RNA–Protein interactions for RNA: ENST00000354209.7

PRKAA1-202, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-202ENST00000354209 IGHV6-1A0A0B4J1U7 121 aa12.27□□□□□ -0.45
PRKAA1-202ENST00000354209 SMIM20Q8N5G0 67 aa12.27□□□□□ -0.45
PRKAA1-202ENST00000354209 C8orf17Q9NRJ1 99 aa12.26□□□□□ -0.45
PRKAA1-202ENST00000354209 LRP1Q07954 4544 aaKnown RBP12.26□□□□□ -0.45
PRKAA1-202ENST00000354209 CASC2Q6XLA1 102 aa12.25□□□□□ -0.45
PRKAA1-202ENST00000354209 COX7CP15954 63 aa12.24□□□□□ -0.45
PRKAA1-202ENST00000354209 TRAV7A0A075B6U4 112 aa12.23□□□□□ -0.45
PRKAA1-202ENST00000354209 OCR1Q9BZK8 76 aa12.23□□□□□ -0.45
PRKAA1-202ENST00000354209 FAT3Q8TDW7 4589 aa12.21□□□□□ -0.46
PRKAA1-202ENST00000354209 TNXBP22105 4242 aa12.2□□□□□ -0.46
PRKAA1-202ENST00000354209 hDV103S1A0JD37 113 aa12.2□□□□□ -0.46
PRKAA1-202ENST00000354209 NOTCH2NLQ7Z3S9 236 aa12.2□□□□□ -0.46
PRKAA1-202ENST00000354209 CCDC179H3BU77 68 aa12.19□□□□□ -0.46
PRKAA1-202ENST00000354209 UQCRQO14949 82 aa12.19□□□□□ -0.46
PRKAA1-202ENST00000354209 C8orf87E5RJ46 101 aa12.17□□□□□ -0.46
PRKAA1-202ENST00000354209 KRTAP4-5Q9BYR2 181 aa12.15□□□□□ -0.46
PRKAA1-202ENST00000354209 MT1HL1P0DM35 61 aa12.13□□□□□ -0.47
PRKAA1-202ENST00000354209 TMEM254Q8TBM7 123 aa12.13□□□□□ -0.47
PRKAA1-202ENST00000354209 FLG2Q5D862 2391 aaPredicted RBP12.12□□□□□ -0.47
PRKAA1-202ENST00000354209 BIRC6Q9NR09 4857 aa12.12□□□□□ -0.47
PRKAA1-202ENST00000354209 MRPL34Q9BQ48 92 aaKnown RBP12.11□□□□□ -0.47
PRKAA1-202ENST00000354209 MYCBP2O75592 4640 aa12.1□□□□□ -0.47
PRKAA1-202ENST00000354209 LINC00313P59037 77 aa12.09□□□□□ -0.47
PRKAA1-202ENST00000354209 OXTP01178 125 aa12.06□□□□□ -0.48
PRKAA1-202ENST00000354209 RETNLBQ9BQ08 111 aa12.04□□□□□ -0.48
PRKAA1-202ENST00000354209 C20orf197Q8N268 126 aa12.03□□□□□ -0.48
PRKAA1-202ENST00000354209 KRTAP16-1A8MUX0 517 aa12.02□□□□□ -0.49
PRKAA1-202ENST00000354209 HERC2O95714 4834 aa12□□□□□ -0.49
PRKAA1-202ENST00000354209 TP53AIP1Q9HCN2 124 aa11.99□□□□□ -0.49
PRKAA1-202ENST00000354209 NDUFS5O43920 106 aa11.98□□□□□ -0.49
PRKAA1-202ENST00000354209 C5orf47Q569G3 176 aa11.98□□□□□ -0.49
PRKAA1-202ENST00000354209 KLKP1Q107X0 134 aa11.98□□□□□ -0.49
PRKAA1-202ENST00000354209 Q8N9P0 234 aaPredicted RBP11.97□□□□□ -0.49
PRKAA1-202ENST00000354209 CYSTM1Q9H1C7 97 aa11.97□□□□□ -0.49
PRKAA1-202ENST00000354209 A0A0U1RQV1 116 aa11.95□□□□□ -0.5
PRKAA1-202ENST00000354209 SNURFQ9Y675 71 aa11.94□□□□□ -0.5
PRKAA1-202ENST00000354209 TRAV22A0A0B4J277 110 aa11.92□□□□□ -0.5
PRKAA1-202ENST00000354209 H0Y9P7 68 aa11.9□□□□□ -0.5
PRKAA1-202ENST00000354209 FP248Q71RG6 208 aaPredicted RBP11.9□□□□□ -0.5
PRKAA1-202ENST00000354209 ABCA13Q86UQ4 5058 aa11.9□□□□□ -0.5
PRKAA1-202ENST00000354209 DMBT1Q9UGM3 2413 aaPredicted RBP11.89□□□□□ -0.51
PRKAA1-202ENST00000354209 MP68P56378 58 aa11.89□□□□□ -0.51
PRKAA1-202ENST00000354209 ZCCHC13Q8WW36 166 aaKnown RBP11.88□□□□□ -0.51
PRKAA1-202ENST00000354209 C9orf92A6NGG3 77 aa11.86□□□□□ -0.51
PRKAA1-202ENST00000354209 H3BPC8 53 aa11.85□□□□□ -0.51
PRKAA1-202ENST00000354209 KRTAP13-3Q3SY46 172 aa11.84□□□□□ -0.51
PRKAA1-202ENST00000354209 Q5W150 140 aa11.83□□□□□ -0.52
PRKAA1-202ENST00000354209 LINC00208Q96KT6 92 aa11.83□□□□□ -0.52
PRKAA1-202ENST00000354209 H7BZZ5 65 aa11.82□□□□□ -0.52
PRKAA1-202ENST00000354209 NDUFC1O43677 76 aa11.8□□□□□ -0.52
PRKAA1-202ENST00000354209 C20orf166-AS1Q96NR2 134 aa11.78□□□□□ -0.52
PRKAA1-202ENST00000354209 IGLV7-46A0A075B6I9 117 aa11.78□□□□□ -0.52
PRKAA1-202ENST00000354209 C1orf64Q8NEQ6 169 aa11.78□□□□□ -0.52
PRKAA1-202ENST00000354209 A8MUU9 505 aa11.76□□□□□ -0.53
PRKAA1-202ENST00000354209 TMEM258P61165 79 aa11.74□□□□□ -0.53
PRKAA1-202ENST00000354209 J3QL48 77 aa11.7□□□□□ -0.54
PRKAA1-202ENST00000354209 PRR4Q16378 134 aa11.69□□□□□ -0.54
PRKAA1-202ENST00000354209 LOC101927531A0A1B0GV80 90 aa11.68□□□□□ -0.54
PRKAA1-202ENST00000354209 Q75L30 129 aa11.67□□□□□ -0.54
PRKAA1-202ENST00000354209 XP32Q5T750 250 aa11.62□□□□□ -0.55
PRKAA1-202ENST00000354209 FAM236DA0A1B0GTK5 79 aa11.61□□□□□ -0.55
PRKAA1-202ENST00000354209 IGKV2-30P06310 120 aa11.61□□□□□ -0.55
PRKAA1-202ENST00000354209 FAM236CP0DP71 79 aa11.61□□□□□ -0.55
PRKAA1-202ENST00000354209 CYP4F30PQ9H0H9 118 aa11.6□□□□□ -0.55
PRKAA1-202ENST00000354209 TPRXLQ17RH7 258 aa11.6□□□□□ -0.55
PRKAA1-202ENST00000354209 PCOTHQ58A44 107 aa11.58□□□□□ -0.56
PRKAA1-202ENST00000354209 ATP5EP56381 51 aaPredicted RBP11.55□□□□□ -0.56
PRKAA1-202ENST00000354209 RPL37P61927 97 aaKnown RBP11.55□□□□□ -0.56
PRKAA1-202ENST00000354209 SPANXA2-OT1Q8N9U9 137 aa11.53□□□□□ -0.56
PRKAA1-202ENST00000354209 IGKV2D-30A0A075B6S6 120 aa11.51□□□□□ -0.57
PRKAA1-202ENST00000354209 C7orf65Q6ZTY9 151 aa11.48□□□□□ -0.57
PRKAA1-202ENST00000354209 PCLOQ9Y6V0 5065 aa11.47□□□□□ -0.57
PRKAA1-202ENST00000354209 ATP11AUNQ6ZP68 121 aa11.46□□□□□ -0.58
PRKAA1-202ENST00000354209 HRES1P13985 223 aa11.42□□□□□ -0.58
PRKAA1-202ENST00000354209 LPAP08519 4548 aa11.38□□□□□ -0.59
PRKAA1-202ENST00000354209 SPINK7P58062 85 aa11.37□□□□□ -0.59
PRKAA1-202ENST00000354209 SERP1Q9Y6X1 66 aa11.36□□□□□ -0.59
PRKAA1-202ENST00000354209 RPS28P62857 69 aaKnown RBP11.34□□□□□ -0.59
PRKAA1-202ENST00000354209 LRP2P98164 4655 aa11.32□□□□□ -0.6
PRKAA1-202ENST00000354209 DMAC1Q96GE9 116 aa11.27□□□□□ -0.61
PRKAA1-202ENST00000354209 C4orf26Q17RF5 130 aa11.22□□□□□ -0.61
PRKAA1-202ENST00000354209 HERC1Q15751 4861 aa11.21□□□□□ -0.61
PRKAA1-202ENST00000354209 COA5Q86WW8 74 aa11.18□□□□□ -0.62
PRKAA1-202ENST00000354209 ACYP2P14621 99 aa11.17□□□□□ -0.62
PRKAA1-202ENST00000354209 SEC61BP60468 96 aaKnown RBP11.16□□□□□ -0.62
PRKAA1-202ENST00000354209 A8MUN3 132 aa11.13□□□□□ -0.63
PRKAA1-202ENST00000354209 HMCN2Q8NDA2 5059 aa11.12□□□□□ -0.63
PRKAA1-202ENST00000354209 KRTAP3-1Q9BYR8 98 aa11.1□□□□□ -0.63
PRKAA1-202ENST00000354209 COX6B2Q6YFQ2 88 aa11.09□□□□□ -0.63
PRKAA1-202ENST00000354209 SMIM26A0A096LP01 95 aa11.05□□□□□ -0.64
PRKAA1-202ENST00000354209 MUC17Q685J3 4493 aa11.01□□□□□ -0.65
PRKAA1-202ENST00000354209 MPLKIPQ8TAP9 179 aa11.01□□□□□ -0.65
PRKAA1-202ENST00000354209 CHKB-CPT1BH3BT56 60 aa10.97□□□□□ -0.65
PRKAA1-202ENST00000354209 KRTAP4-1Q9BYQ7 146 aa10.97□□□□□ -0.65
PRKAA1-202ENST00000354209 RBM12B-AS1Q9P1G2 102 aa10.89□□□□□ -0.67
PRKAA1-202ENST00000354209 Q1T7F1 81 aa10.86□□□□□ -0.67
PRKAA1-202ENST00000354209 H1FX-AS1Q4G0G2 97 aa10.81□□□□□ -0.68
PRKAA1-202ENST00000354209 V9GYY9 64 aa10.79□□□□□ -0.68
PRKAA1-202ENST00000354209 SPTSSBQ8NFR3 76 aa10.75□□□□□ -0.69
PRKAA1-202ENST00000354209 LINC01558Q9Y6Z2 57 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms