RNA–Protein interactions for RNA: ENST00000349157.10

PUF60-202, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUF60, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-202ENST00000349157 C4orf48Q5BLP8 95 aa11.37□□□□□ -0.59
PUF60-202ENST00000349157 ZCCHC13Q8WW36 166 aaKnown RBP11.36□□□□□ -0.59
PUF60-202ENST00000349157 IGHV6-1A0A0B4J1U7 121 aa11.35□□□□□ -0.59
PUF60-202ENST00000349157 TYMSOSQ8TAI1 123 aa11.35□□□□□ -0.59
PUF60-202ENST00000349157 SPINK1P00995 79 aa11.34□□□□□ -0.59
PUF60-202ENST00000349157 RPS29P62273 56 aaKnown RBP11.34□□□□□ -0.59
PUF60-202ENST00000349157 SPAG11AQ6PDA7 123 aa11.32□□□□□ -0.6
PUF60-202ENST00000349157 MRPL34Q9BQ48 92 aaKnown RBP11.32□□□□□ -0.6
PUF60-202ENST00000349157 LRP1BQ9NZR2 4599 aa11.31□□□□□ -0.6
PUF60-202ENST00000349157 H0Y9P7 68 aa11.29□□□□□ -0.6
PUF60-202ENST00000349157 TRAV22A0A0B4J277 110 aa11.28□□□□□ -0.6
PUF60-202ENST00000349157 SERP1Q9Y6X1 66 aa11.27□□□□□ -0.61
PUF60-202ENST00000349157 C1orf195Q5TG92 126 aa11.26□□□□□ -0.61
PUF60-202ENST00000349157 LINC00208Q96KT6 92 aa11.23□□□□□ -0.61
PUF60-202ENST00000349157 SMR3BP02814 79 aaPredicted RBP11.23□□□□□ -0.61
PUF60-202ENST00000349157 KRTAP10-4P60372 401 aaPredicted RBP11.21□□□□□ -0.61
PUF60-202ENST00000349157 LINC00304Q8N9R0 145 aa11.21□□□□□ -0.61
PUF60-202ENST00000349157 RYR2Q92736 4967 aa11.21□□□□□ -0.62
PUF60-202ENST00000349157 VPS13BQ7Z7G8 4022 aa11.2□□□□□ -0.62
PUF60-202ENST00000349157 NDUFS5O43920 106 aa11.2□□□□□ -0.62
PUF60-202ENST00000349157 LINC00313P59037 77 aa11.2□□□□□ -0.62
PUF60-202ENST00000349157 DYNC1H1Q14204 4646 aaKnown RBP11.19□□□□□ -0.62
PUF60-202ENST00000349157 C1orf64Q8NEQ6 169 aa11.19□□□□□ -0.62
PUF60-202ENST00000349157 PRR26Q8N8Z3 221 aa11.16□□□□□ -0.62
PUF60-202ENST00000349157 SPANXA2-OT1Q8N9U9 137 aa11.16□□□□□ -0.62
PUF60-202ENST00000349157 FAM229AH3BQW9 127 aa11.16□□□□□ -0.62
PUF60-202ENST00000349157 NOTCH2NLQ7Z3S9 236 aa11.14□□□□□ -0.63
PUF60-202ENST00000349157 CYP4F30PQ9H0H9 118 aa11.13□□□□□ -0.63
PUF60-202ENST00000349157 PKHD1P08F94 4074 aa11.12□□□□□ -0.63
PUF60-202ENST00000349157 Q8N9P0 234 aaPredicted RBP11.11□□□□□ -0.63
PUF60-202ENST00000349157 LOC101927531A0A1B0GV80 90 aa11.09□□□□□ -0.63
PUF60-202ENST00000349157 BIRC6Q9NR09 4857 aa11.08□□□□□ -0.64
PUF60-202ENST00000349157 APOBP04114 4563 aaKnown RBP11.05□□□□□ -0.64
PUF60-202ENST00000349157 SMIM26A0A096LP01 95 aa11.03□□□□□ -0.64
PUF60-202ENST00000349157 EPPK1P58107 5090 aaKnown RBP11.02□□□□□ -0.65
PUF60-202ENST00000349157 OXTP01178 125 aa11.02□□□□□ -0.65
PUF60-202ENST00000349157 KRTAP16-1A8MUX0 517 aa11.01□□□□□ -0.65
PUF60-202ENST00000349157 KRTAP17-1Q9BYP8 105 aa11.01□□□□□ -0.65
PUF60-202ENST00000349157 KRTAP13-3Q3SY46 172 aa11□□□□□ -0.65
PUF60-202ENST00000349157 IGLV7-46A0A075B6I9 117 aa11□□□□□ -0.65
PUF60-202ENST00000349157 Q5VSD8 79 aa10.95□□□□□ -0.66
PUF60-202ENST00000349157 Q5W150 140 aa10.93□□□□□ -0.66
PUF60-202ENST00000349157 PCOTHQ58A44 107 aa10.88□□□□□ -0.67
PUF60-202ENST00000349157 PKHD1L1Q86WI1 4243 aa10.88□□□□□ -0.67
PUF60-202ENST00000349157 KRTAP10-8P60410 259 aa10.86□□□□□ -0.67
PUF60-202ENST00000349157 PRR4Q16378 134 aa10.86□□□□□ -0.67
PUF60-202ENST00000349157 IGKV2-30P06310 120 aa10.84□□□□□ -0.67
PUF60-202ENST00000349157 FAT1Q14517 4588 aa10.83□□□□□ -0.68
PUF60-202ENST00000349157 FP248Q71RG6 208 aaPredicted RBP10.8□□□□□ -0.68
PUF60-202ENST00000349157 Q8N1X5 172 aa10.79□□□□□ -0.68
PUF60-202ENST00000349157 C20orf166-AS1Q96NR2 134 aa10.78□□□□□ -0.68
PUF60-202ENST00000349157 V9GYY9 64 aa10.77□□□□□ -0.68
PUF60-202ENST00000349157 A8MUU9 505 aa10.77□□□□□ -0.69
PUF60-202ENST00000349157 Q1T7F1 81 aa10.73□□□□□ -0.69
PUF60-202ENST00000349157 COA5Q86WW8 74 aa10.73□□□□□ -0.69
PUF60-202ENST00000349157 HRES1P13985 223 aa10.71□□□□□ -0.69
PUF60-202ENST00000349157 ACYP2P14621 99 aa10.7□□□□□ -0.7
PUF60-202ENST00000349157 RETNLBQ9BQ08 111 aa10.7□□□□□ -0.7
PUF60-202ENST00000349157 C7orf65Q6ZTY9 151 aa10.7□□□□□ -0.7
PUF60-202ENST00000349157 RYR1P21817 5038 aa10.68□□□□□ -0.7
PUF60-202ENST00000349157 C4orf26Q17RF5 130 aa10.68□□□□□ -0.7
PUF60-202ENST00000349157 HSPG2P98160 4391 aa10.68□□□□□ -0.7
PUF60-202ENST00000349157 DMAC1Q96GE9 116 aa10.68□□□□□ -0.7
PUF60-202ENST00000349157 Q75L30 129 aa10.66□□□□□ -0.7
PUF60-202ENST00000349157 IGKV2D-30A0A075B6S6 120 aa10.65□□□□□ -0.7
PUF60-202ENST00000349157 C9orf92A6NGG3 77 aa10.65□□□□□ -0.7
PUF60-202ENST00000349157 FLG2Q5D862 2391 aaPredicted RBP10.65□□□□□ -0.7
PUF60-202ENST00000349157 MPLKIPQ8TAP9 179 aa10.64□□□□□ -0.71
PUF60-202ENST00000349157 HERC2O95714 4834 aa10.58□□□□□ -0.72
PUF60-202ENST00000349157 A8MUN3 132 aa10.57□□□□□ -0.72
PUF60-202ENST00000349157 PCLOQ9Y6V0 5065 aa10.55□□□□□ -0.72
PUF60-202ENST00000349157 MT1HL1P0DM35 61 aa10.54□□□□□ -0.72
PUF60-202ENST00000349157 TNXBP22105 4242 aa10.54□□□□□ -0.72
PUF60-202ENST00000349157 CHKB-CPT1BH3BT56 60 aa10.51□□□□□ -0.73
PUF60-202ENST00000349157 ATP11AUNQ6ZP68 121 aa10.47□□□□□ -0.73
PUF60-202ENST00000349157 LINC01558Q9Y6Z2 57 aa10.47□□□□□ -0.73
PUF60-202ENST00000349157 RPL37P61927 97 aaKnown RBP10.44□□□□□ -0.74
PUF60-202ENST00000349157 FAT3Q8TDW7 4589 aa10.44□□□□□ -0.74
PUF60-202ENST00000349157 SPINK7P58062 85 aa10.43□□□□□ -0.74
PUF60-202ENST00000349157 KIAA1109Q2LD37 5005 aa10.42□□□□□ -0.74
PUF60-202ENST00000349157 LRP1Q07954 4544 aaKnown RBP10.39□□□□□ -0.75
PUF60-202ENST00000349157 PSPHP1O15172 72 aa10.38□□□□□ -0.75
PUF60-202ENST00000349157 XP32Q5T750 250 aa10.38□□□□□ -0.75
PUF60-202ENST00000349157 PRR15LQ9BU68 103 aa10.37□□□□□ -0.75
PUF60-202ENST00000349157 DMBT1Q9UGM3 2413 aaPredicted RBP10.36□□□□□ -0.75
PUF60-202ENST00000349157 SPTSSBQ8NFR3 76 aa10.35□□□□□ -0.75
PUF60-202ENST00000349157 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
PUF60-202ENST00000349157 Q5VV11 94 aa10.34□□□□□ -0.75
PUF60-202ENST00000349157 PRO0628Q9UI54 55 aa10.3□□□□□ -0.76
PUF60-202ENST00000349157 COX6B2Q6YFQ2 88 aa10.27□□□□□ -0.77
PUF60-202ENST00000349157 BRK1Q8WUW1 75 aa10.26□□□□□ -0.77
PUF60-202ENST00000349157 SVIPQ8NHG7 77 aa10.24□□□□□ -0.77
PUF60-202ENST00000349157 KRTAP4-5Q9BYR2 181 aa10.2□□□□□ -0.78
PUF60-202ENST00000349157 A0A1B0GU69 56 aa10.19□□□□□ -0.78
PUF60-202ENST00000349157 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
PUF60-202ENST00000349157 A6NED7 52 aa10.15□□□□□ -0.78
PUF60-202ENST00000349157 J3QL48 77 aa10.14□□□□□ -0.79
PUF60-202ENST00000349157 MYCBP2O75592 4640 aa10.12□□□□□ -0.79
PUF60-202ENST00000349157 ABCA13Q86UQ4 5058 aa10.12□□□□□ -0.79
PUF60-202ENST00000349157 SEC61GP60059 68 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms