RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 LINC00208Q96KT6 92 aa8.92□□□□□ -0.98
MBD1-203ENST00000339998 NDUFS5O43920 106 aa8.91□□□□□ -0.98
MBD1-203ENST00000339998 PRR4Q16378 134 aa8.91□□□□□ -0.98
MBD1-203ENST00000339998 C5orf47Q569G3 176 aa8.89□□□□□ -0.99
MBD1-203ENST00000339998 H0Y9P7 68 aa8.88□□□□□ -0.99
MBD1-203ENST00000339998 ZCCHC13Q8WW36 166 aaKnown RBP8.88□□□□□ -0.99
MBD1-203ENST00000339998 TYMSOSQ8TAI1 123 aa8.88□□□□□ -0.99
MBD1-203ENST00000339998 FAM229BQ4G0N7 80 aa8.88□□□□□ -0.99
MBD1-203ENST00000339998 LRP1Q07954 4544 aaKnown RBP8.87□□□□□ -0.99
MBD1-203ENST00000339998 CD164Q04900 197 aa8.87□□□□□ -0.99
MBD1-203ENST00000339998 C1orf195Q5TG92 126 aa8.87□□□□□ -0.99
MBD1-203ENST00000339998 ASB16-AS1Q495Z4 193 aa8.85□□□□□ -0.99
MBD1-203ENST00000339998 NDUFC1O43677 76 aa8.85□□□□□ -0.99
MBD1-203ENST00000339998 MP68P56378 58 aa8.84□□□□□ -0.99
MBD1-203ENST00000339998 KRTAP10-4P60372 401 aaPredicted RBP8.84□□□□□ -0.99
MBD1-203ENST00000339998 MRPL34Q9BQ48 92 aaKnown RBP8.83□□□□□ -1
MBD1-203ENST00000339998 HSPG2P98160 4391 aa8.82□□□□□ -1
MBD1-203ENST00000339998 FLG2Q5D862 2391 aaPredicted RBP8.81□□□□□ -1
MBD1-203ENST00000339998 C1orf64Q8NEQ6 169 aa8.81□□□□□ -1
MBD1-203ENST00000339998 PKHD1L1Q86WI1 4243 aa8.8□□□□□ -1
MBD1-203ENST00000339998 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
MBD1-203ENST00000339998 RETNLBQ9BQ08 111 aa8.8□□□□□ -1
MBD1-203ENST00000339998 KIAA1109Q2LD37 5005 aa8.8□□□□□ -1
MBD1-203ENST00000339998 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
MBD1-203ENST00000339998 Q5W150 140 aa8.79□□□□□ -1
MBD1-203ENST00000339998 RPS28P62857 69 aaKnown RBP8.78□□□□□ -1
MBD1-203ENST00000339998 PCOTHQ58A44 107 aa8.78□□□□□ -1
MBD1-203ENST00000339998 EPPK1P58107 5090 aaKnown RBP8.76□□□□□ -1.01
MBD1-203ENST00000339998 LINC00313P59037 77 aa8.75□□□□□ -1.01
MBD1-203ENST00000339998 SERP1Q9Y6X1 66 aa8.75□□□□□ -1.01
MBD1-203ENST00000339998 LINC00304Q8N9R0 145 aa8.74□□□□□ -1.01
MBD1-203ENST00000339998 KRTAP17-1Q9BYP8 105 aa8.74□□□□□ -1.01
MBD1-203ENST00000339998 RYR1P21817 5038 aa8.73□□□□□ -1.01
MBD1-203ENST00000339998 Q5XG85 94 aa8.72□□□□□ -1.01
MBD1-203ENST00000339998 LIMD2Q9BT23 127 aa8.71□□□□□ -1.01
MBD1-203ENST00000339998 SPINK1P00995 79 aa8.71□□□□□ -1.02
MBD1-203ENST00000339998 TP53AIP1Q9HCN2 124 aa8.7□□□□□ -1.02
MBD1-203ENST00000339998 MYCBP2O75592 4640 aa8.7□□□□□ -1.02
MBD1-203ENST00000339998 DMBT1Q9UGM3 2413 aaPredicted RBP8.7□□□□□ -1.02
MBD1-203ENST00000339998 C4orf26Q17RF5 130 aa8.67□□□□□ -1.02
MBD1-203ENST00000339998 ATP5EP56381 51 aaPredicted RBP8.66□□□□□ -1.02
MBD1-203ENST00000339998 KRTAP16-1A8MUX0 517 aa8.66□□□□□ -1.02
MBD1-203ENST00000339998 FP248Q71RG6 208 aaPredicted RBP8.66□□□□□ -1.02
MBD1-203ENST00000339998 C8orf87E5RJ46 101 aa8.65□□□□□ -1.02
MBD1-203ENST00000339998 TNXBP22105 4242 aa8.65□□□□□ -1.02
MBD1-203ENST00000339998 H3BPC8 53 aa8.64□□□□□ -1.03
MBD1-203ENST00000339998 KRTAP13-3Q3SY46 172 aa8.64□□□□□ -1.03
MBD1-203ENST00000339998 Q5VSD8 79 aa8.63□□□□□ -1.03
MBD1-203ENST00000339998 MPLKIPQ8TAP9 179 aa8.62□□□□□ -1.03
MBD1-203ENST00000339998 C9orf92A6NGG3 77 aa8.62□□□□□ -1.03
MBD1-203ENST00000339998 Q8N9P0 234 aaPredicted RBP8.62□□□□□ -1.03
MBD1-203ENST00000339998 FAM229AH3BQW9 127 aa8.6□□□□□ -1.03
MBD1-203ENST00000339998 Q8N1X5 172 aa8.58□□□□□ -1.04
MBD1-203ENST00000339998 CYP4F30PQ9H0H9 118 aa8.58□□□□□ -1.04
MBD1-203ENST00000339998 FAT3Q8TDW7 4589 aa8.56□□□□□ -1.04
MBD1-203ENST00000339998 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
MBD1-203ENST00000339998 SMIM26A0A096LP01 95 aa8.56□□□□□ -1.04
MBD1-203ENST00000339998 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
MBD1-203ENST00000339998 SPANXA2-OT1Q8N9U9 137 aa8.53□□□□□ -1.04
MBD1-203ENST00000339998 IGKV2D-30A0A075B6S6 120 aa8.52□□□□□ -1.05
MBD1-203ENST00000339998 IGKV2-30P06310 120 aa8.52□□□□□ -1.05
MBD1-203ENST00000339998 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
MBD1-203ENST00000339998 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
MBD1-203ENST00000339998 HRES1P13985 223 aa8.47□□□□□ -1.05
MBD1-203ENST00000339998 COA5Q86WW8 74 aa8.47□□□□□ -1.05
MBD1-203ENST00000339998 KRTAP10-8P60410 259 aa8.45□□□□□ -1.06
MBD1-203ENST00000339998 PSPHP1O15172 72 aa8.41□□□□□ -1.06
MBD1-203ENST00000339998 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
MBD1-203ENST00000339998 ABCA13Q86UQ4 5058 aa8.37□□□□□ -1.07
MBD1-203ENST00000339998 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
MBD1-203ENST00000339998 A8MUN3 132 aa8.33□□□□□ -1.08
MBD1-203ENST00000339998 A8MUU9 505 aa8.33□□□□□ -1.08
MBD1-203ENST00000339998 C20orf166-AS1Q96NR2 134 aa8.33□□□□□ -1.08
MBD1-203ENST00000339998 Q1T7F1 81 aa8.31□□□□□ -1.08
MBD1-203ENST00000339998 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
MBD1-203ENST00000339998 LPAP08519 4548 aa8.28□□□□□ -1.08
MBD1-203ENST00000339998 C7orf65Q6ZTY9 151 aa8.27□□□□□ -1.09
MBD1-203ENST00000339998 ACYP2P14621 99 aa8.26□□□□□ -1.09
MBD1-203ENST00000339998 LRP2P98164 4655 aa8.26□□□□□ -1.09
MBD1-203ENST00000339998 PRR15LQ9BU68 103 aa8.25□□□□□ -1.09
MBD1-203ENST00000339998 BRK1Q8WUW1 75 aa8.23□□□□□ -1.09
MBD1-203ENST00000339998 SPINK7P58062 85 aa8.22□□□□□ -1.09
MBD1-203ENST00000339998 CHKB-CPT1BH3BT56 60 aa8.22□□□□□ -1.09
MBD1-203ENST00000339998 Q5VV11 94 aa8.21□□□□□ -1.09
MBD1-203ENST00000339998 A8MU10 97 aa8.2□□□□□ -1.1
MBD1-203ENST00000339998 HERC2O95714 4834 aa8.2□□□□□ -1.1
MBD1-203ENST00000339998 Q75L30 129 aa8.19□□□□□ -1.1
MBD1-203ENST00000339998 XP32Q5T750 250 aa8.18□□□□□ -1.1
MBD1-203ENST00000339998 KRTAP3-1Q9BYR8 98 aa8.16□□□□□ -1.1
MBD1-203ENST00000339998 V9GYY9 64 aa8.14□□□□□ -1.11
MBD1-203ENST00000339998 ATP11AUNQ6ZP68 121 aa8.13□□□□□ -1.11
MBD1-203ENST00000339998 LINC01558Q9Y6Z2 57 aa8.12□□□□□ -1.11
MBD1-203ENST00000339998 RPL37P61927 97 aaKnown RBP8.1□□□□□ -1.11
MBD1-203ENST00000339998 BIRC6Q9NR09 4857 aa8.07□□□□□ -1.12
MBD1-203ENST00000339998 A6NED7 52 aa8.03□□□□□ -1.12
MBD1-203ENST00000339998 PRO0628Q9UI54 55 aa8.03□□□□□ -1.12
MBD1-203ENST00000339998 LCA10Q71F78 164 aa7.99□□□□□ -1.13
MBD1-203ENST00000339998 A0A1B0GU69 56 aa7.97□□□□□ -1.13
MBD1-203ENST00000339998 COX6B2Q6YFQ2 88 aa7.97□□□□□ -1.13
MBD1-203ENST00000339998 PCLOQ9Y6V0 5065 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms