O60281 2723 aa0.62□□□□□ -2.31
RNU4-42P-201ENST00000364738 AKAP13Q12802 2813 aa0.62□□□□□ -2.31
RNU4-42P-201ENST00000364738 FAM186AA6NE01 2351 aa0.62□□□□□ -2.31
RNU4-42P-201ENST00000364738 CELSR1Q9NYQ6 3014 aa0.62□□□□□ -2.31
RNU4-42P-201ENST00000364738 DMBT1Q9UGM3 2413 aaPredicted RBP0.62□□□□□ -2.31
RNU4-42P-201ENST00000364738 SETD2Q9BYW2 2564 aaPredicted RBP0.61□□□□□ -2.31
RNU4-42P-201ENST00000364738 PRUNE2Q8WUY3 3088 aa0.61□□□□□ -2.31
RNU4-42P-201ENST00000364738 ZZEF1O43149 2961 aa0.61□□□□□ -2.31
RNU4-42P-201ENST00000364738 HECTD1Q9ULT8 2610 aa0.61□□□□□ -2.31
RNU4-42P-201ENST00000364738 USP9YO00507 2555 aaPredicted RBP0.61□□□□□ -2.31
RNU4-42P-201ENST00000364738 PTPN13Q12923 2485 aa0.61□□□□□ -2.31
RNU4-42P-201ENST00000364738 LRBAP50851 2863 aa0.61□□□□□ -2.31
RNU4-42P-201ENST00000364738 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
RNU4-42P-201ENST00000364738 USP24Q9UPU5 2620 aa0.61□□□□□ -2.31
RNU4-42P-201ENST00000364738 SPG11Q96JI7 2443 aa0.6□□□□□ -2.31
RNU4-42P-201ENST00000364738 LRRK2Q5S007 2527 aa0.6□□□□□ -2.31
RNU4-42P-201ENST00000364738 M0R2T5 61 aa0.6□□□□□ -2.31
RNU4-42P-201ENST00000364738 DEFB4AO15263 64 aa0.6□□□□□ -2.31
RNU4-42P-201ENST00000364738 HIVEP3Q5T1R4 2406 aa0.6□□□□□ -2.31
RNU4-42P-201ENST00000364738 CHD9Q3L8U1 2897 aa0.6□□□□□ -2.31
RNU4-42P-201ENST00000364738 FRYLO94915 3013 aa0.6□□□□□ -2.31
RNU4-42P-201ENST00000364738 CFAP54Q96N23 3096 aa0.6□□□□□ -2.31
RNU4-42P-201ENST00000364738 CACNA1AO00555 2505 aa0.6□□□□□ -2.31
RNU4-42P-201ENST00000364738 SRCAPQ6ZRS2 3230 aa0.59□□□□□ -2.31
RNU4-42P-201ENST00000364738 BDP1A6H8Y1 2624 aa0.59□□□□□ -2.31
RNU4-42P-201ENST00000364738 RIF1Q5UIP0 2472 aaKnown RBP0.59□□□□□ -2.32
RNU4-42P-201ENST00000364738 NIPBLQ6KC79 2804 aaeCLIP0.59□□□□□ -2.32
RNU4-42P-201ENST00000364738 BOD1L1Q8NFC6 3051 aa0.58□□□□□ -2.32
RNU4-42P-201ENST00000364738 SONP18583 2426 aaKnown RBP0.58□□□□□ -2.32
RNU4-42P-201ENST00000364738 NF1P21359 2839 aa0.58□□□□□ -2.32
RNU4-42P-201ENST00000364738 RANBP2P49792 3224 aaKnown RBP0.58□□□□□ -2.32
RNU4-42P-201ENST00000364738 PIEZO1Q92508 2521 aa0.58□□□□□ -2.32
RNU4-42P-201ENST00000364738 POLQO75417 2590 aa0.58□□□□□ -2.32
RNU4-42P-201ENST00000364738 APCP25054 2843 aa0.58□□□□□ -2.32
RNU4-42P-201ENST00000364738 EPG5Q9HCE0 2579 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 UTP20O75691 2785 aaKnown RBP0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 CENPEQ02224 2701 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 CFAP46Q8IYW2 2715 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 VPS13AQ96RL7 3174 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 KRTAP2-3P0C7H8 128 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 SMR3AQ99954 134 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 ATRQ13535 2644 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 SETXQ7Z333 2677 aaKnown RBP0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 COL7A1Q02388 2944 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 TGP01266 2768 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 TENM4Q6N022 2769 aa0.57□□□□□ -2.32
RNU4-42P-201ENST00000364738 FLNCQ14315 2725 aa0.56□□□□□ -2.32
RNU4-42P-201ENST00000364738 FRYQ5TBA9 3013 aa0.56□□□□□ -2.32
RNU4-42P-201ENST00000364738 TEX15Q9BXT5 2789 aa0.56□□□□□ -2.32
RNU4-42P-201ENST00000364738 TLN1Q9Y490 2541 aaKnown RBP0.56□□□□□ -2.32
RNU4-42P-201ENST00000364738 KRTAP8-1Q8IUC2 63 aa0.56□□□□□ -2.32
RNU4-42P-201ENST00000364738 TRIOO75962 3097 aa0.56□□□□□ -2.32
RNU4-42P-201ENST00000364738 PDZD2O15018 2839 aa0.56□□□□□ -2.32
RNU4-42P-201ENST00000364738 ACANP16112 2415 aa0.56□□□□□ -2.32
RNU4-42P-201ENST00000364738 KALRNO60229 2985 aa0.56□□□□□ -2.32
RNU4-42P-201ENST00000364738 ZFHX4Q86UP3 3567 aa0.56□□□□□ -2.32
RNU4-42P-201ENST00000364738 HTTP42858 3142 aa0.55□□□□□ -2.32
RNU4-42P-201ENST00000364738 DNAH12Q6ZR08 3092 aa0.55□□□□□ -2.32
RNU4-42P-201ENST00000364738 UTRNP46939 3433 aa0.55□□□□□ -2.32
RNU4-42P-201ENST00000364738 USP9XQ93008 2570 aaPredicted RBP0.55□□□□□ -2.32
RNU4-42P-201ENST00000364738 DMXL1Q9Y485 3027 aa0.55□□□□□ -2.32
RNU4-42P-201ENST00000364738 CFAP47Q6ZTR5 3102 aa0.55□□□□□ -2.32
RNU4-42P-201ENST00000364738 DCHS2Q6V1P9 2916 aa0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 CHD8Q9HCK8 2581 aa0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 NBEAL1Q6ZS30 2694 aa0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 GCN1Q92616 2671 aaKnown RBP0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 WDFY4Q6ZS81 3184 aa0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 MKI67P46013 3256 aaKnown RBP0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 GOLGB1Q14789 3259 aaKnown RBP0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 TACC2O95359 2948 aa0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 KRTAP10-4P60372 401 aaPredicted RBP0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 TEP1Q99973 2627 aaKnown RBP0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 C5orf42Q9H799 3197 aa0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 DOPEY1Q5JWR5 2465 aa0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 RELNP78509 3460 aa0.54□□□□□ -2.32
RNU4-42P-201ENST00000364738 ATMQ13315 3056 aa0.53□□□□□ -2.32
RNU4-42P-201ENST00000364738 ANKRD11Q6UB99 2663 aaPredicted RBP0.53□□□□□ -2.32
RNU4-42P-201ENST00000364738 ITPR2Q14571 2701 aa0.53□□□□□ -2.32
RNU4-42P-201ENST00000364738 CELSR3Q9NYQ7 3312 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms