RNA–Protein interactions for RNA: ENST00000327283.7

PTPN2-202, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN2, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-202ENST00000327283 DNAH5Q8TE73 4624 aa13.54□□□□□ -0.24
PTPN2-202ENST00000327283 IGLV7-46A0A075B6I9 117 aa13.53□□□□□ -0.24
PTPN2-202ENST00000327283 Q1T7F1 81 aa13.53□□□□□ -0.24
PTPN2-202ENST00000327283 NDUFS5O43920 106 aa13.52□□□□□ -0.25
PTPN2-202ENST00000327283 PRR4Q16378 134 aa13.49□□□□□ -0.25
PTPN2-202ENST00000327283 KRTAP13-2Q52LG2 175 aa13.49□□□□□ -0.25
PTPN2-202ENST00000327283 SPINK6Q6UWN8 80 aa13.48□□□□□ -0.25
PTPN2-202ENST00000327283 A0A087X002 238 aa13.47□□□□□ -0.25
PTPN2-202ENST00000327283 NOTCH2NLQ7Z3S9 236 aa13.47□□□□□ -0.25
PTPN2-202ENST00000327283 V9GYY9 64 aa13.47□□□□□ -0.25
PTPN2-202ENST00000327283 MPLKIPQ8TAP9 179 aa13.46□□□□□ -0.25
PTPN2-202ENST00000327283 LIMD2Q9BT23 127 aa13.45□□□□□ -0.26
PTPN2-202ENST00000327283 LOC101927531A0A1B0GV80 90 aa13.44□□□□□ -0.26
PTPN2-202ENST00000327283 KRTAP1-4P0C5Y4 121 aa13.44□□□□□ -0.26
PTPN2-202ENST00000327283 PKD1P98161 4303 aa13.42□□□□□ -0.26
PTPN2-202ENST00000327283 C1orf195Q5TG92 126 aa13.41□□□□□ -0.26
PTPN2-202ENST00000327283 KRTAP13-3Q3SY46 172 aa13.39□□□□□ -0.27
PTPN2-202ENST00000327283 LINC00336Q6ZUF6 198 aa13.39□□□□□ -0.27
PTPN2-202ENST00000327283 FAT2Q9NYQ8 4349 aa13.38□□□□□ -0.27
PTPN2-202ENST00000327283 LINC00313P59037 77 aa13.37□□□□□ -0.27
PTPN2-202ENST00000327283 PRO0628Q9UI54 55 aa13.35□□□□□ -0.27
PTPN2-202ENST00000327283 PCOTHQ58A44 107 aa13.34□□□□□ -0.27
PTPN2-202ENST00000327283 Q8N9P0 234 aaPredicted RBP13.34□□□□□ -0.27
PTPN2-202ENST00000327283 FAM229AH3BQW9 127 aa13.3□□□□□ -0.28
PTPN2-202ENST00000327283 COA5Q86WW8 74 aa13.3□□□□□ -0.28
PTPN2-202ENST00000327283 SPINK1P00995 79 aa13.29□□□□□ -0.28
PTPN2-202ENST00000327283 C4orf48Q5BLP8 95 aa13.29□□□□□ -0.28
PTPN2-202ENST00000327283 PLA2G1BP04054 148 aaKnown RBP13.27□□□□□ -0.28
PTPN2-202ENST00000327283 RPS29P62273 56 aaKnown RBP13.27□□□□□ -0.28
PTPN2-202ENST00000327283 Q5W150 140 aa13.27□□□□□ -0.28
PTPN2-202ENST00000327283 TYMSOSQ8TAI1 123 aa13.26□□□□□ -0.29
PTPN2-202ENST00000327283 LRP1BQ9NZR2 4599 aa13.25□□□□□ -0.29
PTPN2-202ENST00000327283 KRTAP16-1A8MUX0 517 aa13.22□□□□□ -0.29
PTPN2-202ENST00000327283 SPAG11AQ6PDA7 123 aa13.21□□□□□ -0.3
PTPN2-202ENST00000327283 HYDINQ4G0P3 5121 aa13.18□□□□□ -0.3
PTPN2-202ENST00000327283 BRK1Q8WUW1 75 aa13.17□□□□□ -0.3
PTPN2-202ENST00000327283 A0A1B0GVY2 172 aa13.13□□□□□ -0.31
PTPN2-202ENST00000327283 IGKV2-30P06310 120 aa13.13□□□□□ -0.31
PTPN2-202ENST00000327283 HRES1P13985 223 aa13.13□□□□□ -0.31
PTPN2-202ENST00000327283 PSPHP1O15172 72 aa13.11□□□□□ -0.31
PTPN2-202ENST00000327283 LINC00304Q8N9R0 145 aa13.11□□□□□ -0.31
PTPN2-202ENST00000327283 VPS13BQ7Z7G8 4022 aa13.11□□□□□ -0.31
PTPN2-202ENST00000327283 A8MUN3 132 aa13.09□□□□□ -0.31
PTPN2-202ENST00000327283 ACYP2P14621 99 aa13.08□□□□□ -0.32
PTPN2-202ENST00000327283 Q5VV11 94 aa13.08□□□□□ -0.32
PTPN2-202ENST00000327283 SACSQ9NZJ4 4579 aa13.06□□□□□ -0.32
PTPN2-202ENST00000327283 DMAC1Q96GE9 116 aa13.05□□□□□ -0.32
PTPN2-202ENST00000327283 LINC01558Q9Y6Z2 57 aa13.05□□□□□ -0.32
PTPN2-202ENST00000327283 PRR26Q8N8Z3 221 aa13.02□□□□□ -0.32
PTPN2-202ENST00000327283 Q75L30 129 aa13.02□□□□□ -0.33
PTPN2-202ENST00000327283 PRR15LQ9BU68 103 aa13.01□□□□□ -0.33
PTPN2-202ENST00000327283 KRTAP10-4P60372 401 aaPredicted RBP12.96□□□□□ -0.33
PTPN2-202ENST00000327283 CHKB-CPT1BH3BT56 60 aa12.92□□□□□ -0.34
PTPN2-202ENST00000327283 SMR3BP02814 79 aaPredicted RBP12.91□□□□□ -0.34
PTPN2-202ENST00000327283 DYNC1H1Q14204 4646 aaKnown RBP12.9□□□□□ -0.34
PTPN2-202ENST00000327283 RETNLBQ9BQ08 111 aa12.9□□□□□ -0.34
PTPN2-202ENST00000327283 PKHD1P08F94 4074 aa12.88□□□□□ -0.35
PTPN2-202ENST00000327283 IGKV2D-30A0A075B6S6 120 aa12.82□□□□□ -0.36
PTPN2-202ENST00000327283 C7orf65Q6ZTY9 151 aa12.82□□□□□ -0.36
PTPN2-202ENST00000327283 C20orf166-AS1Q96NR2 134 aa12.79□□□□□ -0.36
PTPN2-202ENST00000327283 PKHD1L1Q86WI1 4243 aa12.78□□□□□ -0.36
PTPN2-202ENST00000327283 A8MUU9 505 aa12.77□□□□□ -0.36
PTPN2-202ENST00000327283 APOBP04114 4563 aaKnown RBP12.77□□□□□ -0.37
PTPN2-202ENST00000327283 A6NED7 52 aa12.76□□□□□ -0.37
PTPN2-202ENST00000327283 CDC42SE1Q9NRR8 79 aa12.72□□□□□ -0.37
PTPN2-202ENST00000327283 ATP11AUNQ6ZP68 121 aa12.65□□□□□ -0.38
PTPN2-202ENST00000327283 LCA10Q71F78 164 aa12.65□□□□□ -0.38
PTPN2-202ENST00000327283 RYR2Q92736 4967 aa12.64□□□□□ -0.39
PTPN2-202ENST00000327283 C9orf92A6NGG3 77 aa12.57□□□□□ -0.4
PTPN2-202ENST00000327283 A0A1B0GU69 56 aa12.57□□□□□ -0.4
PTPN2-202ENST00000327283 FAT1Q14517 4588 aa12.57□□□□□ -0.4
PTPN2-202ENST00000327283 SPINK7P58062 85 aa12.56□□□□□ -0.4
PTPN2-202ENST00000327283 A8MU10 97 aa12.54□□□□□ -0.4
PTPN2-202ENST00000327283 KRTAP10-8P60410 259 aa12.53□□□□□ -0.4
PTPN2-202ENST00000327283 SPTSSBQ8NFR3 76 aa12.51□□□□□ -0.41
PTPN2-202ENST00000327283 FLG2Q5D862 2391 aaPredicted RBP12.49□□□□□ -0.41
PTPN2-202ENST00000327283 PMAIP1Q13794 54 aa12.48□□□□□ -0.41
PTPN2-202ENST00000327283 Q5VSD8 79 aa12.45□□□□□ -0.42
PTPN2-202ENST00000327283 Q8N1X5 172 aa12.44□□□□□ -0.42
PTPN2-202ENST00000327283 SPATA8Q6RVD6 105 aa12.37□□□□□ -0.43
PTPN2-202ENST00000327283 A6NN06 94 aa12.36□□□□□ -0.43
PTPN2-202ENST00000327283 UQCR11O14957 56 aa12.36□□□□□ -0.43
PTPN2-202ENST00000327283 SEC61GP60059 68 aa12.31□□□□□ -0.44
PTPN2-202ENST00000327283 KMT2CQ8NEZ4 4911 aaKnown RBP12.3□□□□□ -0.44
PTPN2-202ENST00000327283 KRTAP3-1Q9BYR8 98 aa12.28□□□□□ -0.44
PTPN2-202ENST00000327283 COX6B2Q6YFQ2 88 aa12.28□□□□□ -0.44
PTPN2-202ENST00000327283 TNXBP22105 4242 aa12.26□□□□□ -0.45
PTPN2-202ENST00000327283 MIR22HGQ0VDD5 57 aa12.25□□□□□ -0.45
PTPN2-202ENST00000327283 KTN1-AS1Q86SY8 53 aa12.25□□□□□ -0.45
PTPN2-202ENST00000327283 HSPG2P98160 4391 aa12.25□□□□□ -0.45
PTPN2-202ENST00000327283 RPL37P61927 97 aaKnown RBP12.25□□□□□ -0.45
PTPN2-202ENST00000327283 FAT3Q8TDW7 4589 aa12.22□□□□□ -0.45
PTPN2-202ENST00000327283 XP32Q5T750 250 aa12.14□□□□□ -0.47
PTPN2-202ENST00000327283 RYR1P21817 5038 aa12.12□□□□□ -0.47
PTPN2-202ENST00000327283 MT1HL1P0DM35 61 aa12.11□□□□□ -0.47
PTPN2-202ENST00000327283 LRP1Q07954 4544 aaKnown RBP12.06□□□□□ -0.48
PTPN2-202ENST00000327283 KRTAP17-1Q9BYP8 105 aa12.02□□□□□ -0.49
PTPN2-202ENST00000327283 DMBT1Q9UGM3 2413 aaPredicted RBP12□□□□□ -0.49
PTPN2-202ENST00000327283 A0A1B0GU33 70 aa11.96□□□□□ -0.49
PTPN2-202ENST00000327283 H1FX-AS1Q4G0G2 97 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms