RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 PSORS1C2Q9UIG4 136 aa4.18□□□□□ -1.74
VPS13A-201ENST00000355766 ERC2-IT1O76042 136 aa4.17□□□□□ -1.74
VPS13A-201ENST00000355766 SCGB1A1P11684 91 aa4.17□□□□□ -1.74
VPS13A-201ENST00000355766 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
VPS13A-201ENST00000355766 SIGMAR1Q99720 223 aa4.17□□□□□ -1.74
VPS13A-201ENST00000355766 IGLV7-43P04211 117 aa4.16□□□□□ -1.74
VPS13A-201ENST00000355766 C1orf137Q5JT78 98 aa4.16□□□□□ -1.74
VPS13A-201ENST00000355766 Q6Q795 121 aa4.16□□□□□ -1.74
VPS13A-201ENST00000355766 SMIM29Q86T20 159 aa4.16□□□□□ -1.74
VPS13A-201ENST00000355766 Q8NBF4 154 aa4.16□□□□□ -1.74
VPS13A-201ENST00000355766 SPRR4Q96PI1 79 aa4.16□□□□□ -1.74
VPS13A-201ENST00000355766 UBL5Q9BZL1 73 aa4.16□□□□□ -1.74
VPS13A-201ENST00000355766 TRBV7-7A0A0K0K1E9 115 aa4.15□□□□□ -1.75
VPS13A-201ENST00000355766 ST20-AS1Q8NBB2 130 aa4.15□□□□□ -1.75
VPS13A-201ENST00000355766 CRYGAP11844 174 aa4.14□□□□□ -1.75
VPS13A-201ENST00000355766 DEFB105AQ8NG35 78 aa4.14□□□□□ -1.75
VPS13A-201ENST00000355766 LINC00846Q9NV44 126 aa4.14□□□□□ -1.75
VPS13A-201ENST00000355766 CXCL6P80162 114 aa4.13□□□□□ -1.75
VPS13A-201ENST00000355766 FAM229BQ4G0N7 80 aa4.13□□□□□ -1.75
VPS13A-201ENST00000355766 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
VPS13A-201ENST00000355766 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
VPS13A-201ENST00000355766 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
VPS13A-201ENST00000355766 IGFL1Q6UW32 110 aa4.11□□□□□ -1.75
VPS13A-201ENST00000355766 SPINK6Q6UWN8 80 aa4.11□□□□□ -1.75
VPS13A-201ENST00000355766 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
VPS13A-201ENST00000355766 MT-ATP8P03928 68 aa4.1□□□□□ -1.75
VPS13A-201ENST00000355766 CD164Q04900 197 aa4.1□□□□□ -1.75
VPS13A-201ENST00000355766 Q6ZVQ6 151 aa4.1□□□□□ -1.75
VPS13A-201ENST00000355766 C3orf22Q8N5N4 141 aa4.1□□□□□ -1.75
VPS13A-201ENST00000355766 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
VPS13A-201ENST00000355766 A0A1B0GV72 72 aa4.09□□□□□ -1.75
VPS13A-201ENST00000355766 A0A1W2PNM2 257 aa4.09□□□□□ -1.75
VPS13A-201ENST00000355766 SS18L2Q9UHA2 77 aa4.09□□□□□ -1.75
VPS13A-201ENST00000355766 NREPQ16612 68 aa4.08□□□□□ -1.76
VPS13A-201ENST00000355766 SSBP3-AS1Q7Z2R9 100 aa4.08□□□□□ -1.76
VPS13A-201ENST00000355766 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
VPS13A-201ENST00000355766 J3KT08 172 aa4.06□□□□□ -1.76
VPS13A-201ENST00000355766 C9orf153Q5TBE3 101 aa4.06□□□□□ -1.76
VPS13A-201ENST00000355766 Q5XG85 94 aa4.06□□□□□ -1.76
VPS13A-201ENST00000355766 BPY2O14599 106 aa4.05□□□□□ -1.76
VPS13A-201ENST00000355766 PCP4P48539 62 aa4.05□□□□□ -1.76
VPS13A-201ENST00000355766 HIST1H4AP62805 103 aaKnown RBP4.05□□□□□ -1.76
VPS13A-201ENST00000355766 A0A087WSZ3 146 aa4.04□□□□□ -1.76
VPS13A-201ENST00000355766 KRTAP1-4P0C5Y4 121 aa4.04□□□□□ -1.76
VPS13A-201ENST00000355766 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
VPS13A-201ENST00000355766 MOBPQ13875 183 aa4.04□□□□□ -1.76
VPS13A-201ENST00000355766 PRR4Q16378 134 aa4.04□□□□□ -1.76
VPS13A-201ENST00000355766 ASB16-AS1Q495Z4 193 aa4.04□□□□□ -1.76
VPS13A-201ENST00000355766 IGLV9-49A0A0B4J1Y8 123 aa4.03□□□□□ -1.76
VPS13A-201ENST00000355766 ATOX1O00244 68 aa4.02□□□□□ -1.77
VPS13A-201ENST00000355766 SMIM20Q8N5G0 67 aa4.02□□□□□ -1.77
VPS13A-201ENST00000355766 IGKV3D-7A0A0C4DH55 119 aa4.01□□□□□ -1.77
VPS13A-201ENST00000355766 FAM236AA0A1B0GUQ0 79 aa4.01□□□□□ -1.77
VPS13A-201ENST00000355766 FAM236BA0A1B0GV22 79 aa4.01□□□□□ -1.77
VPS13A-201ENST00000355766 LIMD2Q9BT23 127 aa4.01□□□□□ -1.77
VPS13A-201ENST00000355766 LINC00472Q9H8W2 130 aa4.01□□□□□ -1.77
VPS13A-201ENST00000355766 A8MWP4 228 aa4□□□□□ -1.77
VPS13A-201ENST00000355766 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
VPS13A-201ENST00000355766 SPAG11AQ6PDA7 123 aa4□□□□□ -1.77
VPS13A-201ENST00000355766 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
VPS13A-201ENST00000355766 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
VPS13A-201ENST00000355766 A0A087X002 238 aa3.99□□□□□ -1.77
VPS13A-201ENST00000355766 SPINK1P00995 79 aa3.99□□□□□ -1.77
VPS13A-201ENST00000355766 IGKV4-1P06312 121 aa3.99□□□□□ -1.77
VPS13A-201ENST00000355766 DSCR10P59022 87 aa3.99□□□□□ -1.77
VPS13A-201ENST00000355766 NDUFB1O75438 58 aa3.98□□□□□ -1.77
VPS13A-201ENST00000355766 KRTAP13-2Q52LG2 175 aa3.98□□□□□ -1.77
VPS13A-201ENST00000355766 ANAPC13Q9BS18 74 aa3.98□□□□□ -1.77
VPS13A-201ENST00000355766 PRR15Q8IV56 129 aa3.97□□□□□ -1.77
VPS13A-201ENST00000355766 ANAPC11Q9NYG5 84 aa3.97□□□□□ -1.77
VPS13A-201ENST00000355766 A0A0G2JQZ4 141 aa3.96□□□□□ -1.78
VPS13A-201ENST00000355766 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
VPS13A-201ENST00000355766 Q96NJ1 140 aa3.96□□□□□ -1.78
VPS13A-201ENST00000355766 A0A087WVE0 104 aa3.95□□□□□ -1.78
VPS13A-201ENST00000355766 HCG22E2RYF7 251 aa3.95□□□□□ -1.78
VPS13A-201ENST00000355766 K7EQZ3 153 aa3.95□□□□□ -1.78
VPS13A-201ENST00000355766 SERP2Q8N6R1 65 aa3.95□□□□□ -1.78
VPS13A-201ENST00000355766 LINC00304Q8N9R0 145 aa3.95□□□□□ -1.78
VPS13A-201ENST00000355766 UQCRQO14949 82 aa3.94□□□□□ -1.78
VPS13A-201ENST00000355766 TRAV7A0A075B6U4 112 aa3.93□□□□□ -1.78
VPS13A-201ENST00000355766 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
VPS13A-201ENST00000355766 C8orf87E5RJ46 101 aa3.93□□□□□ -1.78
VPS13A-201ENST00000355766 COX7CP15954 63 aa3.92□□□□□ -1.78
VPS13A-201ENST00000355766 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
VPS13A-201ENST00000355766 Q8N9L7 120 aa3.92□□□□□ -1.78
VPS13A-201ENST00000355766 HRCT1Q6UXD1 115 aa3.91□□□□□ -1.78
VPS13A-201ENST00000355766 OCR1Q9BZK8 76 aa3.91□□□□□ -1.78
VPS13A-201ENST00000355766 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
VPS13A-201ENST00000355766 C1orf195Q5TG92 126 aa3.9□□□□□ -1.79
VPS13A-201ENST00000355766 CASC2Q6XLA1 102 aa3.9□□□□□ -1.79
VPS13A-201ENST00000355766 TP53AIP1Q9HCN2 124 aa3.9□□□□□ -1.79
VPS13A-201ENST00000355766 TPRXLQ17RH7 258 aa3.89□□□□□ -1.79
VPS13A-201ENST00000355766 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
VPS13A-201ENST00000355766 TMEM254Q8TBM7 123 aa3.89□□□□□ -1.79
VPS13A-201ENST00000355766 C8orf17Q9NRJ1 99 aa3.89□□□□□ -1.79
VPS13A-201ENST00000355766 hDV103S1A0JD37 113 aa3.88□□□□□ -1.79
VPS13A-201ENST00000355766 H3BPC8 53 aa3.88□□□□□ -1.79
VPS13A-201ENST00000355766 KLKP1Q107X0 134 aa3.88□□□□□ -1.79
VPS13A-201ENST00000355766 NDUFC1O43677 76 aa3.87□□□□□ -1.79
VPS13A-201ENST00000355766 DEFB116Q30KQ4 102 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms