RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 APCP25054 2843 aa3.85□□□□□ -1.79
PBRM1-202ENST00000337303 ASH1LQ9NR48 2969 aaKnown RBP3.85□□□□□ -1.79
PBRM1-202ENST00000337303 KALRNO60229 2985 aa3.85□□□□□ -1.79
PBRM1-202ENST00000337303 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
PBRM1-202ENST00000337303 Q6ZRN7 208 aaPredicted RBP3.84□□□□□ -1.8
PBRM1-202ENST00000337303 VCANP13611 3396 aa3.84□□□□□ -1.8
PBRM1-202ENST00000337303 DMXL2Q8TDJ6 3036 aa3.83□□□□□ -1.8
PBRM1-202ENST00000337303 NIPBLQ6KC79 2804 aaeCLIP3.83□□□□□ -1.8
PBRM1-202ENST00000337303 HIVEP1P15822 2718 aa3.83□□□□□ -1.8
PBRM1-202ENST00000337303 NBEAQ8NFP9 2946 aa3.82□□□□□ -1.8
PBRM1-202ENST00000337303 PLAC4Q8WY50 150 aa3.82□□□□□ -1.8
PBRM1-202ENST00000337303 KRTAP13-2Q52LG2 175 aa3.81□□□□□ -1.8
PBRM1-202ENST00000337303 A8MUU9 505 aa3.8□□□□□ -1.8
PBRM1-202ENST00000337303 TNRC18O15417 2968 aaPredicted RBP3.79□□□□□ -1.8
PBRM1-202ENST00000337303 CRYBG3Q68DQ2 2970 aa3.78□□□□□ -1.8
PBRM1-202ENST00000337303 MUC3AQ02505 3323 aa3.77□□□□□ -1.81
PBRM1-202ENST00000337303 EYSQ5T1H1 3165 aa3.76□□□□□ -1.81
PBRM1-202ENST00000337303 FRYLO94915 3013 aa3.75□□□□□ -1.81
PBRM1-202ENST00000337303 CELSR2Q9HCU4 2923 aa3.75□□□□□ -1.81
PBRM1-202ENST00000337303 LRBAP50851 2863 aa3.75□□□□□ -1.81
PBRM1-202ENST00000337303 BOD1L1Q8NFC6 3051 aa3.75□□□□□ -1.81
PBRM1-202ENST00000337303 C20orf166-AS1Q96NR2 134 aa3.75□□□□□ -1.81
PBRM1-202ENST00000337303 ATMQ13315 3056 aa3.75□□□□□ -1.81
PBRM1-202ENST00000337303 ADGRG4Q8IZF6 3080 aa3.73□□□□□ -1.81
PBRM1-202ENST00000337303 COL12A1Q99715 3063 aa3.73□□□□□ -1.81
PBRM1-202ENST00000337303 TENM3Q9P273 2699 aa3.72□□□□□ -1.81
PBRM1-202ENST00000337303 SPEGQ15772 3267 aa3.71□□□□□ -1.82
PBRM1-202ENST00000337303 TNP1P09430 55 aa3.71□□□□□ -1.82
PBRM1-202ENST00000337303 NBPF19A0A087WUL8 3843 aa3.7□□□□□ -1.82
PBRM1-202ENST00000337303 CELSR3Q9NYQ7 3312 aa3.69□□□□□ -1.82
PBRM1-202ENST00000337303 ZFHX4Q86UP3 3567 aa3.69□□□□□ -1.82
PBRM1-202ENST00000337303 DCHS2Q6V1P9 2916 aa3.68□□□□□ -1.82
PBRM1-202ENST00000337303 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
PBRM1-202ENST00000337303 COL6A3P12111 3177 aa3.68□□□□□ -1.82
PBRM1-202ENST00000337303 ZZEF1O43149 2961 aa3.67□□□□□ -1.82
PBRM1-202ENST00000337303 H0YAA0 97 aa3.66□□□□□ -1.82
PBRM1-202ENST00000337303 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
PBRM1-202ENST00000337303 ZANQ9Y493 2812 aa3.65□□□□□ -1.83
PBRM1-202ENST00000337303 LCE2DQ5TA82 110 aaPredicted RBP3.65□□□□□ -1.83
PBRM1-202ENST00000337303 P0C880 135 aa3.64□□□□□ -1.83
PBRM1-202ENST00000337303 HRNRQ86YZ3 2850 aaPredicted RBP3.63□□□□□ -1.83
PBRM1-202ENST00000337303 PKD1L1Q8TDX9 2849 aa3.62□□□□□ -1.83
PBRM1-202ENST00000337303 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
PBRM1-202ENST00000337303 NF1P21359 2839 aa3.61□□□□□ -1.83
PBRM1-202ENST00000337303 LOC400499M0QZD8 3231 aa3.6□□□□□ -1.83
PBRM1-202ENST00000337303 TENM2Q9NT68 2774 aa3.6□□□□□ -1.83
PBRM1-202ENST00000337303 CFAP47Q6ZTR5 3102 aa3.58□□□□□ -1.84
PBRM1-202ENST00000337303 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
PBRM1-202ENST00000337303 TENM1Q9UKZ4 2725 aa3.58□□□□□ -1.84
PBRM1-202ENST00000337303 TGP01266 2768 aa3.58□□□□□ -1.84
PBRM1-202ENST00000337303 DMXL1Q9Y485 3027 aa3.58□□□□□ -1.84
PBRM1-202ENST00000337303 RELNP78509 3460 aa3.58□□□□□ -1.84
PBRM1-202ENST00000337303 XP32Q5T750 250 aa3.57□□□□□ -1.84
PBRM1-202ENST00000337303 FBN2P35556 2912 aa3.55□□□□□ -1.84
PBRM1-202ENST00000337303 ASPMQ8IZT6 3477 aa3.55□□□□□ -1.84
PBRM1-202ENST00000337303 KRTAP10-8P60410 259 aa3.54□□□□□ -1.84
PBRM1-202ENST00000337303 LAMA5O15230 3695 aa3.53□□□□□ -1.84
PBRM1-202ENST00000337303 KRTAP13-3Q3SY46 172 aa3.53□□□□□ -1.84
PBRM1-202ENST00000337303 BSNQ9UPA5 3926 aa3.51□□□□□ -1.85
PBRM1-202ENST00000337303 PDZD2O15018 2839 aa3.5□□□□□ -1.85
PBRM1-202ENST00000337303 VWFP04275 2813 aa3.48□□□□□ -1.85
PBRM1-202ENST00000337303 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
PBRM1-202ENST00000337303 CSMD1Q96PZ7 3565 aa3.47□□□□□ -1.85
PBRM1-202ENST00000337303 KRTAP21-3Q3LHN1 58 aa3.45□□□□□ -1.86
PBRM1-202ENST00000337303 CELSR1Q9NYQ6 3014 aa3.44□□□□□ -1.86
PBRM1-202ENST00000337303 KRTAP3-3Q9BYR6 98 aa3.44□□□□□ -1.86
PBRM1-202ENST00000337303 KRTAP3-2Q9BYR7 98 aa3.44□□□□□ -1.86
PBRM1-202ENST00000337303 ZNF469Q96JG9 3925 aaPredicted RBP3.44□□□□□ -1.86
PBRM1-202ENST00000337303 SMG1Q96Q15 3661 aaKnown RBP3.43□□□□□ -1.86
PBRM1-202ENST00000337303 A0A1B0GVY2 172 aa3.43□□□□□ -1.86
PBRM1-202ENST00000337303 DCHS1Q96JQ0 3298 aa3.42□□□□□ -1.86
PBRM1-202ENST00000337303 MXRA5Q9NR99 2828 aa3.42□□□□□ -1.86
PBRM1-202ENST00000337303 VPS13CQ709C8 3753 aa3.41□□□□□ -1.86
PBRM1-202ENST00000337303 KRTAP12-2P59991 146 aa3.39□□□□□ -1.87
PBRM1-202ENST00000337303 PRO2289Q9P1D8 64 aa3.38□□□□□ -1.87
PBRM1-202ENST00000337303 KRTAP10-10P60014 251 aa3.38□□□□□ -1.87
PBRM1-202ENST00000337303 KRTAP12-1P59990 96 aa3.36□□□□□ -1.87
PBRM1-202ENST00000337303 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
PBRM1-202ENST00000337303 AKAP9Q99996 3911 aa3.36□□□□□ -1.87
PBRM1-202ENST00000337303 CSMD2Q7Z408 3487 aa3.34□□□□□ -1.88
PBRM1-202ENST00000337303 KRTAP3-1Q9BYR8 98 aa3.32□□□□□ -1.88
PBRM1-202ENST00000337303 CUBNO60494 3623 aa3.31□□□□□ -1.88
PBRM1-202ENST00000337303 SVEP1Q4LDE5 3571 aa3.31□□□□□ -1.88
PBRM1-202ENST00000337303 ANK3Q12955 4377 aaKnown RBP3.31□□□□□ -1.88
PBRM1-202ENST00000337303 FBN1P35555 2871 aaKnown RBP3.3□□□□□ -1.88
PBRM1-202ENST00000337303 CSMD3Q7Z407 3707 aa3.28□□□□□ -1.88
PBRM1-202ENST00000337303 FBN3Q75N90 2809 aa3.26□□□□□ -1.89
PBRM1-202ENST00000337303 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
PBRM1-202ENST00000337303 MEGF8Q7Z7M0 2845 aa3.22□□□□□ -1.89
PBRM1-202ENST00000337303 KRTAP15-1Q3LI76 137 aa3.19□□□□□ -1.9
PBRM1-202ENST00000337303 COL7A1Q02388 2944 aa3.18□□□□□ -1.9
PBRM1-202ENST00000337303 LCE2AQ5TA79 106 aaPredicted RBP3.18□□□□□ -1.9
PBRM1-202ENST00000337303 LCE2BO14633 110 aa3.17□□□□□ -1.9
PBRM1-202ENST00000337303 INE1O15225 51 aa3.16□□□□□ -1.9
PBRM1-202ENST00000337303 LCE2CQ5TA81 110 aa3.14□□□□□ -1.91
PBRM1-202ENST00000337303 OTOGQ6ZRI0 2925 aa3.14□□□□□ -1.91
PBRM1-202ENST00000337303 HUWE1Q7Z6Z7 4374 aaKnown RBP3.06□□□□□ -1.92
PBRM1-202ENST00000337303 ANK2Q01484 3957 aa3.04□□□□□ -1.92
PBRM1-202ENST00000337303 CMYA5Q8N3K9 4069 aa3.03□□□□□ -1.92
PBRM1-202ENST00000337303 KRTAP23-1A1A580 65 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 209.9 ms