RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 UNC79Q9P2D8 2635 aa8.87□□□□□ -0.99
SATB1-201ENST00000338745 PP632Q6XCG6 107 aa8.87□□□□□ -0.99
SATB1-201ENST00000338745 XP32Q5T750 250 aa8.82□□□□□ -1
SATB1-201ENST00000338745 TEP1Q99973 2627 aaKnown RBP8.81□□□□□ -1
SATB1-201ENST00000338745 BOD1L1Q8NFC6 3051 aa8.8□□□□□ -1
SATB1-201ENST00000338745 ITPR2Q14571 2701 aa8.8□□□□□ -1
SATB1-201ENST00000338745 P0C880 135 aa8.8□□□□□ -1
SATB1-201ENST00000338745 COL6A5A8TX70 2615 aa8.77□□□□□ -1.01
SATB1-201ENST00000338745 ASH1LQ9NR48 2969 aaKnown RBP8.74□□□□□ -1.01
SATB1-201ENST00000338745 SETXQ7Z333 2677 aaKnown RBP8.72□□□□□ -1.01
SATB1-201ENST00000338745 KRTAP1-4P0C5Y4 121 aa8.72□□□□□ -1.01
SATB1-201ENST00000338745 FLNBO75369 2602 aaKnown RBP8.69□□□□□ -1.02
SATB1-201ENST00000338745 EYSQ5T1H1 3165 aa8.67□□□□□ -1.02
SATB1-201ENST00000338745 CRYBG3Q68DQ2 2970 aa8.67□□□□□ -1.02
SATB1-201ENST00000338745 CSMD1Q96PZ7 3565 aa8.66□□□□□ -1.02
SATB1-201ENST00000338745 NBEAQ8NFP9 2946 aa8.64□□□□□ -1.03
SATB1-201ENST00000338745 ADGRG4Q8IZF6 3080 aa8.63□□□□□ -1.03
SATB1-201ENST00000338745 MAP1AP78559 2803 aaPredicted RBP8.63□□□□□ -1.03
SATB1-201ENST00000338745 LOC400499M0QZD8 3231 aa8.6□□□□□ -1.03
SATB1-201ENST00000338745 LAMA5O15230 3695 aa8.6□□□□□ -1.03
SATB1-201ENST00000338745 ZNF292O60281 2723 aa8.59□□□□□ -1.03
SATB1-201ENST00000338745 KRTAP10-10P60014 251 aa8.59□□□□□ -1.03
SATB1-201ENST00000338745 UTP20O75691 2785 aaKnown RBP8.58□□□□□ -1.04
SATB1-201ENST00000338745 ATMQ13315 3056 aa8.57□□□□□ -1.04
SATB1-201ENST00000338745 DMXL2Q8TDJ6 3036 aa8.57□□□□□ -1.04
SATB1-201ENST00000338745 ZFHX4Q86UP3 3567 aa8.56□□□□□ -1.04
SATB1-201ENST00000338745 ITPR1Q14643 2758 aa8.56□□□□□ -1.04
SATB1-201ENST00000338745 TACC2O95359 2948 aa8.55□□□□□ -1.04
SATB1-201ENST00000338745 STAB1Q9NY15 2570 aa8.55□□□□□ -1.04
SATB1-201ENST00000338745 COL12A1Q99715 3063 aa8.52□□□□□ -1.05
SATB1-201ENST00000338745 STAB2Q8WWQ8 2551 aa8.51□□□□□ -1.05
SATB1-201ENST00000338745 NSD1Q96L73 2696 aaPredicted RBP8.51□□□□□ -1.05
SATB1-201ENST00000338745 TPRXLQ17RH7 258 aa8.51□□□□□ -1.05
SATB1-201ENST00000338745 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
SATB1-201ENST00000338745 PRO2289Q9P1D8 64 aa8.49□□□□□ -1.05
SATB1-201ENST00000338745 KRTAP12-2P59991 146 aa8.49□□□□□ -1.05
SATB1-201ENST00000338745 UBR5O95071 2799 aaPredicted RBP8.49□□□□□ -1.05
SATB1-201ENST00000338745 NBPF19A0A087WUL8 3843 aa8.49□□□□□ -1.05
SATB1-201ENST00000338745 TNRC18O15417 2968 aaPredicted RBP8.48□□□□□ -1.05
SATB1-201ENST00000338745 BAHCC1Q9P281 2608 aa8.47□□□□□ -1.05
SATB1-201ENST00000338745 IGSF10Q6WRI0 2623 aa8.44□□□□□ -1.06
SATB1-201ENST00000338745 HIVEP1P15822 2718 aa8.43□□□□□ -1.06
SATB1-201ENST00000338745 KRTAP13-3Q3SY46 172 aa8.42□□□□□ -1.06
SATB1-201ENST00000338745 DMXL1Q9Y485 3027 aa8.38□□□□□ -1.07
SATB1-201ENST00000338745 SMG1Q96Q15 3661 aaKnown RBP8.3□□□□□ -1.08
SATB1-201ENST00000338745 DMDP11532 3685 aa8.28□□□□□ -1.08
SATB1-201ENST00000338745 RELNP78509 3460 aa8.28□□□□□ -1.08
SATB1-201ENST00000338745 KRTAP21-3Q3LHN1 58 aa8.26□□□□□ -1.09
SATB1-201ENST00000338745 SPENQ96T58 3664 aaKnown RBP8.25□□□□□ -1.09
SATB1-201ENST00000338745 HRNRQ86YZ3 2850 aaPredicted RBP8.22□□□□□ -1.09
SATB1-201ENST00000338745 KRTAP13-4Q3LI77 160 aa8.22□□□□□ -1.09
SATB1-201ENST00000338745 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
SATB1-201ENST00000338745 CELSR1Q9NYQ6 3014 aa8.18□□□□□ -1.1
SATB1-201ENST00000338745 CELSR2Q9HCU4 2923 aa8.16□□□□□ -1.1
SATB1-201ENST00000338745 SVEP1Q4LDE5 3571 aa8.08□□□□□ -1.12
SATB1-201ENST00000338745 TGP01266 2768 aa8.06□□□□□ -1.12
SATB1-201ENST00000338745 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
SATB1-201ENST00000338745 DCHS2Q6V1P9 2916 aa8.02□□□□□ -1.13
SATB1-201ENST00000338745 FBN2P35556 2912 aa8.01□□□□□ -1.13
SATB1-201ENST00000338745 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
SATB1-201ENST00000338745 ZFHX3Q15911 3703 aa7.95□□□□□ -1.14
SATB1-201ENST00000338745 BSNQ9UPA5 3926 aa7.92□□□□□ -1.14
SATB1-201ENST00000338745 AKAP9Q99996 3911 aa7.89□□□□□ -1.15
SATB1-201ENST00000338745 VPS13CQ709C8 3753 aa7.88□□□□□ -1.15
SATB1-201ENST00000338745 FLNCQ14315 2725 aa7.86□□□□□ -1.15
SATB1-201ENST00000338745 ZANQ9Y493 2812 aa7.86□□□□□ -1.15
SATB1-201ENST00000338745 NF1P21359 2839 aa7.85□□□□□ -1.15
SATB1-201ENST00000338745 MXRA5Q9NR99 2828 aa7.81□□□□□ -1.16
SATB1-201ENST00000338745 TENM1Q9UKZ4 2725 aa7.8□□□□□ -1.16
SATB1-201ENST00000338745 ANK3Q12955 4377 aaKnown RBP7.78□□□□□ -1.16
SATB1-201ENST00000338745 KRTAP10-6P60371 365 aaPredicted RBP7.78□□□□□ -1.16
SATB1-201ENST00000338745 TENM4Q6N022 2769 aa7.72□□□□□ -1.17
SATB1-201ENST00000338745 CUBNO60494 3623 aa7.71□□□□□ -1.18
SATB1-201ENST00000338745 NIPBLQ6KC79 2804 aaeCLIP7.71□□□□□ -1.18
SATB1-201ENST00000338745 CRCT1Q9UGL9 99 aa7.65□□□□□ -1.18
SATB1-201ENST00000338745 TENM2Q9NT68 2774 aa7.65□□□□□ -1.18
SATB1-201ENST00000338745 INE1O15225 51 aa7.65□□□□□ -1.19
SATB1-201ENST00000338745 HUWE1Q7Z6Z7 4374 aaKnown RBP7.6□□□□□ -1.19
SATB1-201ENST00000338745 TRRAPQ9Y4A5 3859 aa7.57□□□□□ -1.2
SATB1-201ENST00000338745 CSMD2Q7Z408 3487 aa7.51□□□□□ -1.21
SATB1-201ENST00000338745 MUC3AQ02505 3323 aa7.51□□□□□ -1.21
SATB1-201ENST00000338745 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
SATB1-201ENST00000338745 TENM3Q9P273 2699 aa7.5□□□□□ -1.21
SATB1-201ENST00000338745 CSMD3Q7Z407 3707 aa7.49□□□□□ -1.21
SATB1-201ENST00000338745 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
SATB1-201ENST00000338745 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
SATB1-201ENST00000338745 PDZD2O15018 2839 aa7.46□□□□□ -1.22
SATB1-201ENST00000338745 ALMS1Q8TCU4 4167 aa7.44□□□□□ -1.22
SATB1-201ENST00000338745 VWFP04275 2813 aa7.37□□□□□ -1.23
SATB1-201ENST00000338745 LCE3AQ5TA76 89 aa7.31□□□□□ -1.24
SATB1-201ENST00000338745 PKD1L1Q8TDX9 2849 aa7.28□□□□□ -1.24
SATB1-201ENST00000338745 MEGF8Q7Z7M0 2845 aa7.27□□□□□ -1.25
SATB1-201ENST00000338745 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
SATB1-201ENST00000338745 MT1HL1P0DM35 61 aa7.25□□□□□ -1.25
SATB1-201ENST00000338745 SRRM2Q9UQ35 2752 aaKnown RBP7.18□□□□□ -1.26
SATB1-201ENST00000338745 DNAH3Q8TD57 4116 aa7.16□□□□□ -1.26
SATB1-201ENST00000338745 FBN3Q75N90 2809 aa7.16□□□□□ -1.26
SATB1-201ENST00000338745 ZNF469Q96JG9 3925 aaPredicted RBP7.15□□□□□ -1.27
SATB1-201ENST00000338745 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
SATB1-201ENST00000338745 KRTAP4-5Q9BYR2 181 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms