RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 RPS29P62273 56 aaKnown RBP12.06□□□□□ -0.48
VRK2-201ENST00000340157 SERP2Q8N6R1 65 aa12.05□□□□□ -0.48
VRK2-201ENST00000340157 FLG2Q5D862 2391 aaPredicted RBP12.04□□□□□ -0.48
VRK2-201ENST00000340157 IGHV6-1A0A0B4J1U7 121 aa12.04□□□□□ -0.48
VRK2-201ENST00000340157 CCDC179H3BU77 68 aa12.04□□□□□ -0.48
VRK2-201ENST00000340157 NOTCH2NLQ7Z3S9 236 aa12.04□□□□□ -0.48
VRK2-201ENST00000340157 KRTAP10-8P60410 259 aa12.02□□□□□ -0.48
VRK2-201ENST00000340157 COX7CP15954 63 aa12.02□□□□□ -0.49
VRK2-201ENST00000340157 OCR1Q9BZK8 76 aa12.02□□□□□ -0.49
VRK2-201ENST00000340157 C8orf17Q9NRJ1 99 aa12.02□□□□□ -0.49
VRK2-201ENST00000340157 CASC2Q6XLA1 102 aa12.01□□□□□ -0.49
VRK2-201ENST00000340157 MYCBP2O75592 4640 aa12□□□□□ -0.49
VRK2-201ENST00000340157 TRAV7A0A075B6U4 112 aa12□□□□□ -0.49
VRK2-201ENST00000340157 SMIM20Q8N5G0 67 aa11.98□□□□□ -0.49
VRK2-201ENST00000340157 KRTAP4-5Q9BYR2 181 aa11.97□□□□□ -0.49
VRK2-201ENST00000340157 hDV103S1A0JD37 113 aa11.96□□□□□ -0.49
VRK2-201ENST00000340157 UQCRQO14949 82 aa11.96□□□□□ -0.49
VRK2-201ENST00000340157 BIRC6Q9NR09 4857 aa11.92□□□□□ -0.5
VRK2-201ENST00000340157 MT1HL1P0DM35 61 aa11.9□□□□□ -0.5
VRK2-201ENST00000340157 C8orf87E5RJ46 101 aa11.87□□□□□ -0.51
VRK2-201ENST00000340157 TMEM254Q8TBM7 123 aa11.86□□□□□ -0.51
VRK2-201ENST00000340157 MRPL34Q9BQ48 92 aaKnown RBP11.85□□□□□ -0.51
VRK2-201ENST00000340157 CYSTM1Q9H1C7 97 aa11.85□□□□□ -0.51
VRK2-201ENST00000340157 LINC00313P59037 77 aa11.84□□□□□ -0.51
VRK2-201ENST00000340157 RETNLBQ9BQ08 111 aa11.84□□□□□ -0.51
VRK2-201ENST00000340157 C20orf197Q8N268 126 aa11.83□□□□□ -0.52
VRK2-201ENST00000340157 DMBT1Q9UGM3 2413 aaPredicted RBP11.81□□□□□ -0.52
VRK2-201ENST00000340157 KRTAP16-1A8MUX0 517 aa11.81□□□□□ -0.52
VRK2-201ENST00000340157 HERC2O95714 4834 aa11.8□□□□□ -0.52
VRK2-201ENST00000340157 ABCA13Q86UQ4 5058 aa11.78□□□□□ -0.52
VRK2-201ENST00000340157 SNURFQ9Y675 71 aa11.76□□□□□ -0.53
VRK2-201ENST00000340157 NDUFS5O43920 106 aa11.74□□□□□ -0.53
VRK2-201ENST00000340157 KLKP1Q107X0 134 aa11.74□□□□□ -0.53
VRK2-201ENST00000340157 A0A0U1RQV1 116 aa11.74□□□□□ -0.53
VRK2-201ENST00000340157 OXTP01178 125 aa11.74□□□□□ -0.53
VRK2-201ENST00000340157 C5orf47Q569G3 176 aa11.73□□□□□ -0.53
VRK2-201ENST00000340157 Q8N9P0 234 aaPredicted RBP11.72□□□□□ -0.53
VRK2-201ENST00000340157 TP53AIP1Q9HCN2 124 aa11.72□□□□□ -0.53
VRK2-201ENST00000340157 H0Y9P7 68 aa11.68□□□□□ -0.54
VRK2-201ENST00000340157 TRAV22A0A0B4J277 110 aa11.67□□□□□ -0.54
VRK2-201ENST00000340157 ZCCHC13Q8WW36 166 aaKnown RBP11.67□□□□□ -0.54
VRK2-201ENST00000340157 C9orf92A6NGG3 77 aa11.66□□□□□ -0.54
VRK2-201ENST00000340157 Q5W150 140 aa11.65□□□□□ -0.54
VRK2-201ENST00000340157 KRTAP13-3Q3SY46 172 aa11.63□□□□□ -0.55
VRK2-201ENST00000340157 H7BZZ5 65 aa11.63□□□□□ -0.55
VRK2-201ENST00000340157 MP68P56378 58 aa11.63□□□□□ -0.55
VRK2-201ENST00000340157 LINC00208Q96KT6 92 aa11.61□□□□□ -0.55
VRK2-201ENST00000340157 FP248Q71RG6 208 aaPredicted RBP11.59□□□□□ -0.55
VRK2-201ENST00000340157 H3BPC8 53 aa11.57□□□□□ -0.56
VRK2-201ENST00000340157 C1orf64Q8NEQ6 169 aa11.56□□□□□ -0.56
VRK2-201ENST00000340157 NDUFC1O43677 76 aa11.53□□□□□ -0.56
VRK2-201ENST00000340157 C20orf166-AS1Q96NR2 134 aa11.53□□□□□ -0.56
VRK2-201ENST00000340157 IGLV7-46A0A075B6I9 117 aa11.52□□□□□ -0.57
VRK2-201ENST00000340157 A8MUU9 505 aa11.51□□□□□ -0.57
VRK2-201ENST00000340157 TMEM258P61165 79 aa11.51□□□□□ -0.57
VRK2-201ENST00000340157 PRR4Q16378 134 aa11.44□□□□□ -0.58
VRK2-201ENST00000340157 LOC101927531A0A1B0GV80 90 aa11.41□□□□□ -0.58
VRK2-201ENST00000340157 J3QL48 77 aa11.41□□□□□ -0.58
VRK2-201ENST00000340157 Q75L30 129 aa11.4□□□□□ -0.58
VRK2-201ENST00000340157 FAM236DA0A1B0GTK5 79 aa11.4□□□□□ -0.59
VRK2-201ENST00000340157 FAM236CP0DP71 79 aa11.4□□□□□ -0.59
VRK2-201ENST00000340157 CYP4F30PQ9H0H9 118 aa11.39□□□□□ -0.59
VRK2-201ENST00000340157 PCOTHQ58A44 107 aa11.38□□□□□ -0.59
VRK2-201ENST00000340157 PCLOQ9Y6V0 5065 aa11.38□□□□□ -0.59
VRK2-201ENST00000340157 IGKV2-30P06310 120 aa11.38□□□□□ -0.59
VRK2-201ENST00000340157 XP32Q5T750 250 aa11.38□□□□□ -0.59
VRK2-201ENST00000340157 TPRXLQ17RH7 258 aa11.32□□□□□ -0.6
VRK2-201ENST00000340157 LPAP08519 4548 aa11.31□□□□□ -0.6
VRK2-201ENST00000340157 IGKV2D-30A0A075B6S6 120 aa11.3□□□□□ -0.6
VRK2-201ENST00000340157 RPL37P61927 97 aaKnown RBP11.29□□□□□ -0.6
VRK2-201ENST00000340157 ATP5EP56381 51 aaPredicted RBP11.28□□□□□ -0.6
VRK2-201ENST00000340157 SPANXA2-OT1Q8N9U9 137 aa11.28□□□□□ -0.6
VRK2-201ENST00000340157 LRP2P98164 4655 aa11.25□□□□□ -0.61
VRK2-201ENST00000340157 C7orf65Q6ZTY9 151 aa11.22□□□□□ -0.61
VRK2-201ENST00000340157 HRES1P13985 223 aa11.21□□□□□ -0.61
VRK2-201ENST00000340157 ATP11AUNQ6ZP68 121 aa11.19□□□□□ -0.62
VRK2-201ENST00000340157 SPINK7P58062 85 aa11.15□□□□□ -0.63
VRK2-201ENST00000340157 SERP1Q9Y6X1 66 aa11.15□□□□□ -0.63
VRK2-201ENST00000340157 RPS28P62857 69 aaKnown RBP11.13□□□□□ -0.63
VRK2-201ENST00000340157 HERC1Q15751 4861 aa11.12□□□□□ -0.63
VRK2-201ENST00000340157 DMAC1Q96GE9 116 aa11.04□□□□□ -0.64
VRK2-201ENST00000340157 C4orf26Q17RF5 130 aa11.03□□□□□ -0.64
VRK2-201ENST00000340157 COA5Q86WW8 74 aa10.98□□□□□ -0.65
VRK2-201ENST00000340157 HMCN2Q8NDA2 5059 aa10.97□□□□□ -0.65
VRK2-201ENST00000340157 KRTAP3-1Q9BYR8 98 aa10.94□□□□□ -0.66
VRK2-201ENST00000340157 ACYP2P14621 99 aa10.92□□□□□ -0.66
VRK2-201ENST00000340157 SEC61BP60468 96 aaKnown RBP10.87□□□□□ -0.67
VRK2-201ENST00000340157 COX6B2Q6YFQ2 88 aa10.85□□□□□ -0.67
VRK2-201ENST00000340157 A8MUN3 132 aa10.85□□□□□ -0.67
VRK2-201ENST00000340157 SMIM26A0A096LP01 95 aa10.84□□□□□ -0.67
VRK2-201ENST00000340157 MUC17Q685J3 4493 aa10.84□□□□□ -0.67
VRK2-201ENST00000340157 KRTAP4-1Q9BYQ7 146 aa10.81□□□□□ -0.68
VRK2-201ENST00000340157 MPLKIPQ8TAP9 179 aa10.78□□□□□ -0.68
VRK2-201ENST00000340157 CHKB-CPT1BH3BT56 60 aa10.74□□□□□ -0.69
VRK2-201ENST00000340157 Q1T7F1 81 aa10.66□□□□□ -0.7
VRK2-201ENST00000340157 RBM12B-AS1Q9P1G2 102 aa10.61□□□□□ -0.71
VRK2-201ENST00000340157 MUC2Q02817 5179 aa10.61□□□□□ -0.71
VRK2-201ENST00000340157 H1FX-AS1Q4G0G2 97 aa10.57□□□□□ -0.72
VRK2-201ENST00000340157 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
VRK2-201ENST00000340157 LINC01558Q9Y6Z2 57 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms