RNA–Protein interactions for RNA: ENST00000331559.9

MEIS3-201, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 2,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-201ENST00000331559 Q1T7F1 81 aa13.7□□□□□ -0.22
MEIS3-201ENST00000331559 C8orf17Q9NRJ1 99 aa13.7□□□□□ -0.22
MEIS3-201ENST00000331559 HYDINQ4G0P3 5121 aa13.67□□□□□ -0.22
MEIS3-201ENST00000331559 A0A1B0GVX0 72 aa13.67□□□□□ -0.22
MEIS3-201ENST00000331559 BRK1Q8WUW1 75 aa13.67□□□□□ -0.22
MEIS3-201ENST00000331559 PKD1P98161 4303 aa13.66□□□□□ -0.22
MEIS3-201ENST00000331559 IGHV6-1A0A0B4J1U7 121 aa13.66□□□□□ -0.22
MEIS3-201ENST00000331559 TP53AIP1Q9HCN2 124 aa13.63□□□□□ -0.23
MEIS3-201ENST00000331559 A0A087X002 238 aa13.57□□□□□ -0.24
MEIS3-201ENST00000331559 NOTCH2NLQ7Z3S9 236 aa13.57□□□□□ -0.24
MEIS3-201ENST00000331559 NDUFS5O43920 106 aa13.57□□□□□ -0.24
MEIS3-201ENST00000331559 PSPHP1O15172 72 aa13.55□□□□□ -0.24
MEIS3-201ENST00000331559 MRPL34Q9BQ48 92 aaKnown RBP13.55□□□□□ -0.24
MEIS3-201ENST00000331559 KRTAP13-2Q52LG2 175 aa13.54□□□□□ -0.24
MEIS3-201ENST00000331559 PCOTHQ58A44 107 aa13.54□□□□□ -0.24
MEIS3-201ENST00000331559 IGLV7-46A0A075B6I9 117 aa13.54□□□□□ -0.24
MEIS3-201ENST00000331559 LRP1BQ9NZR2 4599 aa13.53□□□□□ -0.24
MEIS3-201ENST00000331559 SPINK6Q6UWN8 80 aa13.52□□□□□ -0.25
MEIS3-201ENST00000331559 KRTAP1-4P0C5Y4 121 aa13.49□□□□□ -0.25
MEIS3-201ENST00000331559 SACSQ9NZJ4 4579 aa13.49□□□□□ -0.25
MEIS3-201ENST00000331559 V9GYY9 64 aa13.46□□□□□ -0.25
MEIS3-201ENST00000331559 A8MUN3 132 aa13.45□□□□□ -0.26
MEIS3-201ENST00000331559 C8orf87E5RJ46 101 aa13.45□□□□□ -0.26
MEIS3-201ENST00000331559 COA5Q86WW8 74 aa13.45□□□□□ -0.26
MEIS3-201ENST00000331559 Q8N9P0 234 aaPredicted RBP13.43□□□□□ -0.26
MEIS3-201ENST00000331559 LIMD2Q9BT23 127 aa13.4□□□□□ -0.26
MEIS3-201ENST00000331559 PLA2G1BP04054 148 aaKnown RBP13.37□□□□□ -0.27
MEIS3-201ENST00000331559 Q5VV11 94 aa13.37□□□□□ -0.27
MEIS3-201ENST00000331559 C1orf195Q5TG92 126 aa13.36□□□□□ -0.27
MEIS3-201ENST00000331559 A0A1B0GVY2 172 aa13.36□□□□□ -0.27
MEIS3-201ENST00000331559 Q5W150 140 aa13.35□□□□□ -0.27
MEIS3-201ENST00000331559 TYMSOSQ8TAI1 123 aa13.34□□□□□ -0.27
MEIS3-201ENST00000331559 VPS13BQ7Z7G8 4022 aa13.33□□□□□ -0.27
MEIS3-201ENST00000331559 C4orf48Q5BLP8 95 aa13.33□□□□□ -0.28
MEIS3-201ENST00000331559 KRTAP13-3Q3SY46 172 aa13.31□□□□□ -0.28
MEIS3-201ENST00000331559 LINC00313P59037 77 aa13.3□□□□□ -0.28
MEIS3-201ENST00000331559 PRR15LQ9BU68 103 aa13.29□□□□□ -0.28
MEIS3-201ENST00000331559 LOC101927531A0A1B0GV80 90 aa13.28□□□□□ -0.28
MEIS3-201ENST00000331559 SPINK1P00995 79 aa13.28□□□□□ -0.28
MEIS3-201ENST00000331559 HRES1P13985 223 aa13.25□□□□□ -0.29
MEIS3-201ENST00000331559 DYNC1H1Q14204 4646 aaKnown RBP13.24□□□□□ -0.29
MEIS3-201ENST00000331559 CHKB-CPT1BH3BT56 60 aa13.22□□□□□ -0.29
MEIS3-201ENST00000331559 PKHD1P08F94 4074 aa13.22□□□□□ -0.29
MEIS3-201ENST00000331559 SMR3BP02814 79 aaPredicted RBP13.21□□□□□ -0.3
MEIS3-201ENST00000331559 RPS29P62273 56 aaKnown RBP13.19□□□□□ -0.3
MEIS3-201ENST00000331559 A8MU10 97 aa13.19□□□□□ -0.3
MEIS3-201ENST00000331559 SPAG11AQ6PDA7 123 aa13.18□□□□□ -0.3
MEIS3-201ENST00000331559 PRR26Q8N8Z3 221 aa13.17□□□□□ -0.3
MEIS3-201ENST00000331559 LINC00304Q8N9R0 145 aa13.17□□□□□ -0.3
MEIS3-201ENST00000331559 Q75L30 129 aa13.16□□□□□ -0.3
MEIS3-201ENST00000331559 FAM229AH3BQW9 127 aa13.15□□□□□ -0.3
MEIS3-201ENST00000331559 LINC01558Q9Y6Z2 57 aa13.13□□□□□ -0.31
MEIS3-201ENST00000331559 KRTAP16-1A8MUX0 517 aa13.12□□□□□ -0.31
MEIS3-201ENST00000331559 KRTAP10-4P60372 401 aaPredicted RBP13.1□□□□□ -0.31
MEIS3-201ENST00000331559 RYR2Q92736 4967 aa13.1□□□□□ -0.31
MEIS3-201ENST00000331559 RETNLBQ9BQ08 111 aa13.1□□□□□ -0.31
MEIS3-201ENST00000331559 APOBP04114 4563 aaKnown RBP13.09□□□□□ -0.31
MEIS3-201ENST00000331559 A6NED7 52 aa13.04□□□□□ -0.32
MEIS3-201ENST00000331559 LCA10Q71F78 164 aa13.03□□□□□ -0.32
MEIS3-201ENST00000331559 ACYP2P14621 99 aa13.01□□□□□ -0.33
MEIS3-201ENST00000331559 IGKV2-30P06310 120 aa13□□□□□ -0.33
MEIS3-201ENST00000331559 DMAC1Q96GE9 116 aa12.98□□□□□ -0.33
MEIS3-201ENST00000331559 FAT1Q14517 4588 aa12.94□□□□□ -0.34
MEIS3-201ENST00000331559 PMAIP1Q13794 54 aa12.9□□□□□ -0.34
MEIS3-201ENST00000331559 CDC42SE1Q9NRR8 79 aa12.9□□□□□ -0.34
MEIS3-201ENST00000331559 SPINK7P58062 85 aa12.89□□□□□ -0.35
MEIS3-201ENST00000331559 PKHD1L1Q86WI1 4243 aa12.89□□□□□ -0.35
MEIS3-201ENST00000331559 SPTSSBQ8NFR3 76 aa12.89□□□□□ -0.35
MEIS3-201ENST00000331559 KMT2CQ8NEZ4 4911 aaKnown RBP12.87□□□□□ -0.35
MEIS3-201ENST00000331559 ATP11AUNQ6ZP68 121 aa12.85□□□□□ -0.35
MEIS3-201ENST00000331559 IGKV2D-30A0A075B6S6 120 aa12.85□□□□□ -0.35
MEIS3-201ENST00000331559 C20orf166-AS1Q96NR2 134 aa12.72□□□□□ -0.37
MEIS3-201ENST00000331559 Q5VSD8 79 aa12.71□□□□□ -0.37
MEIS3-201ENST00000331559 A8MUU9 505 aa12.7□□□□□ -0.38
MEIS3-201ENST00000331559 C7orf65Q6ZTY9 151 aa12.7□□□□□ -0.38
MEIS3-201ENST00000331559 C9orf92A6NGG3 77 aa12.69□□□□□ -0.38
MEIS3-201ENST00000331559 A6NN06 94 aa12.69□□□□□ -0.38
MEIS3-201ENST00000331559 A0A1B0GU69 56 aa12.66□□□□□ -0.38
MEIS3-201ENST00000331559 KRTAP10-8P60410 259 aa12.64□□□□□ -0.39
MEIS3-201ENST00000331559 Q8N1X5 172 aa12.62□□□□□ -0.39
MEIS3-201ENST00000331559 KTN1-AS1Q86SY8 53 aa12.61□□□□□ -0.39
MEIS3-201ENST00000331559 HSPG2P98160 4391 aa12.59□□□□□ -0.39
MEIS3-201ENST00000331559 RYR3Q15413 4870 aa12.53□□□□□ -0.4
MEIS3-201ENST00000331559 FLG2Q5D862 2391 aaPredicted RBP12.53□□□□□ -0.4
MEIS3-201ENST00000331559 RYR1P21817 5038 aa12.5□□□□□ -0.41
MEIS3-201ENST00000331559 TNXBP22105 4242 aa12.5□□□□□ -0.41
MEIS3-201ENST00000331559 SEC61GP60059 68 aa12.49□□□□□ -0.41
MEIS3-201ENST00000331559 SPATA8Q6RVD6 105 aa12.46□□□□□ -0.42
MEIS3-201ENST00000331559 FAT3Q8TDW7 4589 aa12.45□□□□□ -0.42
MEIS3-201ENST00000331559 UQCR11O14957 56 aa12.41□□□□□ -0.42
MEIS3-201ENST00000331559 LRP1Q07954 4544 aaKnown RBP12.41□□□□□ -0.42
MEIS3-201ENST00000331559 MIR22HGQ0VDD5 57 aa12.4□□□□□ -0.43
MEIS3-201ENST00000331559 KRTAP17-1Q9BYP8 105 aa12.37□□□□□ -0.43
MEIS3-201ENST00000331559 KRTAP3-1Q9BYR8 98 aa12.3□□□□□ -0.44
MEIS3-201ENST00000331559 MT1HL1P0DM35 61 aa12.29□□□□□ -0.44
MEIS3-201ENST00000331559 RBM12B-AS1Q9P1G2 102 aa12.28□□□□□ -0.44
MEIS3-201ENST00000331559 RPL37P61927 97 aaKnown RBP12.26□□□□□ -0.45
MEIS3-201ENST00000331559 KIAA1109Q2LD37 5005 aa12.22□□□□□ -0.45
MEIS3-201ENST00000331559 XP32Q5T750 250 aa12.21□□□□□ -0.45
MEIS3-201ENST00000331559 COX6B2Q6YFQ2 88 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms