RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 A0A0D9SG42 100 aa10.67□□□□□ -0.7
SMG5-201ENST00000361813 KMT2BQ9UMN6 2715 aaPredicted RBP10.66□□□□□ -0.7
SMG5-201ENST00000361813 A0A1B0GU33 70 aa10.65□□□□□ -0.7
SMG5-201ENST00000361813 CSAG1Q6PB30 78 aa10.65□□□□□ -0.7
SMG5-201ENST00000361813 A0A087X002 238 aa10.65□□□□□ -0.71
SMG5-201ENST00000361813 NOTCH2NLQ7Z3S9 236 aa10.65□□□□□ -0.71
SMG5-201ENST00000361813 CRIPTQ9P021 101 aa10.63□□□□□ -0.71
SMG5-201ENST00000361813 CELSR1Q9NYQ6 3014 aa10.63□□□□□ -0.71
SMG5-201ENST00000361813 DMAC1Q96GE9 116 aa10.59□□□□□ -0.71
SMG5-201ENST00000361813 LINC00483Q53H64 154 aa10.57□□□□□ -0.72
SMG5-201ENST00000361813 FLG2Q5D862 2391 aaPredicted RBP10.56□□□□□ -0.72
SMG5-201ENST00000361813 A6NN06 94 aa10.54□□□□□ -0.72
SMG5-201ENST00000361813 H3BS24 57 aa10.54□□□□□ -0.72
SMG5-201ENST00000361813 SVEP1Q4LDE5 3571 aa10.49□□□□□ -0.73
SMG5-201ENST00000361813 CUBNO60494 3623 aa10.44□□□□□ -0.74
SMG5-201ENST00000361813 ADM2Q7Z4H4 148 aa10.4□□□□□ -0.75
SMG5-201ENST00000361813 TENM3Q9P273 2699 aa10.39□□□□□ -0.75
SMG5-201ENST00000361813 SPATA8Q6RVD6 105 aa10.39□□□□□ -0.75
SMG5-201ENST00000361813 KRTAP13-1Q8IUC0 172 aa10.34□□□□□ -0.75
SMG5-201ENST00000361813 KRTAP10-2P60368 255 aa10.34□□□□□ -0.75
SMG5-201ENST00000361813 TENM4Q6N022 2769 aa10.31□□□□□ -0.76
SMG5-201ENST00000361813 KRTAP10-1P60331 282 aa10.29□□□□□ -0.76
SMG5-201ENST00000361813 ASB16-AS1Q495Z4 193 aa10.29□□□□□ -0.76
SMG5-201ENST00000361813 Q6ZRN7 208 aaPredicted RBP10.28□□□□□ -0.76
SMG5-201ENST00000361813 PDZD2O15018 2839 aa10.26□□□□□ -0.77
SMG5-201ENST00000361813 H1FX-AS1Q4G0G2 97 aa10.23□□□□□ -0.77
SMG5-201ENST00000361813 TENM1Q9UKZ4 2725 aa10.23□□□□□ -0.77
SMG5-201ENST00000361813 SPENQ96T58 3664 aaKnown RBP10.22□□□□□ -0.77
SMG5-201ENST00000361813 VWFP04275 2813 aa10.22□□□□□ -0.77
SMG5-201ENST00000361813 RPL37P61927 97 aaKnown RBP10.17□□□□□ -0.78
SMG5-201ENST00000361813 ROMO1P60602 79 aa10.13□□□□□ -0.79
SMG5-201ENST00000361813 KRTAP13-2Q52LG2 175 aa10.12□□□□□ -0.79
SMG5-201ENST00000361813 S4R3F8 94 aa10.11□□□□□ -0.79
SMG5-201ENST00000361813 FBN1P35555 2871 aaKnown RBP10.09□□□□□ -0.79
SMG5-201ENST00000361813 COX6B2Q6YFQ2 88 aa10.08□□□□□ -0.8
SMG5-201ENST00000361813 Q6ZSA8 131 aa10.06□□□□□ -0.8
SMG5-201ENST00000361813 KRTAP25-1Q3LHN0 102 aa10.04□□□□□ -0.8
SMG5-201ENST00000361813 TGP01266 2768 aa10.02□□□□□ -0.81
SMG5-201ENST00000361813 LUZP6Q538Z0 58 aa9.99□□□□□ -0.81
SMG5-201ENST00000361813 PKD1L1Q8TDX9 2849 aa9.99□□□□□ -0.81
SMG5-201ENST00000361813 J3QL48 77 aa9.95□□□□□ -0.82
SMG5-201ENST00000361813 CAMK2N1Q7Z7J9 78 aa9.93□□□□□ -0.82
SMG5-201ENST00000361813 R4GN34 69 aa9.88□□□□□ -0.83
SMG5-201ENST00000361813 OTOGQ6ZRI0 2925 aa9.84□□□□□ -0.83
SMG5-201ENST00000361813 CSMD2Q7Z408 3487 aa9.84□□□□□ -0.83
SMG5-201ENST00000361813 TENM2Q9NT68 2774 aa9.83□□□□□ -0.84
SMG5-201ENST00000361813 RPS29P62273 56 aaKnown RBP9.78□□□□□ -0.84
SMG5-201ENST00000361813 M0QZ58 72 aa9.77□□□□□ -0.85
SMG5-201ENST00000361813 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
SMG5-201ENST00000361813 A8MUU9 505 aa9.76□□□□□ -0.85
SMG5-201ENST00000361813 NBPF19A0A087WUL8 3843 aa9.74□□□□□ -0.85
SMG5-201ENST00000361813 Q5VSD8 79 aa9.73□□□□□ -0.85
SMG5-201ENST00000361813 H0YAA0 97 aa9.71□□□□□ -0.86
SMG5-201ENST00000361813 NDUFAF8A1L188 74 aa9.69□□□□□ -0.86
SMG5-201ENST00000361813 KRTAP1-4P0C5Y4 121 aa9.69□□□□□ -0.86
SMG5-201ENST00000361813 KRTAP16-1A8MUX0 517 aa9.67□□□□□ -0.86
SMG5-201ENST00000361813 KRTAP13-3Q3SY46 172 aa9.66□□□□□ -0.86
SMG5-201ENST00000361813 BSNQ9UPA5 3926 aa9.66□□□□□ -0.86
SMG5-201ENST00000361813 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
SMG5-201ENST00000361813 ZFHX3Q15911 3703 aa9.63□□□□□ -0.87
SMG5-201ENST00000361813 A0A0A0MQY5 61 aa9.6□□□□□ -0.87
SMG5-201ENST00000361813 FBN3Q75N90 2809 aa9.56□□□□□ -0.88
SMG5-201ENST00000361813 C10orf95Q9H7T3 257 aa9.55□□□□□ -0.88
SMG5-201ENST00000361813 TRRAPQ9Y4A5 3859 aa9.52□□□□□ -0.89
SMG5-201ENST00000361813 SEC61BP60468 96 aaKnown RBP9.5□□□□□ -0.89
SMG5-201ENST00000361813 VPS13CQ709C8 3753 aa9.42□□□□□ -0.9
SMG5-201ENST00000361813 M0R2T5 61 aa9.39□□□□□ -0.91
SMG5-201ENST00000361813 MEGF8Q7Z7M0 2845 aa9.34□□□□□ -0.91
SMG5-201ENST00000361813 ANK3Q12955 4377 aaKnown RBP9.3□□□□□ -0.92
SMG5-201ENST00000361813 P0C880 135 aa9.27□□□□□ -0.92
SMG5-201ENST00000361813 XP32Q5T750 250 aa9.26□□□□□ -0.93
SMG5-201ENST00000361813 COL7A1Q02388 2944 aa9.22□□□□□ -0.93
SMG5-201ENST00000361813 PLAC4Q8WY50 150 aa9.19□□□□□ -0.94
SMG5-201ENST00000361813 KRTAP3-1Q9BYR8 98 aa9.13□□□□□ -0.95
SMG5-201ENST00000361813 CSMD3Q7Z407 3707 aa9.03□□□□□ -0.96
SMG5-201ENST00000361813 KRTAP10-8P60410 259 aa9.02□□□□□ -0.97
SMG5-201ENST00000361813 TPRXLQ17RH7 258 aa9□□□□□ -0.97
SMG5-201ENST00000361813 TNP1P09430 55 aa9□□□□□ -0.97
SMG5-201ENST00000361813 KRTAP12-2P59991 146 aa9□□□□□ -0.97
SMG5-201ENST00000361813 ZNF469Q96JG9 3925 aaPredicted RBP8.98□□□□□ -0.97
SMG5-201ENST00000361813 PP632Q6XCG6 107 aa8.92□□□□□ -0.98
SMG5-201ENST00000361813 KRTAP13-4Q3LI77 160 aa8.89□□□□□ -0.99
SMG5-201ENST00000361813 KRTAP12-1P59990 96 aa8.85□□□□□ -0.99
SMG5-201ENST00000361813 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
SMG5-201ENST00000361813 AKAP9Q99996 3911 aa8.82□□□□□ -1
SMG5-201ENST00000361813 A0A1B0GVY2 172 aa8.77□□□□□ -1.01
SMG5-201ENST00000361813 HUWE1Q7Z6Z7 4374 aaKnown RBP8.69□□□□□ -1.02
SMG5-201ENST00000361813 KRTAP21-3Q3LHN1 58 aa8.69□□□□□ -1.02
SMG5-201ENST00000361813 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
SMG5-201ENST00000361813 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
SMG5-201ENST00000361813 KRTAP15-1Q3LI76 137 aa8.49□□□□□ -1.05
SMG5-201ENST00000361813 DNAH10Q8IVF4 4471 aa8.41□□□□□ -1.06
SMG5-201ENST00000361813 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
SMG5-201ENST00000361813 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
SMG5-201ENST00000361813 PLECQ15149 4684 aaKnown RBP8.29□□□□□ -1.08
SMG5-201ENST00000361813 DNAH9Q9NYC9 4486 aa8.28□□□□□ -1.08
SMG5-201ENST00000361813 DNAH11Q96DT5 4516 aa8.26□□□□□ -1.09
SMG5-201ENST00000361813 DNAH1Q9P2D7 4330 aa8.25□□□□□ -1.09
SMG5-201ENST00000361813 MT1HL1P0DM35 61 aa8.21□□□□□ -1.1
SMG5-201ENST00000361813 DNAH5Q8TE73 4624 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms