RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 SPTBN5Q9NRC6 3674 aaKnown RBP5.83□□□□□ -1.48
SPTAN1-201ENST00000358161 ADGRG4Q8IZF6 3080 aa5.83□□□□□ -1.48
SPTAN1-201ENST00000358161 CRYBG3Q68DQ2 2970 aa5.79□□□□□ -1.48
SPTAN1-201ENST00000358161 EYSQ5T1H1 3165 aa5.79□□□□□ -1.48
SPTAN1-201ENST00000358161 NBEAQ8NFP9 2946 aa5.78□□□□□ -1.48
SPTAN1-201ENST00000358161 ZZEF1O43149 2961 aa5.78□□□□□ -1.48
SPTAN1-201ENST00000358161 SPATA8Q6RVD6 105 aa5.77□□□□□ -1.49
SPTAN1-201ENST00000358161 A8MUU9 505 aa5.75□□□□□ -1.49
SPTAN1-201ENST00000358161 PRAC1Q96KF2 57 aa5.75□□□□□ -1.49
SPTAN1-201ENST00000358161 NIPBLQ6KC79 2804 aaeCLIP5.75□□□□□ -1.49
SPTAN1-201ENST00000358161 FREM2Q5SZK8 3169 aa5.74□□□□□ -1.49
SPTAN1-201ENST00000358161 TENM4Q6N022 2769 aa5.73□□□□□ -1.49
SPTAN1-201ENST00000358161 C20orf166-AS1Q96NR2 134 aa5.73□□□□□ -1.49
SPTAN1-201ENST00000358161 DMXL1Q9Y485 3027 aa5.71□□□□□ -1.5
SPTAN1-201ENST00000358161 REV3LO60673 3130 aa5.71□□□□□ -1.5
SPTAN1-201ENST00000358161 CELSR2Q9HCU4 2923 aa5.68□□□□□ -1.5
SPTAN1-201ENST00000358161 ASH1LQ9NR48 2969 aaKnown RBP5.67□□□□□ -1.5
SPTAN1-201ENST00000358161 CFAP47Q6ZTR5 3102 aa5.65□□□□□ -1.5
SPTAN1-201ENST00000358161 HRNRQ86YZ3 2850 aaPredicted RBP5.65□□□□□ -1.5
SPTAN1-201ENST00000358161 ZANQ9Y493 2812 aa5.64□□□□□ -1.51
SPTAN1-201ENST00000358161 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
SPTAN1-201ENST00000358161 KRTAP1-4P0C5Y4 121 aa5.63□□□□□ -1.51
SPTAN1-201ENST00000358161 SPEGQ15772 3267 aa5.62□□□□□ -1.51
SPTAN1-201ENST00000358161 DCHS2Q6V1P9 2916 aa5.62□□□□□ -1.51
SPTAN1-201ENST00000358161 XP32Q5T750 250 aa5.59□□□□□ -1.51
SPTAN1-201ENST00000358161 A8MU10 97 aa5.57□□□□□ -1.52
SPTAN1-201ENST00000358161 TPRXLQ17RH7 258 aa5.57□□□□□ -1.52
SPTAN1-201ENST00000358161 NF1P21359 2839 aa5.55□□□□□ -1.52
SPTAN1-201ENST00000358161 TNP1P09430 55 aa5.52□□□□□ -1.53
SPTAN1-201ENST00000358161 LOC400499M0QZD8 3231 aa5.52□□□□□ -1.53
SPTAN1-201ENST00000358161 TENM1Q9UKZ4 2725 aa5.51□□□□□ -1.53
SPTAN1-201ENST00000358161 FBN2P35556 2912 aa5.5□□□□□ -1.53
SPTAN1-201ENST00000358161 KRTAP25-1Q3LHN0 102 aa5.49□□□□□ -1.53
SPTAN1-201ENST00000358161 A6NN06 94 aa5.46□□□□□ -1.53
SPTAN1-201ENST00000358161 CELSR1Q9NYQ6 3014 aa5.46□□□□□ -1.54
SPTAN1-201ENST00000358161 A0A1B0GVY2 172 aa5.44□□□□□ -1.54
SPTAN1-201ENST00000358161 KRTAP13-3Q3SY46 172 aa5.43□□□□□ -1.54
SPTAN1-201ENST00000358161 MXRA5Q9NR99 2828 aa5.42□□□□□ -1.54
SPTAN1-201ENST00000358161 H3BS24 57 aa5.41□□□□□ -1.54
SPTAN1-201ENST00000358161 KRTAP16-1A8MUX0 517 aa5.41□□□□□ -1.54
SPTAN1-201ENST00000358161 TENM3Q9P273 2699 aa5.4□□□□□ -1.55
SPTAN1-201ENST00000358161 MYO15AQ9UKN7 3530 aa5.4□□□□□ -1.55
SPTAN1-201ENST00000358161 TENM2Q9NT68 2774 aa5.39□□□□□ -1.55
SPTAN1-201ENST00000358161 KRTAP10-8P60410 259 aa5.38□□□□□ -1.55
SPTAN1-201ENST00000358161 NBPF19A0A087WUL8 3843 aa5.38□□□□□ -1.55
SPTAN1-201ENST00000358161 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
SPTAN1-201ENST00000358161 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
SPTAN1-201ENST00000358161 PRO2289Q9P1D8 64 aa5.33□□□□□ -1.56
SPTAN1-201ENST00000358161 PDZD2O15018 2839 aa5.32□□□□□ -1.56
SPTAN1-201ENST00000358161 WDFY3Q8IZQ1 3526 aa5.31□□□□□ -1.56
SPTAN1-201ENST00000358161 RELNP78509 3460 aa5.3□□□□□ -1.56
SPTAN1-201ENST00000358161 ASPMQ8IZT6 3477 aa5.3□□□□□ -1.56
SPTAN1-201ENST00000358161 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
SPTAN1-201ENST00000358161 H0YAA0 97 aa5.25□□□□□ -1.57
SPTAN1-201ENST00000358161 PKD1L1Q8TDX9 2849 aa5.23□□□□□ -1.57
SPTAN1-201ENST00000358161 TGP01266 2768 aa5.22□□□□□ -1.57
SPTAN1-201ENST00000358161 DCHS1Q96JQ0 3298 aa5.22□□□□□ -1.57
SPTAN1-201ENST00000358161 LAMA5O15230 3695 aa5.21□□□□□ -1.58
SPTAN1-201ENST00000358161 P0C880 135 aa5.19□□□□□ -1.58
SPTAN1-201ENST00000358161 NDUFAF8A1L188 74 aa5.17□□□□□ -1.58
SPTAN1-201ENST00000358161 VWFP04275 2813 aa5.15□□□□□ -1.59
SPTAN1-201ENST00000358161 OTOGQ6ZRI0 2925 aa5.13□□□□□ -1.59
SPTAN1-201ENST00000358161 ZFHX3Q15911 3703 aa5.13□□□□□ -1.59
SPTAN1-201ENST00000358161 ZFHX4Q86UP3 3567 aa5.11□□□□□ -1.59
SPTAN1-201ENST00000358161 DMDP11532 3685 aa5.11□□□□□ -1.59
SPTAN1-201ENST00000358161 ANK3Q12955 4377 aaKnown RBP5.08□□□□□ -1.6
SPTAN1-201ENST00000358161 FBN1P35555 2871 aaKnown RBP5.03□□□□□ -1.6
SPTAN1-201ENST00000358161 CSMD1Q96PZ7 3565 aa5.01□□□□□ -1.61
SPTAN1-201ENST00000358161 SPENQ96T58 3664 aaKnown RBP4.98□□□□□ -1.61
SPTAN1-201ENST00000358161 SMG1Q96Q15 3661 aaKnown RBP4.98□□□□□ -1.61
SPTAN1-201ENST00000358161 KRTAP12-2P59991 146 aa4.97□□□□□ -1.61
SPTAN1-201ENST00000358161 MUC3AQ02505 3323 aa4.96□□□□□ -1.62
SPTAN1-201ENST00000358161 KRTAP13-4Q3LI77 160 aa4.95□□□□□ -1.62
SPTAN1-201ENST00000358161 TRRAPQ9Y4A5 3859 aa4.94□□□□□ -1.62
SPTAN1-201ENST00000358161 BSNQ9UPA5 3926 aa4.93□□□□□ -1.62
SPTAN1-201ENST00000358161 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
SPTAN1-201ENST00000358161 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
SPTAN1-201ENST00000358161 MT1HL1P0DM35 61 aa4.9□□□□□ -1.62
SPTAN1-201ENST00000358161 FBN3Q75N90 2809 aa4.89□□□□□ -1.63
SPTAN1-201ENST00000358161 CSMD2Q7Z408 3487 aa4.85□□□□□ -1.63
SPTAN1-201ENST00000358161 MEGF8Q7Z7M0 2845 aa4.84□□□□□ -1.63
SPTAN1-201ENST00000358161 SVEP1Q4LDE5 3571 aa4.84□□□□□ -1.63
SPTAN1-201ENST00000358161 ALMS1Q8TCU4 4167 aa4.83□□□□□ -1.64
SPTAN1-201ENST00000358161 COL7A1Q02388 2944 aa4.82□□□□□ -1.64
SPTAN1-201ENST00000358161 HUWE1Q7Z6Z7 4374 aaKnown RBP4.81□□□□□ -1.64
SPTAN1-201ENST00000358161 SRRM2Q9UQ35 2752 aaKnown RBP4.8□□□□□ -1.64
SPTAN1-201ENST00000358161 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
SPTAN1-201ENST00000358161 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
SPTAN1-201ENST00000358161 KRTAP4-5Q9BYR2 181 aa4.74□□□□□ -1.65
SPTAN1-201ENST00000358161 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
SPTAN1-201ENST00000358161 VPS13CQ709C8 3753 aa4.72□□□□□ -1.65
SPTAN1-201ENST00000358161 KRTAP3-3Q9BYR6 98 aa4.64□□□□□ -1.67
SPTAN1-201ENST00000358161 AKAP9Q99996 3911 aa4.64□□□□□ -1.67
SPTAN1-201ENST00000358161 CUBNO60494 3623 aa4.63□□□□□ -1.67
SPTAN1-201ENST00000358161 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
SPTAN1-201ENST00000358161 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
SPTAN1-201ENST00000358161 ZNF469Q96JG9 3925 aaPredicted RBP4.55□□□□□ -1.68
SPTAN1-201ENST00000358161 DNAH9Q9NYC9 4486 aa4.55□□□□□ -1.68
SPTAN1-201ENST00000358161 DNAH1Q9P2D7 4330 aa4.53□□□□□ -1.68
SPTAN1-201ENST00000358161 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms