RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 NSD1Q96L73 2696 aaPredicted RBP7.32□□□□□ -1.24
TRAK1-201ENST00000327628 CFAP47Q6ZTR5 3102 aa7.3□□□□□ -1.24
TRAK1-201ENST00000327628 COL12A1Q99715 3063 aa7.3□□□□□ -1.24
TRAK1-201ENST00000327628 STAB2Q8WWQ8 2551 aa7.29□□□□□ -1.24
TRAK1-201ENST00000327628 BAHCC1Q9P281 2608 aa7.28□□□□□ -1.24
TRAK1-201ENST00000327628 LRBAP50851 2863 aa7.28□□□□□ -1.24
TRAK1-201ENST00000327628 A8MU10 97 aa7.27□□□□□ -1.25
TRAK1-201ENST00000327628 FLG2Q5D862 2391 aaPredicted RBP7.24□□□□□ -1.25
TRAK1-201ENST00000327628 COL6A3P12111 3177 aa7.22□□□□□ -1.25
TRAK1-201ENST00000327628 ZZEF1O43149 2961 aa7.22□□□□□ -1.25
TRAK1-201ENST00000327628 SPEGQ15772 3267 aa7.22□□□□□ -1.25
TRAK1-201ENST00000327628 TPRXLQ17RH7 258 aa7.21□□□□□ -1.26
TRAK1-201ENST00000327628 USP34Q70CQ2 3546 aa7.18□□□□□ -1.26
TRAK1-201ENST00000327628 UTP20O75691 2785 aaKnown RBP7.17□□□□□ -1.26
TRAK1-201ENST00000327628 DMBT1Q9UGM3 2413 aaPredicted RBP7.15□□□□□ -1.26
TRAK1-201ENST00000327628 XP32Q5T750 250 aa7.15□□□□□ -1.27
TRAK1-201ENST00000327628 CELSR2Q9HCU4 2923 aa7.15□□□□□ -1.27
TRAK1-201ENST00000327628 ZANQ9Y493 2812 aa7.14□□□□□ -1.27
TRAK1-201ENST00000327628 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
TRAK1-201ENST00000327628 APCP25054 2843 aa7.12□□□□□ -1.27
TRAK1-201ENST00000327628 REV3LO60673 3130 aa7.12□□□□□ -1.27
TRAK1-201ENST00000327628 ITPR2Q14571 2701 aa7.11□□□□□ -1.27
TRAK1-201ENST00000327628 NIPBLQ6KC79 2804 aaeCLIP7.1□□□□□ -1.27
TRAK1-201ENST00000327628 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
TRAK1-201ENST00000327628 HIVEP1P15822 2718 aa7.1□□□□□ -1.27
TRAK1-201ENST00000327628 EYSQ5T1H1 3165 aa7.09□□□□□ -1.27
TRAK1-201ENST00000327628 KMT2BQ9UMN6 2715 aaPredicted RBP7.08□□□□□ -1.28
TRAK1-201ENST00000327628 C10orf95Q9H7T3 257 aa7.06□□□□□ -1.28
TRAK1-201ENST00000327628 NDUFAF8A1L188 74 aa7.06□□□□□ -1.28
TRAK1-201ENST00000327628 DCHS2Q6V1P9 2916 aa7.01□□□□□ -1.29
TRAK1-201ENST00000327628 NF1P21359 2839 aa7.01□□□□□ -1.29
TRAK1-201ENST00000327628 LOC400499M0QZD8 3231 aa7□□□□□ -1.29
TRAK1-201ENST00000327628 KRTAP10-8P60410 259 aa6.99□□□□□ -1.29
TRAK1-201ENST00000327628 DMXL1Q9Y485 3027 aa6.98□□□□□ -1.29
TRAK1-201ENST00000327628 FBN2P35556 2912 aa6.96□□□□□ -1.29
TRAK1-201ENST00000327628 TNRC18O15417 2968 aaPredicted RBP6.95□□□□□ -1.3
TRAK1-201ENST00000327628 P0C880 135 aa6.94□□□□□ -1.3
TRAK1-201ENST00000327628 SPTBN5Q9NRC6 3674 aaKnown RBP6.94□□□□□ -1.3
TRAK1-201ENST00000327628 KRTAP13-3Q3SY46 172 aa6.94□□□□□ -1.3
TRAK1-201ENST00000327628 HRNRQ86YZ3 2850 aaPredicted RBP6.91□□□□□ -1.3
TRAK1-201ENST00000327628 H0YAA0 97 aa6.89□□□□□ -1.31
TRAK1-201ENST00000327628 MYO15AQ9UKN7 3530 aa6.85□□□□□ -1.31
TRAK1-201ENST00000327628 KRTAP10-10P60014 251 aa6.85□□□□□ -1.31
TRAK1-201ENST00000327628 CRYBG3Q68DQ2 2970 aa6.83□□□□□ -1.32
TRAK1-201ENST00000327628 TENM4Q6N022 2769 aa6.8□□□□□ -1.32
TRAK1-201ENST00000327628 MXRA5Q9NR99 2828 aa6.77□□□□□ -1.33
TRAK1-201ENST00000327628 A0A1B0GVY2 172 aa6.75□□□□□ -1.33
TRAK1-201ENST00000327628 WDFY3Q8IZQ1 3526 aa6.75□□□□□ -1.33
TRAK1-201ENST00000327628 TENM3Q9P273 2699 aa6.68□□□□□ -1.34
TRAK1-201ENST00000327628 DCHS1Q96JQ0 3298 aa6.68□□□□□ -1.34
TRAK1-201ENST00000327628 KRTAP13-4Q3LI77 160 aa6.63□□□□□ -1.35
TRAK1-201ENST00000327628 DMDP11532 3685 aa6.62□□□□□ -1.35
TRAK1-201ENST00000327628 CELSR1Q9NYQ6 3014 aa6.6□□□□□ -1.35
TRAK1-201ENST00000327628 RELNP78509 3460 aa6.58□□□□□ -1.36
TRAK1-201ENST00000327628 TENM1Q9UKZ4 2725 aa6.54□□□□□ -1.36
TRAK1-201ENST00000327628 PDZD2O15018 2839 aa6.53□□□□□ -1.36
TRAK1-201ENST00000327628 SPENQ96T58 3664 aaKnown RBP6.48□□□□□ -1.37
TRAK1-201ENST00000327628 MUC3AQ02505 3323 aa6.48□□□□□ -1.37
TRAK1-201ENST00000327628 TGP01266 2768 aa6.46□□□□□ -1.37
TRAK1-201ENST00000327628 ASPMQ8IZT6 3477 aa6.46□□□□□ -1.38
TRAK1-201ENST00000327628 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
TRAK1-201ENST00000327628 ZFHX4Q86UP3 3567 aa6.43□□□□□ -1.38
TRAK1-201ENST00000327628 PKD1L1Q8TDX9 2849 aa6.43□□□□□ -1.38
TRAK1-201ENST00000327628 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
TRAK1-201ENST00000327628 LAMA5O15230 3695 aa6.39□□□□□ -1.39
TRAK1-201ENST00000327628 VWFP04275 2813 aa6.38□□□□□ -1.39
TRAK1-201ENST00000327628 FBN1P35555 2871 aaKnown RBP6.37□□□□□ -1.39
TRAK1-201ENST00000327628 CSMD1Q96PZ7 3565 aa6.36□□□□□ -1.39
TRAK1-201ENST00000327628 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
TRAK1-201ENST00000327628 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.4
TRAK1-201ENST00000327628 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
TRAK1-201ENST00000327628 SMG1Q96Q15 3661 aaKnown RBP6.25□□□□□ -1.41
TRAK1-201ENST00000327628 CUBNO60494 3623 aa6.22□□□□□ -1.41
TRAK1-201ENST00000327628 INE1O15225 51 aa6.22□□□□□ -1.41
TRAK1-201ENST00000327628 OTOGQ6ZRI0 2925 aa6.19□□□□□ -1.42
TRAK1-201ENST00000327628 BSNQ9UPA5 3926 aa6.18□□□□□ -1.42
TRAK1-201ENST00000327628 KRTAP23-1A1A580 65 aa6.18□□□□□ -1.42
TRAK1-201ENST00000327628 SRRM2Q9UQ35 2752 aaKnown RBP6.17□□□□□ -1.42
TRAK1-201ENST00000327628 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
TRAK1-201ENST00000327628 SVEP1Q4LDE5 3571 aa6.15□□□□□ -1.43
TRAK1-201ENST00000327628 FBN3Q75N90 2809 aa6.11□□□□□ -1.43
TRAK1-201ENST00000327628 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
TRAK1-201ENST00000327628 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
TRAK1-201ENST00000327628 ZFHX3Q15911 3703 aa6.01□□□□□ -1.45
TRAK1-201ENST00000327628 MEGF8Q7Z7M0 2845 aa5.99□□□□□ -1.45
TRAK1-201ENST00000327628 COL7A1Q02388 2944 aa5.96□□□□□ -1.46
TRAK1-201ENST00000327628 CSMD2Q7Z408 3487 aa5.94□□□□□ -1.46
TRAK1-201ENST00000327628 NBPF19A0A087WUL8 3843 aa5.94□□□□□ -1.46
TRAK1-201ENST00000327628 KRTAP3-2Q9BYR7 98 aa5.92□□□□□ -1.46
TRAK1-201ENST00000327628 KRTAP3-3Q9BYR6 98 aa5.88□□□□□ -1.47
TRAK1-201ENST00000327628 VPS13CQ709C8 3753 aa5.88□□□□□ -1.47
TRAK1-201ENST00000327628 KRTAP10-4P60372 401 aaPredicted RBP5.85□□□□□ -1.47
TRAK1-201ENST00000327628 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
TRAK1-201ENST00000327628 TRRAPQ9Y4A5 3859 aa5.8□□□□□ -1.48
TRAK1-201ENST00000327628 HUWE1Q7Z6Z7 4374 aaKnown RBP5.7□□□□□ -1.5
TRAK1-201ENST00000327628 ANK3Q12955 4377 aaKnown RBP5.67□□□□□ -1.5
TRAK1-201ENST00000327628 ALMS1Q8TCU4 4167 aa5.64□□□□□ -1.51
TRAK1-201ENST00000327628 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
TRAK1-201ENST00000327628 AKAP9Q99996 3911 aa5.62□□□□□ -1.51
TRAK1-201ENST00000327628 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms