RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 SMG1Q96Q15 3661 aaKnown RBP8.77□□□□□ -1.01
RRP1B-201ENST00000340648 CRYBG3Q68DQ2 2970 aa8.76□□□□□ -1.01
RRP1B-201ENST00000340648 DCHS2Q6V1P9 2916 aa8.76□□□□□ -1.01
RRP1B-201ENST00000340648 NIPBLQ6KC79 2804 aaeCLIP8.75□□□□□ -1.012e-7■□□□□ 9.3
RRP1B-201ENST00000340648 STAB2Q8WWQ8 2551 aa8.72□□□□□ -1.01
RRP1B-201ENST00000340648 A6NN06 94 aa8.71□□□□□ -1.02
RRP1B-201ENST00000340648 MXRA5Q9NR99 2828 aa8.68□□□□□ -1.02
RRP1B-201ENST00000340648 H3BS24 57 aa8.66□□□□□ -1.02
RRP1B-201ENST00000340648 MUC3AQ02505 3323 aa8.66□□□□□ -1.02
RRP1B-201ENST00000340648 KRTAP10-2P60368 255 aa8.63□□□□□ -1.03
RRP1B-201ENST00000340648 KRTAP13-1Q8IUC0 172 aa8.6□□□□□ -1.03
RRP1B-201ENST00000340648 KRTAP10-1P60331 282 aa8.59□□□□□ -1.03
RRP1B-201ENST00000340648 SPATA8Q6RVD6 105 aa8.59□□□□□ -1.03
RRP1B-201ENST00000340648 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
RRP1B-201ENST00000340648 ADM2Q7Z4H4 148 aa8.56□□□□□ -1.04
RRP1B-201ENST00000340648 SVEP1Q4LDE5 3571 aa8.55□□□□□ -1.04
RRP1B-201ENST00000340648 ASB16-AS1Q495Z4 193 aa8.52□□□□□ -1.05
RRP1B-201ENST00000340648 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
RRP1B-201ENST00000340648 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
RRP1B-201ENST00000340648 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
RRP1B-201ENST00000340648 KMT2BQ9UMN6 2715 aaPredicted RBP8.48□□□□□ -1.05
RRP1B-201ENST00000340648 S4R3F8 94 aa8.45□□□□□ -1.06
RRP1B-201ENST00000340648 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
RRP1B-201ENST00000340648 RPL37P61927 97 aaKnown RBP8.43□□□□□ -1.06
RRP1B-201ENST00000340648 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
RRP1B-201ENST00000340648 ROMO1P60602 79 aa8.42□□□□□ -1.06
RRP1B-201ENST00000340648 Q6ZSA8 131 aa8.4□□□□□ -1.06
RRP1B-201ENST00000340648 J3QL48 77 aa8.36□□□□□ -1.07
RRP1B-201ENST00000340648 TENM3Q9P273 2699 aa8.35□□□□□ -1.07
RRP1B-201ENST00000340648 CUBNO60494 3623 aa8.35□□□□□ -1.07
RRP1B-201ENST00000340648 SPENQ96T58 3664 aaKnown RBP8.33□□□□□ -1.08
RRP1B-201ENST00000340648 KRTAP25-1Q3LHN0 102 aa8.31□□□□□ -1.08
RRP1B-201ENST00000340648 FLG2Q5D862 2391 aaPredicted RBP8.27□□□□□ -1.09
RRP1B-201ENST00000340648 LUZP6Q538Z0 58 aa8.27□□□□□ -1.09
RRP1B-201ENST00000340648 CAMK2N1Q7Z7J9 78 aa8.25□□□□□ -1.09
RRP1B-201ENST00000340648 R4GN34 69 aa8.21□□□□□ -1.1
RRP1B-201ENST00000340648 TENM1Q9UKZ4 2725 aa8.21□□□□□ -1.1
RRP1B-201ENST00000340648 TENM4Q6N022 2769 aa8.19□□□□□ -1.1
RRP1B-201ENST00000340648 RPS29P62273 56 aaKnown RBP8.19□□□□□ -1.1
RRP1B-201ENST00000340648 VWFP04275 2813 aa8.18□□□□□ -1.1
RRP1B-201ENST00000340648 Q5VSD8 79 aa8.17□□□□□ -1.1
RRP1B-201ENST00000340648 PDZD2O15018 2839 aa8.15□□□□□ -1.1
RRP1B-201ENST00000340648 M0QZ58 72 aa8.14□□□□□ -1.11
RRP1B-201ENST00000340648 BSNQ9UPA5 3926 aa8.08□□□□□ -1.12
RRP1B-201ENST00000340648 KRTAP1-4P0C5Y4 121 aa8.06□□□□□ -1.12
RRP1B-201ENST00000340648 A8MUU9 505 aa8.06□□□□□ -1.12
RRP1B-201ENST00000340648 TGP01266 2768 aa8.05□□□□□ -1.12
RRP1B-201ENST00000340648 KRTAP16-1A8MUX0 517 aa8.04□□□□□ -1.12
RRP1B-201ENST00000340648 H0YAA0 97 aa8.04□□□□□ -1.12
RRP1B-201ENST00000340648 NBPF19A0A087WUL8 3843 aa8.03□□□□□ -1.12
RRP1B-201ENST00000340648 C20orf166-AS1Q96NR2 134 aa8.03□□□□□ -1.12
RRP1B-201ENST00000340648 FBN1P35555 2871 aaKnown RBP8.02□□□□□ -1.13
RRP1B-201ENST00000340648 KRTAP13-3Q3SY46 172 aa8.01□□□□□ -1.13
RRP1B-201ENST00000340648 CSMD2Q7Z408 3487 aa8.01□□□□□ -1.13
RRP1B-201ENST00000340648 NDUFAF8A1L188 74 aa7.97□□□□□ -1.13
RRP1B-201ENST00000340648 PKD1L1Q8TDX9 2849 aa7.97□□□□□ -1.13
RRP1B-201ENST00000340648 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
RRP1B-201ENST00000340648 A0A0A0MQY5 61 aa7.94□□□□□ -1.14
RRP1B-201ENST00000340648 OTOGQ6ZRI0 2925 aa7.89□□□□□ -1.15
RRP1B-201ENST00000340648 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
RRP1B-201ENST00000340648 M0R2T5 61 aa7.86□□□□□ -1.15
RRP1B-201ENST00000340648 ANK3Q12955 4377 aaKnown RBP7.84□□□□□ -1.15
RRP1B-201ENST00000340648 TENM2Q9NT68 2774 aa7.79□□□□□ -1.16
RRP1B-201ENST00000340648 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
RRP1B-201ENST00000340648 VPS13CQ709C8 3753 aa7.78□□□□□ -1.16
RRP1B-201ENST00000340648 SRRM2Q9UQ35 2752 aaKnown RBP7.78□□□□□ -1.16
RRP1B-201ENST00000340648 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
RRP1B-201ENST00000340648 XP32Q5T750 250 aa7.73□□□□□ -1.17
RRP1B-201ENST00000340648 P0C880 135 aa7.68□□□□□ -1.18
RRP1B-201ENST00000340648 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
RRP1B-201ENST00000340648 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
RRP1B-201ENST00000340648 KRTAP3-1Q9BYR8 98 aa7.55□□□□□ -1.2
RRP1B-201ENST00000340648 MEGF8Q7Z7M0 2845 aa7.48□□□□□ -1.21
RRP1B-201ENST00000340648 TNP1P09430 55 aa7.48□□□□□ -1.21
RRP1B-201ENST00000340648 KRTAP12-2P59991 146 aa7.47□□□□□ -1.21
RRP1B-201ENST00000340648 KRTAP10-8P60410 259 aa7.45□□□□□ -1.22
RRP1B-201ENST00000340648 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
RRP1B-201ENST00000340648 ZNF469Q96JG9 3925 aaPredicted RBP7.42□□□□□ -1.22
RRP1B-201ENST00000340648 PP632Q6XCG6 107 aa7.41□□□□□ -1.22
RRP1B-201ENST00000340648 AKAP9Q99996 3911 aa7.38□□□□□ -1.23
RRP1B-201ENST00000340648 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
RRP1B-201ENST00000340648 CSMD3Q7Z407 3707 aa7.35□□□□□ -1.23
RRP1B-201ENST00000340648 A0A1B0GVY2 172 aa7.35□□□□□ -1.23
RRP1B-201ENST00000340648 KRTAP21-3Q3LHN1 58 aa7.34□□□□□ -1.23
RRP1B-201ENST00000340648 HUWE1Q7Z6Z7 4374 aaKnown RBP7.34□□□□□ -1.23
RRP1B-201ENST00000340648 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
RRP1B-201ENST00000340648 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
RRP1B-201ENST00000340648 COL7A1Q02388 2944 aa7.3□□□□□ -1.24
RRP1B-201ENST00000340648 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
RRP1B-201ENST00000340648 KRTAP3-3Q9BYR6 98 aa7.1□□□□□ -1.27
RRP1B-201ENST00000340648 DNAH10Q8IVF4 4471 aa7.03□□□□□ -1.28
RRP1B-201ENST00000340648 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.29
RRP1B-201ENST00000340648 DNAH9Q9NYC9 4486 aa6.97□□□□□ -1.29
RRP1B-201ENST00000340648 KRTAP10-10P60014 251 aa6.97□□□□□ -1.29
RRP1B-201ENST00000340648 PLECQ15149 4684 aaKnown RBP6.94□□□□□ -1.3
RRP1B-201ENST00000340648 KRTAP10-4P60372 401 aaPredicted RBP6.93□□□□□ -1.3
RRP1B-201ENST00000340648 DNAH1Q9P2D7 4330 aa6.93□□□□□ -1.3
RRP1B-201ENST00000340648 MT1HL1P0DM35 61 aa6.85□□□□□ -1.31
RRP1B-201ENST00000340648 DNAH11Q96DT5 4516 aa6.83□□□□□ -1.32
RRP1B-201ENST00000340648 DNAH5Q8TE73 4624 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms