RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 COL6A5A8TX70 2615 aa6.24□□□□□ -1.41
CDK5RAP2-201ENST00000349780 IGSF10Q6WRI0 2623 aa6.24□□□□□ -1.41
CDK5RAP2-201ENST00000349780 FRYLO94915 3013 aa6.23□□□□□ -1.41
CDK5RAP2-201ENST00000349780 TNP1P09430 55 aa6.22□□□□□ -1.41
CDK5RAP2-201ENST00000349780 LRBAP50851 2863 aa6.21□□□□□ -1.41
CDK5RAP2-201ENST00000349780 COL6A3P12111 3177 aa6.19□□□□□ -1.42
CDK5RAP2-201ENST00000349780 STAB2Q8WWQ8 2551 aa6.17□□□□□ -1.42
CDK5RAP2-201ENST00000349780 TACC2O95359 2948 aa6.17□□□□□ -1.42
CDK5RAP2-201ENST00000349780 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
CDK5RAP2-201ENST00000349780 APCP25054 2843 aa6.16□□□□□ -1.42
CDK5RAP2-201ENST00000349780 ASH1LQ9NR48 2969 aaKnown RBP6.15□□□□□ -1.43
CDK5RAP2-201ENST00000349780 ADGRG4Q8IZF6 3080 aa6.13□□□□□ -1.43
CDK5RAP2-201ENST00000349780 KRTAP12-2P59991 146 aa6.12□□□□□ -1.43
CDK5RAP2-201ENST00000349780 NOTCH1P46531 2555 aa6.12□□□□□ -1.43
CDK5RAP2-201ENST00000349780 SPEGQ15772 3267 aa6.11□□□□□ -1.43
CDK5RAP2-201ENST00000349780 UBR5O95071 2799 aaPredicted RBP6.08□□□□□ -1.44
CDK5RAP2-201ENST00000349780 ITPR2Q14571 2701 aa6.06□□□□□ -1.44
CDK5RAP2-201ENST00000349780 TNRC18O15417 2968 aaPredicted RBP6.05□□□□□ -1.44
CDK5RAP2-201ENST00000349780 DCHS1Q96JQ0 3298 aa6.04□□□□□ -1.44
CDK5RAP2-201ENST00000349780 KMT2BQ9UMN6 2715 aaPredicted RBP6.04□□□□□ -1.44
CDK5RAP2-201ENST00000349780 KRTAP1-4P0C5Y4 121 aa6.02□□□□□ -1.45
CDK5RAP2-201ENST00000349780 USP34Q70CQ2 3546 aa6.02□□□□□ -1.45
CDK5RAP2-201ENST00000349780 BOD1L1Q8NFC6 3051 aa6.01□□□□□ -1.45
CDK5RAP2-201ENST00000349780 ZFHX3Q15911 3703 aa6.01□□□□□ -1.45
CDK5RAP2-201ENST00000349780 CFAP47Q6ZTR5 3102 aa5.99□□□□□ -1.45
CDK5RAP2-201ENST00000349780 UTP20O75691 2785 aaKnown RBP5.98□□□□□ -1.45
CDK5RAP2-201ENST00000349780 DMXL2Q8TDJ6 3036 aa5.97□□□□□ -1.45
CDK5RAP2-201ENST00000349780 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
CDK5RAP2-201ENST00000349780 DMXL1Q9Y485 3027 aa5.97□□□□□ -1.45
CDK5RAP2-201ENST00000349780 NSD1Q96L73 2696 aaPredicted RBP5.95□□□□□ -1.46
CDK5RAP2-201ENST00000349780 COL12A1Q99715 3063 aa5.93□□□□□ -1.46
CDK5RAP2-201ENST00000349780 KRTAP3-1Q9BYR8 98 aa5.9□□□□□ -1.46
CDK5RAP2-201ENST00000349780 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.46
CDK5RAP2-201ENST00000349780 MYO15AQ9UKN7 3530 aa5.9□□□□□ -1.46
CDK5RAP2-201ENST00000349780 CSMD1Q96PZ7 3565 aa5.89□□□□□ -1.47
CDK5RAP2-201ENST00000349780 HIVEP1P15822 2718 aa5.89□□□□□ -1.47
CDK5RAP2-201ENST00000349780 ATMQ13315 3056 aa5.89□□□□□ -1.47
CDK5RAP2-201ENST00000349780 XP32Q5T750 250 aa5.87□□□□□ -1.47
CDK5RAP2-201ENST00000349780 SPTBN5Q9NRC6 3674 aaKnown RBP5.86□□□□□ -1.47
CDK5RAP2-201ENST00000349780 WDFY3Q8IZQ1 3526 aa5.85□□□□□ -1.47
CDK5RAP2-201ENST00000349780 TGP01266 2768 aa5.84□□□□□ -1.47
CDK5RAP2-201ENST00000349780 HRNRQ86YZ3 2850 aaPredicted RBP5.83□□□□□ -1.48
CDK5RAP2-201ENST00000349780 ZFHX4Q86UP3 3567 aa5.82□□□□□ -1.48
CDK5RAP2-201ENST00000349780 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
CDK5RAP2-201ENST00000349780 TENM4Q6N022 2769 aa5.78□□□□□ -1.48
CDK5RAP2-201ENST00000349780 FLNCQ14315 2725 aa5.77□□□□□ -1.49
CDK5RAP2-201ENST00000349780 INE1O15225 51 aa5.77□□□□□ -1.49
CDK5RAP2-201ENST00000349780 PRO2289Q9P1D8 64 aa5.76□□□□□ -1.49
CDK5RAP2-201ENST00000349780 LOC400499M0QZD8 3231 aa5.73□□□□□ -1.49
CDK5RAP2-201ENST00000349780 CELSR2Q9HCU4 2923 aa5.72□□□□□ -1.49
CDK5RAP2-201ENST00000349780 CRYBG3Q68DQ2 2970 aa5.69□□□□□ -1.5
CDK5RAP2-201ENST00000349780 EYSQ5T1H1 3165 aa5.69□□□□□ -1.5
CDK5RAP2-201ENST00000349780 FBN2P35556 2912 aa5.68□□□□□ -1.5
CDK5RAP2-201ENST00000349780 SMG1Q96Q15 3661 aaKnown RBP5.65□□□□□ -1.5
CDK5RAP2-201ENST00000349780 ZANQ9Y493 2812 aa5.64□□□□□ -1.51
CDK5RAP2-201ENST00000349780 A0A1B0GVY2 172 aa5.64□□□□□ -1.51
CDK5RAP2-201ENST00000349780 NIPBLQ6KC79 2804 aaeCLIP5.61□□□□□ -1.516e-6■□□□□ 8.4
CDK5RAP2-201ENST00000349780 DCHS2Q6V1P9 2916 aa5.61□□□□□ -1.51
CDK5RAP2-201ENST00000349780 NF1P21359 2839 aa5.6□□□□□ -1.51
CDK5RAP2-201ENST00000349780 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
CDK5RAP2-201ENST00000349780 DMDP11532 3685 aa5.57□□□□□ -1.52
CDK5RAP2-201ENST00000349780 ASPMQ8IZT6 3477 aa5.55□□□□□ -1.52
CDK5RAP2-201ENST00000349780 KRTAP10-10P60014 251 aa5.54□□□□□ -1.52
CDK5RAP2-201ENST00000349780 LAMA5O15230 3695 aa5.52□□□□□ -1.53
CDK5RAP2-201ENST00000349780 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
CDK5RAP2-201ENST00000349780 MXRA5Q9NR99 2828 aa5.5□□□□□ -1.53
CDK5RAP2-201ENST00000349780 CELSR1Q9NYQ6 3014 aa5.48□□□□□ -1.53
CDK5RAP2-201ENST00000349780 SVEP1Q4LDE5 3571 aa5.48□□□□□ -1.53
CDK5RAP2-201ENST00000349780 RELNP78509 3460 aa5.47□□□□□ -1.53
CDK5RAP2-201ENST00000349780 SPENQ96T58 3664 aaKnown RBP5.46□□□□□ -1.54
CDK5RAP2-201ENST00000349780 SRRM2Q9UQ35 2752 aaKnown RBP5.46□□□□□ -1.54
CDK5RAP2-201ENST00000349780 TENM2Q9NT68 2774 aa5.43□□□□□ -1.54
CDK5RAP2-201ENST00000349780 PDZD2O15018 2839 aa5.42□□□□□ -1.54
CDK5RAP2-201ENST00000349780 TENM3Q9P273 2699 aa5.41□□□□□ -1.54
CDK5RAP2-201ENST00000349780 ALMS1Q8TCU4 4167 aa5.39□□□□□ -1.55
CDK5RAP2-201ENST00000349780 TENM1Q9UKZ4 2725 aa5.36□□□□□ -1.55
CDK5RAP2-201ENST00000349780 CUBNO60494 3623 aa5.3□□□□□ -1.56
CDK5RAP2-201ENST00000349780 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
CDK5RAP2-201ENST00000349780 PKD1L1Q8TDX9 2849 aa5.22□□□□□ -1.57
CDK5RAP2-201ENST00000349780 NBPF19A0A087WUL8 3843 aa5.16□□□□□ -1.58
CDK5RAP2-201ENST00000349780 MEGF8Q7Z7M0 2845 aa5.12□□□□□ -1.59
CDK5RAP2-201ENST00000349780 VPS13CQ709C8 3753 aa5.12□□□□□ -1.59
CDK5RAP2-201ENST00000349780 FBN3Q75N90 2809 aa5.1□□□□□ -1.59
CDK5RAP2-201ENST00000349780 ANK3Q12955 4377 aaKnown RBP5.09□□□□□ -1.59
CDK5RAP2-201ENST00000349780 COL7A1Q02388 2944 aa5.09□□□□□ -1.6
CDK5RAP2-201ENST00000349780 MUC3AQ02505 3323 aa5.08□□□□□ -1.6
CDK5RAP2-201ENST00000349780 OTOGQ6ZRI0 2925 aa5.08□□□□□ -1.6
CDK5RAP2-201ENST00000349780 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
CDK5RAP2-201ENST00000349780 LORP23490 312 aaPredicted RBP5.06□□□□□ -1.6
CDK5RAP2-201ENST00000349780 VWFP04275 2813 aa5.05□□□□□ -1.6
CDK5RAP2-201ENST00000349780 MT1HL1P0DM35 61 aa5.03□□□□□ -1.6
CDK5RAP2-201ENST00000349780 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
CDK5RAP2-201ENST00000349780 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
CDK5RAP2-201ENST00000349780 CSMD2Q7Z408 3487 aa5□□□□□ -1.61
CDK5RAP2-201ENST00000349780 FBN1P35555 2871 aaKnown RBP5□□□□□ -1.61
CDK5RAP2-201ENST00000349780 BSNQ9UPA5 3926 aa4.99□□□□□ -1.61
CDK5RAP2-201ENST00000349780 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
CDK5RAP2-201ENST00000349780 HUWE1Q7Z6Z7 4374 aaKnown RBP4.94□□□□□ -1.62
CDK5RAP2-201ENST00000349780 TRRAPQ9Y4A5 3859 aa4.92□□□□□ -1.62
CDK5RAP2-201ENST00000349780 CSMD3Q7Z407 3707 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms