RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 CYP4F30PQ9H0H9 118 aa4.37□□□□□ -1.71
PSEN1-201ENST00000324501 DMBT1Q9UGM3 2413 aaPredicted RBP4.36□□□□□ -1.71
PSEN1-201ENST00000324501 LINC01554Q52M75 96 aa4.36□□□□□ -1.71
PSEN1-201ENST00000324501 KRTAP11-1Q8IUC1 163 aa4.35□□□□□ -1.71
PSEN1-201ENST00000324501 A0A0D9SG42 100 aa4.34□□□□□ -1.71
PSEN1-201ENST00000324501 MMP24-AS1A0A0U1RRL7 71 aa4.34□□□□□ -1.71
PSEN1-201ENST00000324501 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
PSEN1-201ENST00000324501 M0R2T5 61 aa4.34□□□□□ -1.71
PSEN1-201ENST00000324501 SPANXA2-OT1Q8N9U9 137 aa4.32□□□□□ -1.72
PSEN1-201ENST00000324501 Q6ZRN7 208 aaPredicted RBP4.32□□□□□ -1.72
PSEN1-201ENST00000324501 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
PSEN1-201ENST00000324501 A0A087X002 238 aa4.31□□□□□ -1.72
PSEN1-201ENST00000324501 HRES1P13985 223 aa4.31□□□□□ -1.72
PSEN1-201ENST00000324501 SPRR1BP22528 89 aa4.31□□□□□ -1.72
PSEN1-201ENST00000324501 ZCCHC13Q8WW36 166 aaKnown RBP4.3□□□□□ -1.72
PSEN1-201ENST00000324501 LINC00472Q9H8W2 130 aa4.3□□□□□ -1.72
PSEN1-201ENST00000324501 RPS29P62273 56 aaKnown RBP4.3□□□□□ -1.72
PSEN1-201ENST00000324501 MIR22HGQ0VDD5 57 aa4.3□□□□□ -1.72
PSEN1-201ENST00000324501 KRTAP7-1Q8IUC3 87 aa4.3□□□□□ -1.72
PSEN1-201ENST00000324501 KRTAP4-16G5E9R7 235 aaPredicted RBP4.3□□□□□ -1.72
PSEN1-201ENST00000324501 LINC00483Q53H64 154 aa4.3□□□□□ -1.72
PSEN1-201ENST00000324501 UQCR11O14957 56 aa4.29□□□□□ -1.72
PSEN1-201ENST00000324501 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
PSEN1-201ENST00000324501 Q5W150 140 aa4.27□□□□□ -1.73
PSEN1-201ENST00000324501 COL7A1Q02388 2944 aa4.27□□□□□ -1.73
PSEN1-201ENST00000324501 CYSTM1Q9H1C7 97 aa4.26□□□□□ -1.73
PSEN1-201ENST00000324501 S4R3F8 94 aa4.24□□□□□ -1.73
PSEN1-201ENST00000324501 SPINK7P58062 85 aa4.24□□□□□ -1.73
PSEN1-201ENST00000324501 Q1T7F1 81 aa4.24□□□□□ -1.73
PSEN1-201ENST00000324501 FBN3Q75N90 2809 aa4.23□□□□□ -1.73
PSEN1-201ENST00000324501 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
PSEN1-201ENST00000324501 CSAG1Q6PB30 78 aa4.2□□□□□ -1.74
PSEN1-201ENST00000324501 CDC42SE1Q9NRR8 79 aa4.2□□□□□ -1.74
PSEN1-201ENST00000324501 FLG2Q5D862 2391 aaPredicted RBP4.2□□□□□ -1.74
PSEN1-201ENST00000324501 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
PSEN1-201ENST00000324501 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
PSEN1-201ENST00000324501 KRTAP13-2Q52LG2 175 aa4.18□□□□□ -1.74
PSEN1-201ENST00000324501 Q5XG85 94 aa4.17□□□□□ -1.74
PSEN1-201ENST00000324501 A0A1B0GU33 70 aa4.16□□□□□ -1.74
PSEN1-201ENST00000324501 ANK3Q12955 4377 aaKnown RBP4.15□□□□□ -1.74
PSEN1-201ENST00000324501 Q75L30 129 aa4.15□□□□□ -1.75
PSEN1-201ENST00000324501 KRTAP13-1Q8IUC0 172 aa4.15□□□□□ -1.75
PSEN1-201ENST00000324501 LCA10Q71F78 164 aa4.14□□□□□ -1.75
PSEN1-201ENST00000324501 ASB16-AS1Q495Z4 193 aa4.14□□□□□ -1.75
PSEN1-201ENST00000324501 MEGF8Q7Z7M0 2845 aa4.13□□□□□ -1.75
PSEN1-201ENST00000324501 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
PSEN1-201ENST00000324501 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
PSEN1-201ENST00000324501 KRTAP29-1A8MX34 341 aaPredicted RBP4.12□□□□□ -1.75
PSEN1-201ENST00000324501 DNHD1Q96M86 4753 aa4.11□□□□□ -1.75
PSEN1-201ENST00000324501 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
PSEN1-201ENST00000324501 AKAP9Q99996 3911 aa4.08□□□□□ -1.76
PSEN1-201ENST00000324501 ADM2Q7Z4H4 148 aa4.07□□□□□ -1.76
PSEN1-201ENST00000324501 R4GN34 69 aa4.07□□□□□ -1.76
PSEN1-201ENST00000324501 Q5VV11 94 aa4.07□□□□□ -1.76
PSEN1-201ENST00000324501 DMAC1Q96GE9 116 aa4.06□□□□□ -1.76
PSEN1-201ENST00000324501 SPATA8Q6RVD6 105 aa4.05□□□□□ -1.76
PSEN1-201ENST00000324501 M0QZ58 72 aa4.04□□□□□ -1.76
PSEN1-201ENST00000324501 CSMD3Q7Z407 3707 aa4.03□□□□□ -1.76
PSEN1-201ENST00000324501 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
PSEN1-201ENST00000324501 RPL37P61927 97 aaKnown RBP4.01□□□□□ -1.77
PSEN1-201ENST00000324501 H1FX-AS1Q4G0G2 97 aa4.01□□□□□ -1.77
PSEN1-201ENST00000324501 KRTAP1-4P0C5Y4 121 aa4.01□□□□□ -1.77
PSEN1-201ENST00000324501 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
PSEN1-201ENST00000324501 TPRXLQ17RH7 258 aa3.98□□□□□ -1.77
PSEN1-201ENST00000324501 A0A1B0GVY2 172 aa3.96□□□□□ -1.77
PSEN1-201ENST00000324501 A8MU10 97 aa3.93□□□□□ -1.78
PSEN1-201ENST00000324501 C20orf166-AS1Q96NR2 134 aa3.93□□□□□ -1.78
PSEN1-201ENST00000324501 A8MUU9 505 aa3.92□□□□□ -1.78
PSEN1-201ENST00000324501 XP32Q5T750 250 aa3.92□□□□□ -1.78
PSEN1-201ENST00000324501 ROMO1P60602 79 aa3.89□□□□□ -1.79
PSEN1-201ENST00000324501 HUWE1Q7Z6Z7 4374 aaKnown RBP3.88□□□□□ -1.79
PSEN1-201ENST00000324501 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
PSEN1-201ENST00000324501 KRTAP16-1A8MUX0 517 aa3.83□□□□□ -1.8
PSEN1-201ENST00000324501 A6NN06 94 aa3.82□□□□□ -1.8
PSEN1-201ENST00000324501 KRTAP10-8P60410 259 aa3.82□□□□□ -1.8
PSEN1-201ENST00000324501 KRTAP13-3Q3SY46 172 aa3.81□□□□□ -1.8
PSEN1-201ENST00000324501 PRKDCP78527 4128 aaKnown RBP3.79□□□□□ -1.8
PSEN1-201ENST00000324501 HYDINQ4G0P3 5121 aa3.78□□□□□ -1.8
PSEN1-201ENST00000324501 PRO2289Q9P1D8 64 aa3.77□□□□□ -1.81
PSEN1-201ENST00000324501 ANK2Q01484 3957 aa3.75□□□□□ -1.81
PSEN1-201ENST00000324501 H3BS24 57 aa3.74□□□□□ -1.81
PSEN1-201ENST00000324501 ALMS1Q8TCU4 4167 aa3.72□□□□□ -1.81
PSEN1-201ENST00000324501 KRTAP25-1Q3LHN0 102 aa3.71□□□□□ -1.81
PSEN1-201ENST00000324501 KRTAP10-10P60014 251 aa3.71□□□□□ -1.82
PSEN1-201ENST00000324501 DNAH9Q9NYC9 4486 aa3.68□□□□□ -1.82
PSEN1-201ENST00000324501 KMT2CQ8NEZ4 4911 aaKnown RBP3.67□□□□□ -1.82
PSEN1-201ENST00000324501 P0C880 135 aa3.66□□□□□ -1.82
PSEN1-201ENST00000324501 H0YAA0 97 aa3.66□□□□□ -1.82
PSEN1-201ENST00000324501 TNP1P09430 55 aa3.65□□□□□ -1.83
PSEN1-201ENST00000324501 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.83
PSEN1-201ENST00000324501 KRTAP4-5Q9BYR2 181 aa3.64□□□□□ -1.83
PSEN1-201ENST00000324501 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
PSEN1-201ENST00000324501 LYSTQ99698 3801 aa3.61□□□□□ -1.83
PSEN1-201ENST00000324501 STARD9Q9P2P6 4700 aa3.59□□□□□ -1.84
PSEN1-201ENST00000324501 PLECQ15149 4684 aaKnown RBP3.58□□□□□ -1.84
PSEN1-201ENST00000324501 DNAH1Q9P2D7 4330 aa3.56□□□□□ -1.84
PSEN1-201ENST00000324501 MT1HL1P0DM35 61 aa3.56□□□□□ -1.84
PSEN1-201ENST00000324501 CMYA5Q8N3K9 4069 aa3.56□□□□□ -1.84
PSEN1-201ENST00000324501 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
PSEN1-201ENST00000324501 KRTAP3-1Q9BYR8 98 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms