RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 ACYP2P14621 99 aa10.88□□□□□ -0.67
SOCS3-201ENST00000330871 HUWE1Q7Z6Z7 4374 aaKnown RBP10.86□□□□□ -0.67
SOCS3-201ENST00000330871 ALMS1Q8TCU4 4167 aa10.85□□□□□ -0.67
SOCS3-201ENST00000330871 CSAG1Q6PB30 78 aa10.84□□□□□ -0.67
SOCS3-201ENST00000330871 SPATA8Q6RVD6 105 aa10.84□□□□□ -0.67
SOCS3-201ENST00000330871 UBE2DNLQ8IWF7 75 aa10.83□□□□□ -0.68
SOCS3-201ENST00000330871 STAB2Q8WWQ8 2551 aa10.82□□□□□ -0.68
SOCS3-201ENST00000330871 MIR22HGQ0VDD5 57 aa10.81□□□□□ -0.68
SOCS3-201ENST00000330871 SPINK6Q6UWN8 80 aa10.8□□□□□ -0.68
SOCS3-201ENST00000330871 KRTAP13-1Q8IUC0 172 aa10.8□□□□□ -0.68
SOCS3-201ENST00000330871 DNAH9Q9NYC9 4486 aa10.79□□□□□ -0.68
SOCS3-201ENST00000330871 ANAPC11Q9NYG5 84 aa10.78□□□□□ -0.68
SOCS3-201ENST00000330871 PANO1I0J062 215 aa10.78□□□□□ -0.68
SOCS3-201ENST00000330871 KRTAP13-3Q3SY46 172 aa10.78□□□□□ -0.68
SOCS3-201ENST00000330871 RETNLBQ9BQ08 111 aa10.77□□□□□ -0.69
SOCS3-201ENST00000330871 APLNQ9ULZ1 77 aa10.75□□□□□ -0.69
SOCS3-201ENST00000330871 DMAC1Q96GE9 116 aa10.75□□□□□ -0.69
SOCS3-201ENST00000330871 UQCR11O14957 56 aa10.74□□□□□ -0.69
SOCS3-201ENST00000330871 MGAM2Q2M2H8 2515 aa10.7□□□□□ -0.7
SOCS3-201ENST00000330871 DNAH7Q8WXX0 4024 aa10.68□□□□□ -0.7
SOCS3-201ENST00000330871 LINC00483Q53H64 154 aa10.67□□□□□ -0.7
SOCS3-201ENST00000330871 WWC2-AS2Q96NR7 200 aa10.67□□□□□ -0.7
SOCS3-201ENST00000330871 NBDYA0A0U1RRE5 68 aa10.64□□□□□ -0.71
SOCS3-201ENST00000330871 SPACA4Q8TDM5 124 aa10.63□□□□□ -0.71
SOCS3-201ENST00000330871 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.63□□□□□ -0.71
SOCS3-201ENST00000330871 ZNF706Q9Y5V0 76 aaPredicted RBP10.63□□□□□ -0.71
SOCS3-201ENST00000330871 Q6ZRN7 208 aaPredicted RBP10.62□□□□□ -0.71
SOCS3-201ENST00000330871 FRAS1Q86XX4 4008 aa10.61□□□□□ -0.71
SOCS3-201ENST00000330871 ZNF861PO60384 105 aa10.59□□□□□ -0.71
SOCS3-201ENST00000330871 C1orf134Q5TEV5 83 aa10.54□□□□□ -0.72
SOCS3-201ENST00000330871 PSORS1C2Q9UIG4 136 aa10.54□□□□□ -0.72
SOCS3-201ENST00000330871 IGLV5-52A0A0A0MRZ9 124 aa10.52□□□□□ -0.72
SOCS3-201ENST00000330871 CIRBP-AS1Q8TBR5 109 aa10.52□□□□□ -0.72
SOCS3-201ENST00000330871 DYNC2H1Q8NCM8 4307 aaKnown RBP10.52□□□□□ -0.73
SOCS3-201ENST00000330871 IGKV2-30P06310 120 aa10.51□□□□□ -0.73
SOCS3-201ENST00000330871 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
SOCS3-201ENST00000330871 FAM229AH3BQW9 127 aa10.49□□□□□ -0.73
SOCS3-201ENST00000330871 A0A087WTM6 91 aa10.48□□□□□ -0.73
SOCS3-201ENST00000330871 PLECQ15149 4684 aaKnown RBP10.48□□□□□ -0.73
SOCS3-201ENST00000330871 NUPR2A6NF83 97 aa10.46□□□□□ -0.73
SOCS3-201ENST00000330871 SPINK1P00995 79 aa10.46□□□□□ -0.73
SOCS3-201ENST00000330871 IGKV2D-30A0A075B6S6 120 aa10.45□□□□□ -0.74
SOCS3-201ENST00000330871 IGLV7-43P04211 117 aa10.45□□□□□ -0.74
SOCS3-201ENST00000330871 MEGF8Q7Z7M0 2845 aa10.42□□□□□ -0.74
SOCS3-201ENST00000330871 ROMO1P60602 79 aa10.37□□□□□ -0.75
SOCS3-201ENST00000330871 KRTAP25-1Q3LHN0 102 aa10.36□□□□□ -0.75
SOCS3-201ENST00000330871 FLG2Q5D862 2391 aaPredicted RBP10.35□□□□□ -0.75
SOCS3-201ENST00000330871 TGP01266 2768 aa10.35□□□□□ -0.75
SOCS3-201ENST00000330871 A8MUU9 505 aa10.32□□□□□ -0.76
SOCS3-201ENST00000330871 SSBP3-AS1Q7Z2R9 100 aa10.31□□□□□ -0.76
SOCS3-201ENST00000330871 HECTD4Q9Y4D8 3996 aa10.31□□□□□ -0.76
SOCS3-201ENST00000330871 LINC00304Q8N9R0 145 aa10.31□□□□□ -0.76
SOCS3-201ENST00000330871 H0YAA0 97 aa10.3□□□□□ -0.76
SOCS3-201ENST00000330871 VPS13DQ5THJ4 4388 aa10.3□□□□□ -0.76
SOCS3-201ENST00000330871 DNAH17Q9UFH2 4485 aa10.3□□□□□ -0.76
SOCS3-201ENST00000330871 Q8N1X5 172 aa10.29□□□□□ -0.76
SOCS3-201ENST00000330871 CRIPTQ9P021 101 aa10.29□□□□□ -0.76
SOCS3-201ENST00000330871 Q6ZSA8 131 aa10.28□□□□□ -0.76
SOCS3-201ENST00000330871 FBN3Q75N90 2809 aa10.27□□□□□ -0.77
SOCS3-201ENST00000330871 KRTAP16-1A8MUX0 517 aa10.26□□□□□ -0.77
SOCS3-201ENST00000330871 DNHD1Q96M86 4753 aa10.24□□□□□ -0.77
SOCS3-201ENST00000330871 STARD9Q9P2P6 4700 aa10.23□□□□□ -0.77
SOCS3-201ENST00000330871 LY6G6CO95867 125 aa10.22□□□□□ -0.77
SOCS3-201ENST00000330871 KMT2AQ03164 3969 aa10.19□□□□□ -0.78
SOCS3-201ENST00000330871 TYMSOSQ8TAI1 123 aa10.19□□□□□ -0.78
SOCS3-201ENST00000330871 DNAH2Q9P225 4427 aa10.17□□□□□ -0.78
SOCS3-201ENST00000330871 P0C880 135 aa10.15□□□□□ -0.78
SOCS3-201ENST00000330871 PRKDCP78527 4128 aaKnown RBP10.12□□□□□ -0.79
SOCS3-201ENST00000330871 A0A1B0GU33 70 aa10.1□□□□□ -0.79
SOCS3-201ENST00000330871 KRTAP13-2Q52LG2 175 aa10.09□□□□□ -0.79
SOCS3-201ENST00000330871 DNAH6Q9C0G6 4158 aa10.07□□□□□ -0.8
SOCS3-201ENST00000330871 DNAH11Q96DT5 4516 aa10.03□□□□□ -0.8
SOCS3-201ENST00000330871 H1FX-AS1Q4G0G2 97 aa10.01□□□□□ -0.81
SOCS3-201ENST00000330871 KRTAP10-2P60368 255 aa9.99□□□□□ -0.81
SOCS3-201ENST00000330871 DNAH5Q8TE73 4624 aa9.94□□□□□ -0.82
SOCS3-201ENST00000330871 KRTAP1-4P0C5Y4 121 aa9.93□□□□□ -0.82
SOCS3-201ENST00000330871 KRTAP21-3Q3LHN1 58 aa9.91□□□□□ -0.82
SOCS3-201ENST00000330871 K7ERS5 55 aa9.9□□□□□ -0.82
SOCS3-201ENST00000330871 SPINT4Q6UDR6 99 aa9.87□□□□□ -0.83
SOCS3-201ENST00000330871 KRTAP3-1Q9BYR8 98 aa9.87□□□□□ -0.83
SOCS3-201ENST00000330871 LRP1BQ9NZR2 4599 aa9.87□□□□□ -0.83
SOCS3-201ENST00000330871 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
SOCS3-201ENST00000330871 COX6B2Q6YFQ2 88 aa9.84□□□□□ -0.84
SOCS3-201ENST00000330871 DMBT1Q9UGM3 2413 aaPredicted RBP9.79□□□□□ -0.84
SOCS3-201ENST00000330871 TPRXLQ17RH7 258 aa9.77□□□□□ -0.84
SOCS3-201ENST00000330871 NDUFAF8A1L188 74 aa9.76□□□□□ -0.85
SOCS3-201ENST00000330871 FAT2Q9NYQ8 4349 aa9.74□□□□□ -0.85
SOCS3-201ENST00000330871 C10orf95Q9H7T3 257 aa9.73□□□□□ -0.85
SOCS3-201ENST00000330871 VPS13BQ7Z7G8 4022 aa9.73□□□□□ -0.85
SOCS3-201ENST00000330871 C9orf92A6NGG3 77 aa9.71□□□□□ -0.85
SOCS3-201ENST00000330871 PKD1P98161 4303 aa9.7□□□□□ -0.86
SOCS3-201ENST00000330871 A0A0D9SG42 100 aa9.69□□□□□ -0.86
SOCS3-201ENST00000330871 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
SOCS3-201ENST00000330871 RPL37P61927 97 aaKnown RBP9.65□□□□□ -0.86
SOCS3-201ENST00000330871 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
SOCS3-201ENST00000330871 KRTAP15-1Q3LI76 137 aa9.62□□□□□ -0.87
SOCS3-201ENST00000330871 KRTAP13-4Q3LI77 160 aa9.62□□□□□ -0.87
SOCS3-201ENST00000330871 HYDINQ4G0P3 5121 aa9.58□□□□□ -0.88
SOCS3-201ENST00000330871 KRTAP10-6P60371 365 aaPredicted RBP9.53□□□□□ -0.88
SOCS3-201ENST00000330871 SACSQ9NZJ4 4579 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms