RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 ANK3Q12955 4377 aaKnown RBP9.84□□□□□ -0.83
LMNB2-201ENST00000325327 M0R2T5 61 aa9.82□□□□□ -0.84
LMNB2-201ENST00000325327 MMP24-AS1A0A0U1RRL7 71 aa9.81□□□□□ -0.84
LMNB2-201ENST00000325327 LINC00483Q53H64 154 aa9.8□□□□□ -0.84
LMNB2-201ENST00000325327 LINC01600Q96MT4 127 aa9.78□□□□□ -0.84
LMNB2-201ENST00000325327 COA5Q86WW8 74 aa9.78□□□□□ -0.84
LMNB2-201ENST00000325327 PRO0628Q9UI54 55 aa9.76□□□□□ -0.85
LMNB2-201ENST00000325327 Q8N9P0 234 aaPredicted RBP9.74□□□□□ -0.85
LMNB2-201ENST00000325327 KLKP1Q107X0 134 aa9.73□□□□□ -0.85
LMNB2-201ENST00000325327 OCR1Q9BZK8 76 aa9.73□□□□□ -0.85
LMNB2-201ENST00000325327 KRTAP13-2Q52LG2 175 aa9.73□□□□□ -0.85
LMNB2-201ENST00000325327 ZCCHC13Q8WW36 166 aaKnown RBP9.72□□□□□ -0.85
LMNB2-201ENST00000325327 H7BZZ5 65 aa9.72□□□□□ -0.85
LMNB2-201ENST00000325327 VPS13CQ709C8 3753 aa9.71□□□□□ -0.85
LMNB2-201ENST00000325327 LINC01554Q52M75 96 aa9.71□□□□□ -0.86
LMNB2-201ENST00000325327 SPINK7P58062 85 aa9.7□□□□□ -0.86
LMNB2-201ENST00000325327 A8MUN3 132 aa9.69□□□□□ -0.86
LMNB2-201ENST00000325327 SEC61BP60468 96 aaKnown RBP9.67□□□□□ -0.86
LMNB2-201ENST00000325327 ZNF469Q96JG9 3925 aaPredicted RBP9.66□□□□□ -0.86
LMNB2-201ENST00000325327 KRTAP13-1Q8IUC0 172 aa9.66□□□□□ -0.86
LMNB2-201ENST00000325327 HRES1P13985 223 aa9.66□□□□□ -0.86
LMNB2-201ENST00000325327 NOTCH2NLQ7Z3S9 236 aa9.65□□□□□ -0.86
LMNB2-201ENST00000325327 Q5W150 140 aa9.61□□□□□ -0.87
LMNB2-201ENST00000325327 FP248Q71RG6 208 aaPredicted RBP9.57□□□□□ -0.88
LMNB2-201ENST00000325327 OXTP01178 125 aa9.56□□□□□ -0.88
LMNB2-201ENST00000325327 CYP4F30PQ9H0H9 118 aa9.56□□□□□ -0.88
LMNB2-201ENST00000325327 MEGF8Q7Z7M0 2845 aa9.55□□□□□ -0.88
LMNB2-201ENST00000325327 A0A0D9SG42 100 aa9.53□□□□□ -0.88
LMNB2-201ENST00000325327 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
LMNB2-201ENST00000325327 SPANXA2-OT1Q8N9U9 137 aa9.45□□□□□ -0.9
LMNB2-201ENST00000325327 UQCR11O14957 56 aa9.44□□□□□ -0.9
LMNB2-201ENST00000325327 KRTAP1-4P0C5Y4 121 aa9.43□□□□□ -0.9
LMNB2-201ENST00000325327 CSAG1Q6PB30 78 aa9.43□□□□□ -0.9
LMNB2-201ENST00000325327 SPINT4Q6UDR6 99 aa9.43□□□□□ -0.9
LMNB2-201ENST00000325327 KRTAP29-1A8MX34 341 aaPredicted RBP9.38□□□□□ -0.91
LMNB2-201ENST00000325327 S4R3F8 94 aa9.38□□□□□ -0.91
LMNB2-201ENST00000325327 A0A1B0GVY2 172 aa9.35□□□□□ -0.91
LMNB2-201ENST00000325327 RPS29P62273 56 aaKnown RBP9.34□□□□□ -0.91
LMNB2-201ENST00000325327 ASB16-AS1Q495Z4 193 aa9.33□□□□□ -0.92
LMNB2-201ENST00000325327 MIR22HGQ0VDD5 57 aa9.33□□□□□ -0.92
LMNB2-201ENST00000325327 DNHD1Q96M86 4753 aa9.29□□□□□ -0.92
LMNB2-201ENST00000325327 Q5XG85 94 aa9.26□□□□□ -0.93
LMNB2-201ENST00000325327 AKAP9Q99996 3911 aa9.26□□□□□ -0.93
LMNB2-201ENST00000325327 A0A1B0GU33 70 aa9.22□□□□□ -0.93
LMNB2-201ENST00000325327 CAMK2N1Q7Z7J9 78 aa9.22□□□□□ -0.93
LMNB2-201ENST00000325327 R4GN34 69 aa9.21□□□□□ -0.94
LMNB2-201ENST00000325327 RPL37P61927 97 aaKnown RBP9.2□□□□□ -0.94
LMNB2-201ENST00000325327 Q75L30 129 aa9.2□□□□□ -0.94
LMNB2-201ENST00000325327 Q1T7F1 81 aa9.14□□□□□ -0.95
LMNB2-201ENST00000325327 DMAC1Q96GE9 116 aa9.11□□□□□ -0.95
LMNB2-201ENST00000325327 XP32Q5T750 250 aa9.1□□□□□ -0.95
LMNB2-201ENST00000325327 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
LMNB2-201ENST00000325327 CDC42SE1Q9NRR8 79 aa9.09□□□□□ -0.95
LMNB2-201ENST00000325327 KTN1-AS1Q86SY8 53 aa9.06□□□□□ -0.96
LMNB2-201ENST00000325327 C20orf166-AS1Q96NR2 134 aa9.06□□□□□ -0.96
LMNB2-201ENST00000325327 M0QZ58 72 aa9.05□□□□□ -0.96
LMNB2-201ENST00000325327 H1FX-AS1Q4G0G2 97 aa9.05□□□□□ -0.96
LMNB2-201ENST00000325327 A8MUU9 505 aa9.04□□□□□ -0.96
LMNB2-201ENST00000325327 ADM2Q7Z4H4 148 aa9.03□□□□□ -0.96
LMNB2-201ENST00000325327 KRTAP10-8P60410 259 aa9.02□□□□□ -0.96
LMNB2-201ENST00000325327 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
LMNB2-201ENST00000325327 HUWE1Q7Z6Z7 4374 aaKnown RBP8.98□□□□□ -0.97
LMNB2-201ENST00000325327 LCA10Q71F78 164 aa8.97□□□□□ -0.97
LMNB2-201ENST00000325327 LINC01558Q9Y6Z2 57 aa8.97□□□□□ -0.97
LMNB2-201ENST00000325327 Q5VV11 94 aa8.96□□□□□ -0.97
LMNB2-201ENST00000325327 TPRXLQ17RH7 258 aa8.94□□□□□ -0.98
LMNB2-201ENST00000325327 SPATA8Q6RVD6 105 aa8.92□□□□□ -0.98
LMNB2-201ENST00000325327 KRTAP13-3Q3SY46 172 aa8.9□□□□□ -0.98
LMNB2-201ENST00000325327 PRAC1Q96KF2 57 aa8.87□□□□□ -0.99
LMNB2-201ENST00000325327 KRTAP4-5Q9BYR2 181 aa8.82□□□□□ -1
LMNB2-201ENST00000325327 DNAH9Q9NYC9 4486 aa8.79□□□□□ -1
LMNB2-201ENST00000325327 KRTAP16-1A8MUX0 517 aa8.78□□□□□ -1
LMNB2-201ENST00000325327 PLAC4Q8WY50 150 aa8.75□□□□□ -1.01
LMNB2-201ENST00000325327 A8MU10 97 aa8.69□□□□□ -1.02
LMNB2-201ENST00000325327 MT1HL1P0DM35 61 aa8.62□□□□□ -1.03
LMNB2-201ENST00000325327 PLECQ15149 4684 aaKnown RBP8.61□□□□□ -1.03
LMNB2-201ENST00000325327 PRKDCP78527 4128 aaKnown RBP8.59□□□□□ -1.03
LMNB2-201ENST00000325327 KRTAP10-10P60014 251 aa8.57□□□□□ -1.04
LMNB2-201ENST00000325327 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
LMNB2-201ENST00000325327 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
LMNB2-201ENST00000325327 DNAH11Q96DT5 4516 aa8.48□□□□□ -1.05
LMNB2-201ENST00000325327 H3BS24 57 aa8.48□□□□□ -1.05
LMNB2-201ENST00000325327 STARD9Q9P2P6 4700 aa8.43□□□□□ -1.06
LMNB2-201ENST00000325327 ROMO1P60602 79 aa8.41□□□□□ -1.06
LMNB2-201ENST00000325327 LUZP6Q538Z0 58 aa8.4□□□□□ -1.07
LMNB2-201ENST00000325327 FAT1Q14517 4588 aa8.39□□□□□ -1.07
LMNB2-201ENST00000325327 P0C880 135 aa8.38□□□□□ -1.07
LMNB2-201ENST00000325327 KIAA1109Q2LD37 5005 aa8.36□□□□□ -1.07
LMNB2-201ENST00000325327 DNAH1Q9P2D7 4330 aa8.35□□□□□ -1.07
LMNB2-201ENST00000325327 RYR1P21817 5038 aa8.34□□□□□ -1.07
LMNB2-201ENST00000325327 A6NN06 94 aa8.32□□□□□ -1.08
LMNB2-201ENST00000325327 DNAH10Q8IVF4 4471 aa8.29□□□□□ -1.08
LMNB2-201ENST00000325327 DYNC1H1Q14204 4646 aaKnown RBP8.27□□□□□ -1.09
LMNB2-201ENST00000325327 ANK2Q01484 3957 aa8.27□□□□□ -1.09
LMNB2-201ENST00000325327 ALMS1Q8TCU4 4167 aa8.22□□□□□ -1.09
LMNB2-201ENST00000325327 VPS13DQ5THJ4 4388 aa8.21□□□□□ -1.1
LMNB2-201ENST00000325327 LRP1BQ9NZR2 4599 aa8.2□□□□□ -1.1
LMNB2-201ENST00000325327 LYSTQ99698 3801 aa8.18□□□□□ -1.1
LMNB2-201ENST00000325327 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
LMNB2-201ENST00000325327 RYR3Q15413 4870 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms