RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 J3QL48 77 aa7.23□□□□□ -1.25
HDAC6-201ENST00000334136 SPRR1AP35321 89 aa7.21□□□□□ -1.26
HDAC6-201ENST00000334136 UQCR11O14957 56 aa7.19□□□□□ -1.26
HDAC6-201ENST00000334136 CDC42SE1Q9NRR8 79 aa7.19□□□□□ -1.26
HDAC6-201ENST00000334136 Q5VV11 94 aa7.19□□□□□ -1.26
HDAC6-201ENST00000334136 IGLV7-46A0A075B6I9 117 aa7.17□□□□□ -1.26
HDAC6-201ENST00000334136 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
HDAC6-201ENST00000334136 Q5VSD8 79 aa7.16□□□□□ -1.26
HDAC6-201ENST00000334136 SSBP3-AS1Q7Z2R9 100 aa7.16□□□□□ -1.26
HDAC6-201ENST00000334136 Q96NJ1 140 aa7.16□□□□□ -1.26
HDAC6-201ENST00000334136 RBM12B-AS1Q9P1G2 102 aa7.16□□□□□ -1.26
HDAC6-201ENST00000334136 MMP24-AS1A0A0U1RRL7 71 aa7.14□□□□□ -1.27
HDAC6-201ENST00000334136 FLG2Q5D862 2391 aaPredicted RBP7.14□□□□□ -1.27
HDAC6-201ENST00000334136 LCA10Q71F78 164 aa7.13□□□□□ -1.27
HDAC6-201ENST00000334136 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
HDAC6-201ENST00000334136 Q75L30 129 aa7.12□□□□□ -1.27
HDAC6-201ENST00000334136 LINC00472Q9H8W2 130 aa7.11□□□□□ -1.27
HDAC6-201ENST00000334136 PRAC1Q96KF2 57 aa7.09□□□□□ -1.27
HDAC6-201ENST00000334136 SPINK7P58062 85 aa7.09□□□□□ -1.27
HDAC6-201ENST00000334136 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-201ENST00000334136 COL7A1Q02388 2944 aa7.08□□□□□ -1.28
HDAC6-201ENST00000334136 DNHD1Q96M86 4753 aa7.08□□□□□ -1.28
HDAC6-201ENST00000334136 HRES1P13985 223 aa7.08□□□□□ -1.28
HDAC6-201ENST00000334136 KRTAP7-1Q8IUC3 87 aa7.07□□□□□ -1.28
HDAC6-201ENST00000334136 ZCCHC13Q8WW36 166 aaKnown RBP7.07□□□□□ -1.28
HDAC6-201ENST00000334136 Q8N1X5 172 aa7.06□□□□□ -1.28
HDAC6-201ENST00000334136 A8MU10 97 aa7.06□□□□□ -1.28
HDAC6-201ENST00000334136 LINC01558Q9Y6Z2 57 aa7.06□□□□□ -1.28
HDAC6-201ENST00000334136 KRTAP11-1Q8IUC1 163 aa7.05□□□□□ -1.28
HDAC6-201ENST00000334136 HUWE1Q7Z6Z7 4374 aaKnown RBP7.04□□□□□ -1.28
HDAC6-201ENST00000334136 Q6ZSA8 131 aa7.03□□□□□ -1.28
HDAC6-201ENST00000334136 KRTAP29-1A8MX34 341 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-201ENST00000334136 DNAH9Q9NYC9 4486 aa7□□□□□ -1.29
HDAC6-201ENST00000334136 C9orf92A6NGG3 77 aa6.99□□□□□ -1.29
HDAC6-201ENST00000334136 SPRR1BP22528 89 aa6.99□□□□□ -1.29
HDAC6-201ENST00000334136 ANK2Q01484 3957 aa6.98□□□□□ -1.29
HDAC6-201ENST00000334136 A0A1B0GVY2 172 aa6.97□□□□□ -1.29
HDAC6-201ENST00000334136 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
HDAC6-201ENST00000334136 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
HDAC6-201ENST00000334136 A0A087X002 238 aa6.92□□□□□ -1.3
HDAC6-201ENST00000334136 NOTCH2NLQ7Z3S9 236 aa6.92□□□□□ -1.3
HDAC6-201ENST00000334136 Q5W150 140 aa6.91□□□□□ -1.3
HDAC6-201ENST00000334136 LINC00483Q53H64 154 aa6.9□□□□□ -1.3
HDAC6-201ENST00000334136 KRTAP13-1Q8IUC0 172 aa6.89□□□□□ -1.31
HDAC6-201ENST00000334136 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
HDAC6-201ENST00000334136 A0A0D9SG42 100 aa6.87□□□□□ -1.31
HDAC6-201ENST00000334136 PRKDCP78527 4128 aaKnown RBP6.86□□□□□ -1.31
HDAC6-201ENST00000334136 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
HDAC6-201ENST00000334136 A0A1B0GU33 70 aa6.81□□□□□ -1.32
HDAC6-201ENST00000334136 SRRM2Q9UQ35 2752 aaKnown RBP6.81□□□□□ -1.32
HDAC6-201ENST00000334136 H3BS24 57 aa6.81□□□□□ -1.32
HDAC6-201ENST00000334136 A6NN06 94 aa6.79□□□□□ -1.32
HDAC6-201ENST00000334136 KRTAP13-2Q52LG2 175 aa6.79□□□□□ -1.32
HDAC6-201ENST00000334136 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
HDAC6-201ENST00000334136 ADM2Q7Z4H4 148 aa6.78□□□□□ -1.32
HDAC6-201ENST00000334136 CMYA5Q8N3K9 4069 aa6.73□□□□□ -1.33
HDAC6-201ENST00000334136 PLECQ15149 4684 aaKnown RBP6.73□□□□□ -1.33
HDAC6-201ENST00000334136 KRTAP1-4P0C5Y4 121 aa6.72□□□□□ -1.33
HDAC6-201ENST00000334136 DNAH3Q8TD57 4116 aa6.71□□□□□ -1.33
HDAC6-201ENST00000334136 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
HDAC6-201ENST00000334136 SPATA8Q6RVD6 105 aa6.66□□□□□ -1.34
HDAC6-201ENST00000334136 RPS29P62273 56 aaKnown RBP6.66□□□□□ -1.34
HDAC6-201ENST00000334136 STARD9Q9P2P6 4700 aa6.66□□□□□ -1.34
HDAC6-201ENST00000334136 ALMS1Q8TCU4 4167 aa6.65□□□□□ -1.34
HDAC6-201ENST00000334136 VPS13DQ5THJ4 4388 aa6.6□□□□□ -1.35
HDAC6-201ENST00000334136 ASB16-AS1Q495Z4 193 aa6.6□□□□□ -1.35
HDAC6-201ENST00000334136 COX6B2Q6YFQ2 88 aa6.6□□□□□ -1.35
HDAC6-201ENST00000334136 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
HDAC6-201ENST00000334136 KRTAP10-8P60410 259 aa6.55□□□□□ -1.36
HDAC6-201ENST00000334136 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
HDAC6-201ENST00000334136 DNAH1Q9P2D7 4330 aa6.53□□□□□ -1.36
HDAC6-201ENST00000334136 LYSTQ99698 3801 aa6.52□□□□□ -1.37
HDAC6-201ENST00000334136 RPL37P61927 97 aaKnown RBP6.5□□□□□ -1.37
HDAC6-201ENST00000334136 ROMO1P60602 79 aa6.47□□□□□ -1.37
HDAC6-201ENST00000334136 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
HDAC6-201ENST00000334136 KRTAP25-1Q3LHN0 102 aa6.44□□□□□ -1.38
HDAC6-201ENST00000334136 DNAH5Q8TE73 4624 aa6.44□□□□□ -1.38
HDAC6-201ENST00000334136 S4R3F8 94 aa6.43□□□□□ -1.38
HDAC6-201ENST00000334136 DNAH11Q96DT5 4516 aa6.43□□□□□ -1.38
HDAC6-201ENST00000334136 KRTAP10-4P60372 401 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-201ENST00000334136 KMT2AQ03164 3969 aa6.42□□□□□ -1.38
HDAC6-201ENST00000334136 DNAH10Q8IVF4 4471 aa6.42□□□□□ -1.38
HDAC6-201ENST00000334136 DYNC2H1Q8NCM8 4307 aaKnown RBP6.38□□□□□ -1.39
HDAC6-201ENST00000334136 DNAH17Q9UFH2 4485 aa6.38□□□□□ -1.39
HDAC6-201ENST00000334136 DYNC1H1Q14204 4646 aaKnown RBP6.37□□□□□ -1.39
HDAC6-201ENST00000334136 DNAH7Q8WXX0 4024 aa6.37□□□□□ -1.39
HDAC6-201ENST00000334136 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
HDAC6-201ENST00000334136 SACSQ9NZJ4 4579 aa6.36□□□□□ -1.39
HDAC6-201ENST00000334136 LUZP6Q538Z0 58 aa6.35□□□□□ -1.39
HDAC6-201ENST00000334136 MT1HL1P0DM35 61 aa6.34□□□□□ -1.39
HDAC6-201ENST00000334136 XP32Q5T750 250 aa6.33□□□□□ -1.4
HDAC6-201ENST00000334136 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
HDAC6-201ENST00000334136 M0R2T5 61 aa6.32□□□□□ -1.4
HDAC6-201ENST00000334136 LRP1BQ9NZR2 4599 aa6.32□□□□□ -1.4
HDAC6-201ENST00000334136 RYR2Q92736 4967 aa6.31□□□□□ -1.4
HDAC6-201ENST00000334136 A8MUU9 505 aa6.31□□□□□ -1.4
HDAC6-201ENST00000334136 R4GN34 69 aa6.31□□□□□ -1.4
HDAC6-201ENST00000334136 KRTAP13-3Q3SY46 172 aa6.31□□□□□ -1.4
HDAC6-201ENST00000334136 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
HDAC6-201ENST00000334136 DNAH2Q9P225 4427 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms