RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 BAHCC1Q9P281 2608 aa7.98□□□□□ -1.13
CUL3-202ENST00000344951 XP32Q5T750 250 aa7.98□□□□□ -1.13
CUL3-202ENST00000344951 H0YAA0 97 aa7.97□□□□□ -1.13
CUL3-202ENST00000344951 CFAP47Q6ZTR5 3102 aa7.96□□□□□ -1.13
CUL3-202ENST00000344951 IGSF10Q6WRI0 2623 aa7.94□□□□□ -1.14
CUL3-202ENST00000344951 UBR5O95071 2799 aaPredicted RBP7.92□□□□□ -1.14
CUL3-202ENST00000344951 SPEGQ15772 3267 aa7.91□□□□□ -1.14
CUL3-202ENST00000344951 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
CUL3-202ENST00000344951 APCP25054 2843 aa7.9□□□□□ -1.14
CUL3-202ENST00000344951 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
CUL3-202ENST00000344951 BOD1L1Q8NFC6 3051 aa7.89□□□□□ -1.15
CUL3-202ENST00000344951 ADGRG4Q8IZF6 3080 aa7.89□□□□□ -1.15
CUL3-202ENST00000344951 ITPR1Q14643 2758 aa7.89□□□□□ -1.15
CUL3-202ENST00000344951 ATMQ13315 3056 aa7.88□□□□□ -1.15
CUL3-202ENST00000344951 ASH1LQ9NR48 2969 aaKnown RBP7.88□□□□□ -1.15
CUL3-202ENST00000344951 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
CUL3-202ENST00000344951 FRYLO94915 3013 aa7.87□□□□□ -1.15
CUL3-202ENST00000344951 DMXL2Q8TDJ6 3036 aa7.86□□□□□ -1.15
CUL3-202ENST00000344951 KRTAP1-4P0C5Y4 121 aa7.85□□□□□ -1.15
CUL3-202ENST00000344951 ITPR2Q14571 2701 aa7.84□□□□□ -1.15
CUL3-202ENST00000344951 NSD1Q96L73 2696 aaPredicted RBP7.82□□□□□ -1.16
CUL3-202ENST00000344951 ZZEF1O43149 2961 aa7.81□□□□□ -1.16
CUL3-202ENST00000344951 TACC2O95359 2948 aa7.81□□□□□ -1.16
CUL3-202ENST00000344951 SPTBN5Q9NRC6 3674 aaKnown RBP7.8□□□□□ -1.16
CUL3-202ENST00000344951 UTP20O75691 2785 aaKnown RBP7.8□□□□□ -1.16
CUL3-202ENST00000344951 HIVEP1P15822 2718 aa7.79□□□□□ -1.16
CUL3-202ENST00000344951 MYO15AQ9UKN7 3530 aa7.76□□□□□ -1.17
CUL3-202ENST00000344951 COL12A1Q99715 3063 aa7.76□□□□□ -1.17
CUL3-202ENST00000344951 KMT2BQ9UMN6 2715 aaPredicted RBP7.76□□□□□ -1.17
CUL3-202ENST00000344951 USP34Q70CQ2 3546 aa7.72□□□□□ -1.17
CUL3-202ENST00000344951 EYSQ5T1H1 3165 aa7.7□□□□□ -1.18
CUL3-202ENST00000344951 TPRXLQ17RH7 258 aa7.64□□□□□ -1.19
CUL3-202ENST00000344951 FLNCQ14315 2725 aa7.6□□□□□ -1.19
CUL3-202ENST00000344951 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
CUL3-202ENST00000344951 KRTAP13-3Q3SY46 172 aa7.58□□□□□ -1.2
CUL3-202ENST00000344951 ASPMQ8IZT6 3477 aa7.57□□□□□ -1.2
CUL3-202ENST00000344951 WDFY3Q8IZQ1 3526 aa7.57□□□□□ -1.2
CUL3-202ENST00000344951 CELSR2Q9HCU4 2923 aa7.56□□□□□ -1.2
CUL3-202ENST00000344951 CRCT1Q9UGL9 99 aa7.53□□□□□ -1.2
CUL3-202ENST00000344951 HRNRQ86YZ3 2850 aaPredicted RBP7.52□□□□□ -1.21
CUL3-202ENST00000344951 TNRC18O15417 2968 aaPredicted RBP7.51□□□□□ -1.21
CUL3-202ENST00000344951 DCHS2Q6V1P9 2916 aa7.46□□□□□ -1.21
CUL3-202ENST00000344951 NIPBLQ6KC79 2804 aaeCLIP7.44□□□□□ -1.22
CUL3-202ENST00000344951 KRTAP21-3Q3LHN1 58 aa7.43□□□□□ -1.22
CUL3-202ENST00000344951 LOC400499M0QZD8 3231 aa7.42□□□□□ -1.22
CUL3-202ENST00000344951 ZANQ9Y493 2812 aa7.42□□□□□ -1.22
CUL3-202ENST00000344951 KRTAP15-1Q3LI76 137 aa7.42□□□□□ -1.22
CUL3-202ENST00000344951 FBN2P35556 2912 aa7.37□□□□□ -1.23
CUL3-202ENST00000344951 DMXL1Q9Y485 3027 aa7.36□□□□□ -1.23
CUL3-202ENST00000344951 DCHS1Q96JQ0 3298 aa7.34□□□□□ -1.23
CUL3-202ENST00000344951 TGP01266 2768 aa7.31□□□□□ -1.24
CUL3-202ENST00000344951 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
CUL3-202ENST00000344951 TENM4Q6N022 2769 aa7.27□□□□□ -1.25
CUL3-202ENST00000344951 KRTAP13-4Q3LI77 160 aa7.27□□□□□ -1.25
CUL3-202ENST00000344951 ZFHX4Q86UP3 3567 aa7.27□□□□□ -1.25
CUL3-202ENST00000344951 NF1P21359 2839 aa7.26□□□□□ -1.25
CUL3-202ENST00000344951 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
CUL3-202ENST00000344951 CSMD1Q96PZ7 3565 aa7.25□□□□□ -1.25
CUL3-202ENST00000344951 CELSR1Q9NYQ6 3014 aa7.22□□□□□ -1.25
CUL3-202ENST00000344951 RELNP78509 3460 aa7.2□□□□□ -1.26
CUL3-202ENST00000344951 LAMA5O15230 3695 aa7.19□□□□□ -1.26
CUL3-202ENST00000344951 NBPF19A0A087WUL8 3843 aa7.09□□□□□ -1.27
CUL3-202ENST00000344951 TENM2Q9NT68 2774 aa7.08□□□□□ -1.28
CUL3-202ENST00000344951 TENM1Q9UKZ4 2725 aa7.08□□□□□ -1.28
CUL3-202ENST00000344951 MXRA5Q9NR99 2828 aa7.07□□□□□ -1.28
CUL3-202ENST00000344951 TENM3Q9P273 2699 aa7.05□□□□□ -1.28
CUL3-202ENST00000344951 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
CUL3-202ENST00000344951 SMG1Q96Q15 3661 aaKnown RBP7.05□□□□□ -1.28
CUL3-202ENST00000344951 CUBNO60494 3623 aa6.98□□□□□ -1.29
CUL3-202ENST00000344951 DMDP11532 3685 aa6.91□□□□□ -1.3
CUL3-202ENST00000344951 SVEP1Q4LDE5 3571 aa6.88□□□□□ -1.31
CUL3-202ENST00000344951 PDZD2O15018 2839 aa6.85□□□□□ -1.31
CUL3-202ENST00000344951 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
CUL3-202ENST00000344951 ANK3Q12955 4377 aaKnown RBP6.84□□□□□ -1.31
CUL3-202ENST00000344951 SPENQ96T58 3664 aaKnown RBP6.81□□□□□ -1.32
CUL3-202ENST00000344951 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
CUL3-202ENST00000344951 VWFP04275 2813 aa6.78□□□□□ -1.32
CUL3-202ENST00000344951 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
CUL3-202ENST00000344951 PKD1L1Q8TDX9 2849 aa6.77□□□□□ -1.33
CUL3-202ENST00000344951 ZFHX3Q15911 3703 aa6.73□□□□□ -1.33
CUL3-202ENST00000344951 KRTAP10-5P60370 271 aa6.71□□□□□ -1.34
CUL3-202ENST00000344951 CSMD2Q7Z408 3487 aa6.67□□□□□ -1.34
CUL3-202ENST00000344951 INE1O15225 51 aa6.67□□□□□ -1.34
CUL3-202ENST00000344951 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
CUL3-202ENST00000344951 FBN3Q75N90 2809 aa6.61□□□□□ -1.35
CUL3-202ENST00000344951 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
CUL3-202ENST00000344951 KRTAP12-3P60328 96 aa6.6□□□□□ -1.35
CUL3-202ENST00000344951 FBN1P35555 2871 aaKnown RBP6.59□□□□□ -1.35
CUL3-202ENST00000344951 MEGF8Q7Z7M0 2845 aa6.57□□□□□ -1.36
CUL3-202ENST00000344951 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
CUL3-202ENST00000344951 MT1HL1P0DM35 61 aa6.57□□□□□ -1.36
CUL3-202ENST00000344951 HUWE1Q7Z6Z7 4374 aaKnown RBP6.56□□□□□ -1.36
CUL3-202ENST00000344951 TRRAPQ9Y4A5 3859 aa6.54□□□□□ -1.36
CUL3-202ENST00000344951 MUC3AQ02505 3323 aa6.53□□□□□ -1.36
CUL3-202ENST00000344951 OTOGQ6ZRI0 2925 aa6.51□□□□□ -1.37
CUL3-202ENST00000344951 SRRM2Q9UQ35 2752 aaKnown RBP6.48□□□□□ -1.37
CUL3-202ENST00000344951 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
CUL3-202ENST00000344951 BSNQ9UPA5 3926 aa6.47□□□□□ -1.37
CUL3-202ENST00000344951 VPS13CQ709C8 3753 aa6.45□□□□□ -1.38
CUL3-202ENST00000344951 KRTAP10-4P60372 401 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms