RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 KIAA1109Q2LD37 5005 aa14.57□□□□□ -0.08
TRADD-201ENST00000345057 IGHV6-1A0A0B4J1U7 121 aa14.57□□□□□ -0.08
TRADD-201ENST00000345057 hDV103S1A0JD37 113 aa14.57□□□□□ -0.08
TRADD-201ENST00000345057 RPS29P62273 56 aaKnown RBP14.57□□□□□ -0.08
TRADD-201ENST00000345057 LINC00304Q8N9R0 145 aa14.55□□□□□ -0.08
TRADD-201ENST00000345057 KLKP1Q107X0 134 aa14.53□□□□□ -0.08
TRADD-201ENST00000345057 C1orf195Q5TG92 126 aa14.51□□□□□ -0.09
TRADD-201ENST00000345057 TMEM254Q8TBM7 123 aa14.5□□□□□ -0.09
TRADD-201ENST00000345057 C5orf47Q569G3 176 aa14.49□□□□□ -0.09
TRADD-201ENST00000345057 RYR1P21817 5038 aa14.49□□□□□ -0.09
TRADD-201ENST00000345057 C8orf87E5RJ46 101 aa14.48□□□□□ -0.09
TRADD-201ENST00000345057 Q5VSD8 79 aa14.48□□□□□ -0.09
TRADD-201ENST00000345057 NDUFC1O43677 76 aa14.44□□□□□ -0.1
TRADD-201ENST00000345057 HSPG2P98160 4391 aa14.43□□□□□ -0.1
TRADD-201ENST00000345057 TP53AIP1Q9HCN2 124 aa14.43□□□□□ -0.1
TRADD-201ENST00000345057 MRPL34Q9BQ48 92 aaKnown RBP14.42□□□□□ -0.1
TRADD-201ENST00000345057 SNURFQ9Y675 71 aa14.42□□□□□ -0.1
TRADD-201ENST00000345057 CYSTM1Q9H1C7 97 aa14.41□□□□□ -0.1
TRADD-201ENST00000345057 A0A0U1RQV1 116 aa14.4□□□□□ -0.1
TRADD-201ENST00000345057 TMEM258P61165 79 aa14.4□□□□□ -0.1
TRADD-201ENST00000345057 HERC2O95714 4834 aa14.39□□□□□ -0.11
TRADD-201ENST00000345057 MP68P56378 58 aa14.39□□□□□ -0.11
TRADD-201ENST00000345057 PKHD1L1Q86WI1 4243 aa14.38□□□□□ -0.11
TRADD-201ENST00000345057 LINC00313P59037 77 aa14.35□□□□□ -0.11
TRADD-201ENST00000345057 NOTCH2NLQ7Z3S9 236 aa14.35□□□□□ -0.11
TRADD-201ENST00000345057 H3BPC8 53 aa14.33□□□□□ -0.11
TRADD-201ENST00000345057 H7BZZ5 65 aa14.32□□□□□ -0.12
TRADD-201ENST00000345057 NDUFS5O43920 106 aa14.31□□□□□ -0.12
TRADD-201ENST00000345057 TRAV22A0A0B4J277 110 aa14.29□□□□□ -0.12
TRADD-201ENST00000345057 H0Y9P7 68 aa14.29□□□□□ -0.12
TRADD-201ENST00000345057 KRTAP17-1Q9BYP8 105 aa14.28□□□□□ -0.12
TRADD-201ENST00000345057 Q8N1X5 172 aa14.27□□□□□ -0.13
TRADD-201ENST00000345057 ZCCHC13Q8WW36 166 aaKnown RBP14.25□□□□□ -0.13
TRADD-201ENST00000345057 LINC00208Q96KT6 92 aa14.21□□□□□ -0.13
TRADD-201ENST00000345057 KRTAP10-8P60410 259 aa14.2□□□□□ -0.14
TRADD-201ENST00000345057 FAM236DA0A1B0GTK5 79 aa14.18□□□□□ -0.14
TRADD-201ENST00000345057 FAM236CP0DP71 79 aa14.18□□□□□ -0.14
TRADD-201ENST00000345057 Q8N9P0 234 aaPredicted RBP14.18□□□□□ -0.14
TRADD-201ENST00000345057 ATP5EP56381 51 aaPredicted RBP14.17□□□□□ -0.14
TRADD-201ENST00000345057 C1orf64Q8NEQ6 169 aa14.15□□□□□ -0.14
TRADD-201ENST00000345057 KRTAP4-5Q9BYR2 181 aa14.15□□□□□ -0.14
TRADD-201ENST00000345057 KRTAP16-1A8MUX0 517 aa14.13□□□□□ -0.15
TRADD-201ENST00000345057 ABCA13Q86UQ4 5058 aa14.08□□□□□ -0.16
TRADD-201ENST00000345057 LOC101927531A0A1B0GV80 90 aa14.02□□□□□ -0.16
TRADD-201ENST00000345057 RPS28P62857 69 aaKnown RBP14.02□□□□□ -0.16
TRADD-201ENST00000345057 TNXBP22105 4242 aa14.01□□□□□ -0.17
TRADD-201ENST00000345057 KRTAP13-3Q3SY46 172 aa14□□□□□ -0.17
TRADD-201ENST00000345057 PCLOQ9Y6V0 5065 aa13.99□□□□□ -0.17
TRADD-201ENST00000345057 Q5W150 140 aa13.99□□□□□ -0.17
TRADD-201ENST00000345057 FLG2Q5D862 2391 aaPredicted RBP13.98□□□□□ -0.17
TRADD-201ENST00000345057 RETNLBQ9BQ08 111 aa13.98□□□□□ -0.17
TRADD-201ENST00000345057 LRP1Q07954 4544 aaKnown RBP13.98□□□□□ -0.17
TRADD-201ENST00000345057 SPANXA2-OT1Q8N9U9 137 aa13.96□□□□□ -0.17
TRADD-201ENST00000345057 FP248Q71RG6 208 aaPredicted RBP13.95□□□□□ -0.18
TRADD-201ENST00000345057 FAT3Q8TDW7 4589 aa13.95□□□□□ -0.18
TRADD-201ENST00000345057 OXTP01178 125 aa13.95□□□□□ -0.18
TRADD-201ENST00000345057 SERP1Q9Y6X1 66 aa13.94□□□□□ -0.18
TRADD-201ENST00000345057 MT1HL1P0DM35 61 aa13.89□□□□□ -0.19
TRADD-201ENST00000345057 C9orf92A6NGG3 77 aa13.88□□□□□ -0.19
TRADD-201ENST00000345057 CYP4F30PQ9H0H9 118 aa13.87□□□□□ -0.19
TRADD-201ENST00000345057 C20orf166-AS1Q96NR2 134 aa13.86□□□□□ -0.19
TRADD-201ENST00000345057 PCOTHQ58A44 107 aa13.84□□□□□ -0.19
TRADD-201ENST00000345057 A8MUU9 505 aa13.83□□□□□ -0.2
TRADD-201ENST00000345057 IGLV7-46A0A075B6I9 117 aa13.81□□□□□ -0.2
TRADD-201ENST00000345057 IGKV2-30P06310 120 aa13.8□□□□□ -0.2
TRADD-201ENST00000345057 MYCBP2O75592 4640 aa13.79□□□□□ -0.2
TRADD-201ENST00000345057 PRR4Q16378 134 aa13.76□□□□□ -0.21
TRADD-201ENST00000345057 DMBT1Q9UGM3 2413 aaPredicted RBP13.73□□□□□ -0.21
TRADD-201ENST00000345057 Q75L30 129 aa13.72□□□□□ -0.21
TRADD-201ENST00000345057 IGKV2D-30A0A075B6S6 120 aa13.67□□□□□ -0.22
TRADD-201ENST00000345057 C7orf65Q6ZTY9 151 aa13.65□□□□□ -0.22
TRADD-201ENST00000345057 SMIM26A0A096LP01 95 aa13.61□□□□□ -0.23
TRADD-201ENST00000345057 HRES1P13985 223 aa13.61□□□□□ -0.23
TRADD-201ENST00000345057 ATP11AUNQ6ZP68 121 aa13.54□□□□□ -0.24
TRADD-201ENST00000345057 J3QL48 77 aa13.53□□□□□ -0.24
TRADD-201ENST00000345057 RPL37P61927 97 aaKnown RBP13.52□□□□□ -0.25
TRADD-201ENST00000345057 XP32Q5T750 250 aa13.52□□□□□ -0.25
TRADD-201ENST00000345057 COA5Q86WW8 74 aa13.49□□□□□ -0.25
TRADD-201ENST00000345057 DMAC1Q96GE9 116 aa13.49□□□□□ -0.25
TRADD-201ENST00000345057 ACYP2P14621 99 aa13.48□□□□□ -0.25
TRADD-201ENST00000345057 TPRXLQ17RH7 258 aa13.48□□□□□ -0.25
TRADD-201ENST00000345057 HERC1Q15751 4861 aa13.43□□□□□ -0.26
TRADD-201ENST00000345057 SPINK7P58062 85 aa13.42□□□□□ -0.26
TRADD-201ENST00000345057 A8MUN3 132 aa13.36□□□□□ -0.27
TRADD-201ENST00000345057 V9GYY9 64 aa13.3□□□□□ -0.28
TRADD-201ENST00000345057 CHKB-CPT1BH3BT56 60 aa13.29□□□□□ -0.28
TRADD-201ENST00000345057 MPLKIPQ8TAP9 179 aa13.29□□□□□ -0.28
TRADD-201ENST00000345057 C4orf26Q17RF5 130 aa13.28□□□□□ -0.28
TRADD-201ENST00000345057 Q1T7F1 81 aa13.28□□□□□ -0.28
TRADD-201ENST00000345057 COX6B2Q6YFQ2 88 aa13.14□□□□□ -0.31
TRADD-201ENST00000345057 KRTAP3-1Q9BYR8 98 aa13.05□□□□□ -0.32
TRADD-201ENST00000345057 LINC01558Q9Y6Z2 57 aa13.05□□□□□ -0.32
TRADD-201ENST00000345057 HMCN2Q8NDA2 5059 aa13.05□□□□□ -0.32
TRADD-201ENST00000345057 SEC61BP60468 96 aaKnown RBP13.04□□□□□ -0.32
TRADD-201ENST00000345057 SPTSSBQ8NFR3 76 aa13.02□□□□□ -0.32
TRADD-201ENST00000345057 LRP2P98164 4655 aa12.99□□□□□ -0.33
TRADD-201ENST00000345057 LPAP08519 4548 aa12.98□□□□□ -0.33
TRADD-201ENST00000345057 PSPHP1O15172 72 aa12.97□□□□□ -0.33
TRADD-201ENST00000345057 PRR15LQ9BU68 103 aa12.96□□□□□ -0.33
TRADD-201ENST00000345057 Q5VV11 94 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms