RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 NBDYA0A0U1RRE5 68 aa14.41□□□□□ -0.1
PACS2-201ENST00000325438 ADM2Q7Z4H4 148 aa14.4□□□□□ -0.1
PACS2-201ENST00000325438 Q5W150 140 aa14.37□□□□□ -0.11
PACS2-201ENST00000325438 Q6ZR54 194 aa14.31□□□□□ -0.12
PACS2-201ENST00000325438 Q96NJ1 140 aa14.3□□□□□ -0.12
PACS2-201ENST00000325438 RTL8CO15255 209 aa14.29□□□□□ -0.12
PACS2-201ENST00000325438 MIR22HGQ0VDD5 57 aa14.29□□□□□ -0.12
PACS2-201ENST00000325438 IGLV5-52A0A0A0MRZ9 124 aa14.28□□□□□ -0.12
PACS2-201ENST00000325438 ZNF861PO60384 105 aa14.27□□□□□ -0.12
PACS2-201ENST00000325438 FLG2Q5D862 2391 aaPredicted RBP14.27□□□□□ -0.12
PACS2-201ENST00000325438 APLNQ9ULZ1 77 aa14.27□□□□□ -0.13
PACS2-201ENST00000325438 LINC01554Q52M75 96 aa14.26□□□□□ -0.13
PACS2-201ENST00000325438 SPACA4Q8TDM5 124 aa14.26□□□□□ -0.13
PACS2-201ENST00000325438 WWC2-AS2Q96NR7 200 aa14.25□□□□□ -0.13
PACS2-201ENST00000325438 UQCR11O14957 56 aa14.24□□□□□ -0.13
PACS2-201ENST00000325438 DMBT1Q9UGM3 2413 aaPredicted RBP14.24□□□□□ -0.13
PACS2-201ENST00000325438 TGP01266 2768 aa14.2□□□□□ -0.14
PACS2-201ENST00000325438 FAM229AH3BQW9 127 aa14.17□□□□□ -0.14
PACS2-201ENST00000325438 A0A087WTM6 91 aa14.16□□□□□ -0.14
PACS2-201ENST00000325438 NUPR2A6NF83 97 aa14.11□□□□□ -0.15
PACS2-201ENST00000325438 LY6G6CO95867 125 aa14.1□□□□□ -0.15
PACS2-201ENST00000325438 Q8N1X5 172 aa14.08□□□□□ -0.15
PACS2-201ENST00000325438 KRTAP13-1Q8IUC0 172 aa14.08□□□□□ -0.16
PACS2-201ENST00000325438 CSAG1Q6PB30 78 aa14.05□□□□□ -0.16
PACS2-201ENST00000325438 IGLV7-43P04211 117 aa14.03□□□□□ -0.16
PACS2-201ENST00000325438 PLAC8Q9NZF1 115 aa13.99□□□□□ -0.17
PACS2-201ENST00000325438 LINC00483Q53H64 154 aa13.99□□□□□ -0.17
PACS2-201ENST00000325438 FBN3Q75N90 2809 aa13.99□□□□□ -0.17
PACS2-201ENST00000325438 ASB16-AS1Q495Z4 193 aa13.97□□□□□ -0.17
PACS2-201ENST00000325438 C1orf134Q5TEV5 83 aa13.97□□□□□ -0.17
PACS2-201ENST00000325438 DMAC1Q96GE9 116 aa13.97□□□□□ -0.17
PACS2-201ENST00000325438 SSBP3-AS1Q7Z2R9 100 aa13.92□□□□□ -0.18
PACS2-201ENST00000325438 DNAH10Q8IVF4 4471 aa13.92□□□□□ -0.18
PACS2-201ENST00000325438 Q6ZRN7 208 aaPredicted RBP13.85□□□□□ -0.19
PACS2-201ENST00000325438 PLA2G1BP04054 148 aaKnown RBP13.84□□□□□ -0.19
PACS2-201ENST00000325438 SPATA8Q6RVD6 105 aa13.83□□□□□ -0.2
PACS2-201ENST00000325438 CRIPTQ9P021 101 aa13.82□□□□□ -0.2
PACS2-201ENST00000325438 ANK2Q01484 3957 aa13.79□□□□□ -0.2
PACS2-201ENST00000325438 TYMSOSQ8TAI1 123 aa13.73□□□□□ -0.21
PACS2-201ENST00000325438 K7ERS5 55 aa13.71□□□□□ -0.21
PACS2-201ENST00000325438 C9orf92A6NGG3 77 aa13.7□□□□□ -0.22
PACS2-201ENST00000325438 MEGF8Q7Z7M0 2845 aa13.65□□□□□ -0.22
PACS2-201ENST00000325438 KRTAP13-3Q3SY46 172 aa13.62□□□□□ -0.23
PACS2-201ENST00000325438 LYSTQ99698 3801 aa13.57□□□□□ -0.24
PACS2-201ENST00000325438 KRTAP10-2P60368 255 aa13.56□□□□□ -0.24
PACS2-201ENST00000325438 KRTAP13-2Q52LG2 175 aa13.54□□□□□ -0.24
PACS2-201ENST00000325438 HUWE1Q7Z6Z7 4374 aaKnown RBP13.53□□□□□ -0.24
PACS2-201ENST00000325438 A0A1B0GU33 70 aa13.53□□□□□ -0.24
PACS2-201ENST00000325438 SMR3BP02814 79 aaPredicted RBP13.43□□□□□ -0.26
PACS2-201ENST00000325438 A0A0D9SG42 100 aa13.42□□□□□ -0.26
PACS2-201ENST00000325438 LINC00304Q8N9R0 145 aa13.39□□□□□ -0.27
PACS2-201ENST00000325438 DNAH9Q9NYC9 4486 aa13.37□□□□□ -0.27
PACS2-201ENST00000325438 KRTAP10-1P60331 282 aa13.36□□□□□ -0.27
PACS2-201ENST00000325438 SPINT4Q6UDR6 99 aa13.35□□□□□ -0.27
PACS2-201ENST00000325438 Q6ZSA8 131 aa13.31□□□□□ -0.28
PACS2-201ENST00000325438 KRTAP16-1A8MUX0 517 aa13.29□□□□□ -0.28
PACS2-201ENST00000325438 H0YAA0 97 aa13.25□□□□□ -0.29
PACS2-201ENST00000325438 KRTAP25-1Q3LHN0 102 aa13.25□□□□□ -0.29
PACS2-201ENST00000325438 ROMO1P60602 79 aa13.25□□□□□ -0.29
PACS2-201ENST00000325438 H1FX-AS1Q4G0G2 97 aa13.21□□□□□ -0.29
PACS2-201ENST00000325438 PLECQ15149 4684 aaKnown RBP13.2□□□□□ -0.3
PACS2-201ENST00000325438 FRAS1Q86XX4 4008 aa13.14□□□□□ -0.31
PACS2-201ENST00000325438 A8MUU9 505 aa13.12□□□□□ -0.31
PACS2-201ENST00000325438 DNAH1Q9P2D7 4330 aa13.09□□□□□ -0.31
PACS2-201ENST00000325438 KRTAP1-4P0C5Y4 121 aa13.08□□□□□ -0.32
PACS2-201ENST00000325438 DNAH8Q96JB1 4490 aa13.06□□□□□ -0.32
PACS2-201ENST00000325438 DNAH7Q8WXX0 4024 aa13.05□□□□□ -0.32
PACS2-201ENST00000325438 COX6B2Q6YFQ2 88 aa12.97□□□□□ -0.33
PACS2-201ENST00000325438 CMYA5Q8N3K9 4069 aa12.95□□□□□ -0.34
PACS2-201ENST00000325438 RPL37P61927 97 aaKnown RBP12.88□□□□□ -0.35
PACS2-201ENST00000325438 DNAH11Q96DT5 4516 aa12.85□□□□□ -0.35
PACS2-201ENST00000325438 C10orf95Q9H7T3 257 aa12.83□□□□□ -0.36
PACS2-201ENST00000325438 NDUFAF8A1L188 74 aa12.82□□□□□ -0.36
PACS2-201ENST00000325438 KMT2AQ03164 3969 aa12.81□□□□□ -0.36
PACS2-201ENST00000325438 DNAH17Q9UFH2 4485 aa12.81□□□□□ -0.36
PACS2-201ENST00000325438 STARD9Q9P2P6 4700 aa12.8□□□□□ -0.36
PACS2-201ENST00000325438 KRTAP3-1Q9BYR8 98 aa12.77□□□□□ -0.36
PACS2-201ENST00000325438 ALMS1Q8TCU4 4167 aa12.76□□□□□ -0.37
PACS2-201ENST00000325438 P0C880 135 aa12.73□□□□□ -0.37
PACS2-201ENST00000325438 DNAH3Q8TD57 4116 aa12.71□□□□□ -0.37
PACS2-201ENST00000325438 C20orf166-AS1Q96NR2 134 aa12.65□□□□□ -0.38
PACS2-201ENST00000325438 LRP1BQ9NZR2 4599 aa12.62□□□□□ -0.39
PACS2-201ENST00000325438 DNAH2Q9P225 4427 aa12.59□□□□□ -0.39
PACS2-201ENST00000325438 S4R3F8 94 aa12.59□□□□□ -0.39
PACS2-201ENST00000325438 HECTD4Q9Y4D8 3996 aa12.59□□□□□ -0.39
PACS2-201ENST00000325438 VPS13DQ5THJ4 4388 aa12.57□□□□□ -0.4
PACS2-201ENST00000325438 DNAH6Q9C0G6 4158 aa12.56□□□□□ -0.4
PACS2-201ENST00000325438 PRKDCP78527 4128 aaKnown RBP12.48□□□□□ -0.41
PACS2-201ENST00000325438 RPS29P62273 56 aaKnown RBP12.46□□□□□ -0.41
PACS2-201ENST00000325438 TPRXLQ17RH7 258 aa12.45□□□□□ -0.42
PACS2-201ENST00000325438 KRTAP13-4Q3LI77 160 aa12.42□□□□□ -0.42
PACS2-201ENST00000325438 VPS13BQ7Z7G8 4022 aa12.29□□□□□ -0.44
PACS2-201ENST00000325438 A0A0A0MQY5 61 aa12.28□□□□□ -0.44
PACS2-201ENST00000325438 KRTAP10-6P60371 365 aaPredicted RBP12.26□□□□□ -0.45
PACS2-201ENST00000325438 DNAH5Q8TE73 4624 aa12.24□□□□□ -0.45
PACS2-201ENST00000325438 FAT1Q14517 4588 aa12.22□□□□□ -0.45
PACS2-201ENST00000325438 KRTAP12-2P59991 146 aa12.2□□□□□ -0.46
PACS2-201ENST00000325438 KRTAP10-8P60410 259 aa12.18□□□□□ -0.46
PACS2-201ENST00000325438 DYNC2H1Q8NCM8 4307 aaKnown RBP12.14□□□□□ -0.47
PACS2-201ENST00000325438 M0QZ58 72 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms