RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 KRTAP1-4P0C5Y4 121 aa9.98□□□□□ -0.81
SMARCC2-202ENST00000347471 DYNC1H1Q14204 4646 aaKnown RBP9.98□□□□□ -0.81
SMARCC2-202ENST00000347471 C5orf47Q569G3 176 aa9.98□□□□□ -0.81
SMARCC2-202ENST00000347471 VPS13BQ7Z7G8 4022 aa9.97□□□□□ -0.81
SMARCC2-202ENST00000347471 PCOTHQ58A44 107 aa9.96□□□□□ -0.81
SMARCC2-202ENST00000347471 DMBT1Q9UGM3 2413 aaPredicted RBP9.94□□□□□ -0.82
SMARCC2-202ENST00000347471 A0A1B0GVY2 172 aa9.94□□□□□ -0.82
SMARCC2-202ENST00000347471 NDUFC1O43677 76 aa9.94□□□□□ -0.82
SMARCC2-202ENST00000347471 C1orf64Q8NEQ6 169 aa9.94□□□□□ -0.82
SMARCC2-202ENST00000347471 MRPL34Q9BQ48 92 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-202ENST00000347471 FAM229BQ4G0N7 80 aa9.91□□□□□ -0.82
SMARCC2-202ENST00000347471 TRAV22A0A0B4J277 110 aa9.91□□□□□ -0.82
SMARCC2-202ENST00000347471 C1orf195Q5TG92 126 aa9.9□□□□□ -0.82
SMARCC2-202ENST00000347471 LINC00304Q8N9R0 145 aa9.89□□□□□ -0.83
SMARCC2-202ENST00000347471 CD164Q04900 197 aa9.89□□□□□ -0.83
SMARCC2-202ENST00000347471 LINC00313P59037 77 aa9.88□□□□□ -0.83
SMARCC2-202ENST00000347471 OXTP01178 125 aa9.88□□□□□ -0.83
SMARCC2-202ENST00000347471 LIMD2Q9BT23 127 aa9.88□□□□□ -0.83
SMARCC2-202ENST00000347471 RYR2Q92736 4967 aa9.87□□□□□ -0.83
SMARCC2-202ENST00000347471 FAM229AH3BQW9 127 aa9.83□□□□□ -0.84
SMARCC2-202ENST00000347471 MPLKIPQ8TAP9 179 aa9.8□□□□□ -0.84
SMARCC2-202ENST00000347471 SERP1Q9Y6X1 66 aa9.8□□□□□ -0.84
SMARCC2-202ENST00000347471 C9orf92A6NGG3 77 aa9.79□□□□□ -0.84
SMARCC2-202ENST00000347471 SPINK1P00995 79 aa9.79□□□□□ -0.84
SMARCC2-202ENST00000347471 TP53AIP1Q9HCN2 124 aa9.79□□□□□ -0.84
SMARCC2-202ENST00000347471 ZCCHC13Q8WW36 166 aaKnown RBP9.77□□□□□ -0.84
SMARCC2-202ENST00000347471 Q5W150 140 aa9.76□□□□□ -0.85
SMARCC2-202ENST00000347471 Q5VSD8 79 aa9.75□□□□□ -0.85
SMARCC2-202ENST00000347471 C8orf87E5RJ46 101 aa9.73□□□□□ -0.85
SMARCC2-202ENST00000347471 RPS28P62857 69 aaKnown RBP9.73□□□□□ -0.85
SMARCC2-202ENST00000347471 ATP5EP56381 51 aaPredicted RBP9.72□□□□□ -0.85
SMARCC2-202ENST00000347471 APOBP04114 4563 aaKnown RBP9.72□□□□□ -0.85
SMARCC2-202ENST00000347471 IGKV2D-30A0A075B6S6 120 aa9.71□□□□□ -0.85
SMARCC2-202ENST00000347471 IGKV2-30P06310 120 aa9.71□□□□□ -0.85
SMARCC2-202ENST00000347471 RYR3Q15413 4870 aa9.71□□□□□ -0.86
SMARCC2-202ENST00000347471 C4orf26Q17RF5 130 aa9.69□□□□□ -0.86
SMARCC2-202ENST00000347471 ASB16-AS1Q495Z4 193 aa9.68□□□□□ -0.86
SMARCC2-202ENST00000347471 H3BPC8 53 aa9.67□□□□□ -0.86
SMARCC2-202ENST00000347471 Q8N9P0 234 aaPredicted RBP9.66□□□□□ -0.86
SMARCC2-202ENST00000347471 SPAG11AQ6PDA7 123 aa9.66□□□□□ -0.86
SMARCC2-202ENST00000347471 KRTAP10-4P60372 401 aaPredicted RBP9.65□□□□□ -0.86
SMARCC2-202ENST00000347471 KIAA1109Q2LD37 5005 aa9.64□□□□□ -0.87
SMARCC2-202ENST00000347471 SMIM26A0A096LP01 95 aa9.62□□□□□ -0.87
SMARCC2-202ENST00000347471 Q5XG85 94 aa9.62□□□□□ -0.87
SMARCC2-202ENST00000347471 LRP1Q07954 4544 aaKnown RBP9.6□□□□□ -0.87
SMARCC2-202ENST00000347471 Q8N1X5 172 aa9.58□□□□□ -0.88
SMARCC2-202ENST00000347471 FP248Q71RG6 208 aaPredicted RBP9.58□□□□□ -0.88
SMARCC2-202ENST00000347471 LOC101927531A0A1B0GV80 90 aa9.57□□□□□ -0.88
SMARCC2-202ENST00000347471 CYP4F30PQ9H0H9 118 aa9.55□□□□□ -0.88
SMARCC2-202ENST00000347471 PSPHP1O15172 72 aa9.53□□□□□ -0.88
SMARCC2-202ENST00000347471 KRTAP16-1A8MUX0 517 aa9.53□□□□□ -0.88
SMARCC2-202ENST00000347471 COA5Q86WW8 74 aa9.52□□□□□ -0.89
SMARCC2-202ENST00000347471 IGLV7-46A0A075B6I9 117 aa9.5□□□□□ -0.89
SMARCC2-202ENST00000347471 HRES1P13985 223 aa9.5□□□□□ -0.89
SMARCC2-202ENST00000347471 SPANXA2-OT1Q8N9U9 137 aa9.5□□□□□ -0.89
SMARCC2-202ENST00000347471 KRTAP17-1Q9BYP8 105 aa9.49□□□□□ -0.89
SMARCC2-202ENST00000347471 CHKB-CPT1BH3BT56 60 aa9.46□□□□□ -0.9
SMARCC2-202ENST00000347471 HSPG2P98160 4391 aa9.45□□□□□ -0.9
SMARCC2-202ENST00000347471 MYCBP2O75592 4640 aa9.44□□□□□ -0.9
SMARCC2-202ENST00000347471 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
SMARCC2-202ENST00000347471 EPPK1P58107 5090 aaKnown RBP9.44□□□□□ -0.9
SMARCC2-202ENST00000347471 RPS29P62273 56 aaKnown RBP9.43□□□□□ -0.9
SMARCC2-202ENST00000347471 RYR1P21817 5038 aa9.41□□□□□ -0.9
SMARCC2-202ENST00000347471 C7orf65Q6ZTY9 151 aa9.4□□□□□ -0.9
SMARCC2-202ENST00000347471 A8MUN3 132 aa9.37□□□□□ -0.91
SMARCC2-202ENST00000347471 BRK1Q8WUW1 75 aa9.37□□□□□ -0.91
SMARCC2-202ENST00000347471 PRR15LQ9BU68 103 aa9.36□□□□□ -0.91
SMARCC2-202ENST00000347471 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
SMARCC2-202ENST00000347471 ACYP2P14621 99 aa9.34□□□□□ -0.91
SMARCC2-202ENST00000347471 KRTAP4-5Q9BYR2 181 aa9.31□□□□□ -0.92
SMARCC2-202ENST00000347471 PKHD1L1Q86WI1 4243 aa9.31□□□□□ -0.92
SMARCC2-202ENST00000347471 ATP11AUNQ6ZP68 121 aa9.28□□□□□ -0.92
SMARCC2-202ENST00000347471 SPINK7P58062 85 aa9.27□□□□□ -0.92
SMARCC2-202ENST00000347471 FAT3Q8TDW7 4589 aa9.27□□□□□ -0.93
SMARCC2-202ENST00000347471 A8MUU9 505 aa9.24□□□□□ -0.93
SMARCC2-202ENST00000347471 C20orf166-AS1Q96NR2 134 aa9.24□□□□□ -0.93
SMARCC2-202ENST00000347471 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
SMARCC2-202ENST00000347471 Q1T7F1 81 aa9.22□□□□□ -0.93
SMARCC2-202ENST00000347471 V9GYY9 64 aa9.21□□□□□ -0.93
SMARCC2-202ENST00000347471 MT1HL1P0DM35 61 aa9.2□□□□□ -0.94
SMARCC2-202ENST00000347471 J3QL48 77 aa9.18□□□□□ -0.94
SMARCC2-202ENST00000347471 A6NED7 52 aa9.17□□□□□ -0.94
SMARCC2-202ENST00000347471 TNXBP22105 4242 aa9.14□□□□□ -0.95
SMARCC2-202ENST00000347471 Q5VV11 94 aa9.13□□□□□ -0.95
SMARCC2-202ENST00000347471 Q75L30 129 aa9.13□□□□□ -0.95
SMARCC2-202ENST00000347471 XP32Q5T750 250 aa9.13□□□□□ -0.95
SMARCC2-202ENST00000347471 A8MU10 97 aa9.1□□□□□ -0.95
SMARCC2-202ENST00000347471 SPTSSBQ8NFR3 76 aa9.07□□□□□ -0.96
SMARCC2-202ENST00000347471 A0A1B0GU69 56 aa9.06□□□□□ -0.96
SMARCC2-202ENST00000347471 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
SMARCC2-202ENST00000347471 LINC01558Q9Y6Z2 57 aa9.04□□□□□ -0.96
SMARCC2-202ENST00000347471 PRO0628Q9UI54 55 aa9□□□□□ -0.97
SMARCC2-202ENST00000347471 KRTAP3-1Q9BYR8 98 aa8.97□□□□□ -0.97
SMARCC2-202ENST00000347471 ABCA13Q86UQ4 5058 aa8.96□□□□□ -0.97
SMARCC2-202ENST00000347471 LRP2P98164 4655 aa8.95□□□□□ -0.98
SMARCC2-202ENST00000347471 HERC2O95714 4834 aa8.95□□□□□ -0.98
SMARCC2-202ENST00000347471 SEC61GP60059 68 aa8.95□□□□□ -0.98
SMARCC2-202ENST00000347471 COX6B2Q6YFQ2 88 aa8.94□□□□□ -0.98
SMARCC2-202ENST00000347471 LPAP08519 4548 aa8.94□□□□□ -0.98
SMARCC2-202ENST00000347471 LCA10Q71F78 164 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms