RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
CDC42-202ENST00000344548 ASB16-AS1Q495Z4 193 aa7.74□□□□□ -1.17
CDC42-202ENST00000344548 CASC2Q6XLA1 102 aa7.74□□□□□ -1.17
CDC42-202ENST00000344548 NDUFB1O75438 58 aa7.73□□□□□ -1.17
CDC42-202ENST00000344548 Q5XG85 94 aa7.73□□□□□ -1.17
CDC42-202ENST00000344548 C20orf197Q8N268 126 aa7.73□□□□□ -1.17
CDC42-202ENST00000344548 FLG2Q5D862 2391 aaPredicted RBP7.72□□□□□ -1.17
CDC42-202ENST00000344548 LINC00304Q8N9R0 145 aa7.72□□□□□ -1.17
CDC42-202ENST00000344548 C8orf17Q9NRJ1 99 aa7.72□□□□□ -1.17
CDC42-202ENST00000344548 C4orf48Q5BLP8 95 aa7.71□□□□□ -1.17
CDC42-202ENST00000344548 SPINK1P00995 79 aa7.71□□□□□ -1.18
CDC42-202ENST00000344548 SNURFQ9Y675 71 aa7.7□□□□□ -1.18
CDC42-202ENST00000344548 hDV103S1A0JD37 113 aa7.69□□□□□ -1.18
CDC42-202ENST00000344548 TNXBP22105 4242 aa7.69□□□□□ -1.18
CDC42-202ENST00000344548 MYCBP2O75592 4640 aa7.68□□□□□ -1.18
CDC42-202ENST00000344548 LIMD2Q9BT23 127 aa7.67□□□□□ -1.18
CDC42-202ENST00000344548 TMEM254Q8TBM7 123 aa7.65□□□□□ -1.18
CDC42-202ENST00000344548 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.19
CDC42-202ENST00000344548 Q8N1X5 172 aa7.64□□□□□ -1.19
CDC42-202ENST00000344548 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
CDC42-202ENST00000344548 KLKP1Q107X0 134 aa7.63□□□□□ -1.19
CDC42-202ENST00000344548 SPAG11AQ6PDA7 123 aa7.63□□□□□ -1.19
CDC42-202ENST00000344548 A0A0U1RQV1 116 aa7.62□□□□□ -1.19
CDC42-202ENST00000344548 MRPL34Q9BQ48 92 aaKnown RBP7.62□□□□□ -1.19
CDC42-202ENST00000344548 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
CDC42-202ENST00000344548 RETNLBQ9BQ08 111 aa7.61□□□□□ -1.19
CDC42-202ENST00000344548 RPS29P62273 56 aaKnown RBP7.6□□□□□ -1.19
CDC42-202ENST00000344548 H7BZZ5 65 aa7.59□□□□□ -1.19
CDC42-202ENST00000344548 LINC00313P59037 77 aa7.59□□□□□ -1.19
CDC42-202ENST00000344548 DMBT1Q9UGM3 2413 aaPredicted RBP7.58□□□□□ -1.2
CDC42-202ENST00000344548 NDUFS5O43920 106 aa7.58□□□□□ -1.2
CDC42-202ENST00000344548 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
CDC42-202ENST00000344548 ZCCHC13Q8WW36 166 aaKnown RBP7.57□□□□□ -1.2
CDC42-202ENST00000344548 C8orf87E5RJ46 101 aa7.55□□□□□ -1.2
CDC42-202ENST00000344548 H0Y9P7 68 aa7.54□□□□□ -1.2
CDC42-202ENST00000344548 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
CDC42-202ENST00000344548 Q5W150 140 aa7.54□□□□□ -1.2
CDC42-202ENST00000344548 LINC00208Q96KT6 92 aa7.54□□□□□ -1.2
CDC42-202ENST00000344548 TRAV22A0A0B4J277 110 aa7.52□□□□□ -1.21
CDC42-202ENST00000344548 Q8N9P0 234 aaPredicted RBP7.51□□□□□ -1.21
CDC42-202ENST00000344548 TP53AIP1Q9HCN2 124 aa7.5□□□□□ -1.21
CDC42-202ENST00000344548 C9orf92A6NGG3 77 aa7.49□□□□□ -1.21
CDC42-202ENST00000344548 MP68P56378 58 aa7.49□□□□□ -1.21
CDC42-202ENST00000344548 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
CDC42-202ENST00000344548 TMEM258P61165 79 aa7.49□□□□□ -1.21
CDC42-202ENST00000344548 C1orf64Q8NEQ6 169 aa7.48□□□□□ -1.21
CDC42-202ENST00000344548 SEC61GP60059 68 aa7.47□□□□□ -1.21
CDC42-202ENST00000344548 ABCA13Q86UQ4 5058 aa7.45□□□□□ -1.22
CDC42-202ENST00000344548 NDUFC1O43677 76 aa7.44□□□□□ -1.22
CDC42-202ENST00000344548 RPS28P62857 69 aaKnown RBP7.44□□□□□ -1.22
CDC42-202ENST00000344548 FAM236DA0A1B0GTK5 79 aa7.43□□□□□ -1.22
CDC42-202ENST00000344548 FAM236CP0DP71 79 aa7.43□□□□□ -1.22
CDC42-202ENST00000344548 BIRC6Q9NR09 4857 aa7.42□□□□□ -1.22
CDC42-202ENST00000344548 H3BPC8 53 aa7.41□□□□□ -1.22
CDC42-202ENST00000344548 PRR4Q16378 134 aa7.4□□□□□ -1.22
CDC42-202ENST00000344548 PCOTHQ58A44 107 aa7.4□□□□□ -1.22
CDC42-202ENST00000344548 OXTP01178 125 aa7.39□□□□□ -1.23
CDC42-202ENST00000344548 HERC2O95714 4834 aa7.39□□□□□ -1.23
CDC42-202ENST00000344548 CYP4F30PQ9H0H9 118 aa7.35□□□□□ -1.23
CDC42-202ENST00000344548 A8MUU9 505 aa7.34□□□□□ -1.23
CDC42-202ENST00000344548 C20orf166-AS1Q96NR2 134 aa7.34□□□□□ -1.23
CDC42-202ENST00000344548 PRO0628Q9UI54 55 aa7.34□□□□□ -1.24
CDC42-202ENST00000344548 V9GYY9 64 aa7.34□□□□□ -1.24
CDC42-202ENST00000344548 IGLV7-46A0A075B6I9 117 aa7.32□□□□□ -1.24
CDC42-202ENST00000344548 LOC101927531A0A1B0GV80 90 aa7.32□□□□□ -1.24
CDC42-202ENST00000344548 IGKV2-30P06310 120 aa7.31□□□□□ -1.24
CDC42-202ENST00000344548 FP248Q71RG6 208 aaPredicted RBP7.3□□□□□ -1.24
CDC42-202ENST00000344548 IGKV2D-30A0A075B6S6 120 aa7.29□□□□□ -1.24
CDC42-202ENST00000344548 LPAP08519 4548 aa7.29□□□□□ -1.24
CDC42-202ENST00000344548 ATP5EP56381 51 aaPredicted RBP7.27□□□□□ -1.25
CDC42-202ENST00000344548 SPANXA2-OT1Q8N9U9 137 aa7.27□□□□□ -1.25
CDC42-202ENST00000344548 SERP1Q9Y6X1 66 aa7.26□□□□□ -1.25
CDC42-202ENST00000344548 HRES1P13985 223 aa7.25□□□□□ -1.25
CDC42-202ENST00000344548 XP32Q5T750 250 aa7.25□□□□□ -1.25
CDC42-202ENST00000344548 Q75L30 129 aa7.24□□□□□ -1.25
CDC42-202ENST00000344548 LRP2P98164 4655 aa7.23□□□□□ -1.25
CDC42-202ENST00000344548 C4orf26Q17RF5 130 aa7.2□□□□□ -1.26
CDC42-202ENST00000344548 PCLOQ9Y6V0 5065 aa7.18□□□□□ -1.26
CDC42-202ENST00000344548 J3QL48 77 aa7.18□□□□□ -1.26
CDC42-202ENST00000344548 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
CDC42-202ENST00000344548 C7orf65Q6ZTY9 151 aa7.17□□□□□ -1.26
CDC42-202ENST00000344548 SPINK7P58062 85 aa7.16□□□□□ -1.26
CDC42-202ENST00000344548 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
CDC42-202ENST00000344548 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
CDC42-202ENST00000344548 COA5Q86WW8 74 aa7.13□□□□□ -1.27
CDC42-202ENST00000344548 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
CDC42-202ENST00000344548 SMIM26A0A096LP01 95 aa7.08□□□□□ -1.28
CDC42-202ENST00000344548 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
CDC42-202ENST00000344548 HERC1Q15751 4861 aa7.08□□□□□ -1.28
CDC42-202ENST00000344548 MPLKIPQ8TAP9 179 aa7.06□□□□□ -1.28
CDC42-202ENST00000344548 ACYP2P14621 99 aa7.04□□□□□ -1.28
CDC42-202ENST00000344548 PMAIP1Q13794 54 aa6.96□□□□□ -1.3
CDC42-202ENST00000344548 COX6B2Q6YFQ2 88 aa6.95□□□□□ -1.3
CDC42-202ENST00000344548 Q1T7F1 81 aa6.94□□□□□ -1.3
CDC42-202ENST00000344548 CHKB-CPT1BH3BT56 60 aa6.93□□□□□ -1.3
CDC42-202ENST00000344548 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
CDC42-202ENST00000344548 HMCN2Q8NDA2 5059 aa6.92□□□□□ -1.3
CDC42-202ENST00000344548 A8MUN3 132 aa6.92□□□□□ -1.3
CDC42-202ENST00000344548 BRK1Q8WUW1 75 aa6.92□□□□□ -1.3
CDC42-202ENST00000344548 PSPHP1O15172 72 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms